Episomal HIV-1 DNA and its relationship to other markers of HIV-1 persistence
Martinez-Picado, Javier, Zurakowski, Ryan, Buzón, María José, Stevenson, Mario
Published in Retrovirology (30.01.2018)
Published in Retrovirology (30.01.2018)
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Journal Article
HIV model parameter estimates from interruption trial data including drug efficacy and reservoir dynamics
Luo, Rutao, Piovoso, Michael J, Martinez-Picado, Javier, Zurakowski, Ryan
Published in PloS one (16.07.2012)
Published in PloS one (16.07.2012)
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Journal Article
HIV 2-LTR experiment design optimization
Cannon, LaMont, Vargas-Garcia, Cesar A, Jagarapu, Aditya, Piovoso, Michael J, Zurakowski, Ryan
Published in PloS one (08.11.2018)
Published in PloS one (08.11.2018)
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Journal Article
Persistence of an intact HIV reservoir in phenotypically naive T cells
Venanzi Rullo, Emmanuele, Pinzone, Marilia Rita, Cannon, LaMont, Weissman, Sam, Ceccarelli, Manuela, Zurakowski, Ryan, Nunnari, Giuseppe, O'Doherty, Una
Published in JCI insight (15.10.2020)
Published in JCI insight (15.10.2020)
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Journal Article
Naive infection predicts reservoir diversity and is a formidable hurdle to HIV eradication
Pinzone, Marilia R, Weissman, Sam, Pasternak, Alexander O, Zurakowski, Ryan, Migueles, Stephen, O'Doherty, Una
Published in JCI insight (23.08.2021)
Published in JCI insight (23.08.2021)
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Journal Article
Modeling Uncertainty in Single-Copy Assays for HIV
RUTAO LUO, PIOVOSO, Michael J, ZURAKOWSKI, Ryan
Published in Journal of Clinical Microbiology (01.10.2012)
Published in Journal of Clinical Microbiology (01.10.2012)
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Journal Article
Significant Unresolved Questions and Opportunities for Bioengineering in Understanding and Treating COVID-19 Disease Progression
Shirazi, Jasmine, Donzanti, Michael J., Nelson, Katherine M., Zurakowski, Ryan, Fromen, Catherine A., Gleghorn, Jason P.
Published in Cellular and molecular bioengineering (01.08.2020)
Published in Cellular and molecular bioengineering (01.08.2020)
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Journal Article
Optimal antiviral switching to minimize resistance risk in HIV therapy
Luo, Rutao, Piovoso, Michael J, Martinez-Picado, Javier, Zurakowski, Ryan
Published in PloS one (03.11.2011)
Published in PloS one (03.11.2011)
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Journal Article
The Tobit Kalman Filter: An Estimator for Censored Measurements
Allik, Bethany, Miller, Cory, Piovoso, Michael J., Zurakowski, Ryan
Published in IEEE transactions on control systems technology (01.01.2016)
Published in IEEE transactions on control systems technology (01.01.2016)
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Journal Article
Synaptic transmission may provide an evolutionary benefit to HIV through modulation of latency
Vargas-Garcia, Cesar, Zurakowski, Ryan, Singh, Abhyudai
Published in Journal of theoretical biology (14.10.2018)
Published in Journal of theoretical biology (14.10.2018)
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Journal Article
Ballistic Roll Estimation using EKF Frequency Tracking and Adaptive Noise Cancellation
Allik, Bethany, Ilg, Mark, Zurakowski, Ryan
Published in IEEE transactions on aerospace and electronic systems (01.10.2013)
Published in IEEE transactions on aerospace and electronic systems (01.10.2013)
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Journal Article
Long-term antiretroviral treatment initiated at primary HIV-1 infection affects the size, composition, and decay kinetics of the reservoir of HIV-1-infected CD4 T cells
Buzon, Maria J, Martin-Gayo, Enrique, Pereyra, Florencia, Ouyang, Zhengyu, Sun, Hong, Li, Jonathan Z, Piovoso, Michael, Shaw, Amy, Dalmau, Judith, Zangger, Nadine, Martinez-Picado, Javier, Zurakowski, Ryan, Yu, Xu G, Telenti, Amalio, Walker, Bruce D, Rosenberg, Eric S, Lichterfeld, Mathias
Published in Journal of virology (01.09.2014)
Published in Journal of virology (01.09.2014)
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Journal Article
Next-Generation Sequencing in a Direct Model of HIV Infection Reveals Important Parallels to and Differences from In Vivo Reservoir Dynamics
Pinzone, Marilia Rita, Bertuccio, Maria Paola, VanBelzen, D Jake, Zurakowski, Ryan, O'Doherty, Una
Published in Journal of virology (16.04.2020)
Published in Journal of virology (16.04.2020)
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Journal Article
Ballistic Roll Estimation using EKF Frequency Tracking and Adaptive Noise Cancellation
Allik, Bethany, Ilg, Mark, Zurakowski, Ryan
Published in IEEE transactions on aerospace and electronic systems (01.10.2014)
Published in IEEE transactions on aerospace and electronic systems (01.10.2014)
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Journal Article