A Novel Cryptic Clostridial Peptide That Kills Bacteria by a Cell Membrane Permeabilization Mechanism
Szadkowska, Monika, Olewniczak, Michal, Kloska, Anna, Jankowska, Elzbieta, Kapusta, Malgorzata, Rybak, Bartosz, Wyrzykowski, Dariusz, Zmudzinska, Wioletta, Gieldon, Artur, Kocot, Aleksandra, Kaczorowska, Anna-Karina, Nierzwicki, Lukasz, Makowska, Joanna, Kaczorowski, Tadeusz, Plotka, Magdalena
Published in Microbiology spectrum (26.10.2022)
Published in Microbiology spectrum (26.10.2022)
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Conformation-dependent affinity of Cu(II) ions peptide complexes derived from the human Pin1 protein: ITC and DSC study
Uber, Dorota, Wyrzykowski, Dariusz, Tiberi, Caterina, Sabatino, Giuseppina, Żmudzińska, Wioletta, Chmurzyński, Lech, Papini, Anna Maria, Makowska, Joanna
Published in Journal of thermal analysis and calorimetry (01.02.2017)
Published in Journal of thermal analysis and calorimetry (01.02.2017)
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Journal Article
Conformation-dependent affinity of Cu ions peptide complexes derived from the human Pin1 protein
Uber, Dorota, Wyrzykowski, Dariusz, Tiberi, Caterina, Sabatino, Giuseppina, Zmudzinska, Wioletta, Chmurzynski, Lech, Papini, Anna Maria
Published in Journal of thermal analysis and calorimetry (01.02.2017)
Published in Journal of thermal analysis and calorimetry (01.02.2017)
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A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. III. Determination of scale-consistent backbone-local and correlation potentials in the UNRES force field and force-field calibration and validation
Liwo, Adam, Sieradzan, Adam K, Lipska, Agnieszka G, Czaplewski, Cezary, Joung, InSuk, Żmudzińska, Wioletta, Hałabis, Anna, Ołdziej, Stanisław
Published in The Journal of chemical physics (21.04.2019)
Published in The Journal of chemical physics (21.04.2019)
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Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics
Krupa, Paweł, Hałabis, Anna, Żmudzińska, Wioletta, Ołdziej, Stanisław, Scheraga, Harold A, Liwo, Adam
Published in Journal of chemical information and modeling (25.09.2017)
Published in Journal of chemical information and modeling (25.09.2017)
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Journal Article
Conformational Dynamics of the Trp-Cage Miniprotein at Its Folding Temperature
Hałabis, Anna, Żmudzińska, Wioletta, Liwo, Adam, Ołdziej, Stanisław
Published in The journal of physical chemistry. B (14.06.2012)
Published in The journal of physical chemistry. B (14.06.2012)
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A Maximum-Likelihood Approach to Force-Field Calibration
Zaborowski, Bartłomiej, Jagieła, Dawid, Czaplewski, Cezary, Hałabis, Anna, Lewandowska, Agnieszka, Żmudzińska, Wioletta, Ołdziej, Stanisław, Karczyńska, Agnieszka, Omieczynski, Christian, Wirecki, Tomasz, Liwo, Adam
Published in Journal of chemical information and modeling (28.09.2015)
Published in Journal of chemical information and modeling (28.09.2015)
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An iron fist in a velvet glove: The cooperation of a novel pyoverdine from Pseudomonas donghuensis P482 with 7‐hydroxytropolone is pivotal for its antibacterial activity
Jafra, Sylwia, Jabłońska, Magdalena, Maciąg, Tomasz, Matuszewska, Marta, Borowicz, Marcin, Prusiński, Michał, Żmudzińska, Wioletta, Thiel, Marcel, Czaplewska, Paulina, Krzyżanowska, Dorota M., Czajkowski, Robert
Published in Environmental microbiology (01.01.2024)
Published in Environmental microbiology (01.01.2024)
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Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics
Krupa, Paweł, Hałabis, Anna, Żmudzińska, Wioletta, Ołdziej, Stanisław, Scheraga, Harold A, Liwo, Adam
Published in Journal of chemical information and modeling (22.01.2018)
Published in Journal of chemical information and modeling (22.01.2018)
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Probing the binding of Cu2+ ions to a fragment of the Aβ(1–42) polypeptide using fluorescence spectroscopy, isothermal titration calorimetry and molecular dynamics simulations
Makowska, Joanna, Żamojć, Krzysztof, Wyrzykowski, Dariusz, Żmudzińska, Wioletta, Uber, Dorota, Wierzbicka, Małgorzata, Wiczk, Wiesław, Chmurzyński, Lech
Published in Biophysical chemistry (01.09.2016)
Published in Biophysical chemistry (01.09.2016)
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Characteristics of C‐terminal, β‐amyloid peptide binding fragment of neuroprotective protease inhibitor, cystatin C
Spodzieja, Marta, Kalejta, Katarzyna, Kołodziejczyk, Aleksandra S., Maszota‐Zieleniak, Martyna, Rodziewicz‐Motowidło, Sylwia, Żmudzińska, Wioletta, Czaplewska, Paulina
Published in Journal of molecular recognition (01.02.2017)
Published in Journal of molecular recognition (01.02.2017)
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Mechanism of formation of the C‐terminal β‐hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. II. Interplay of local backbone conformational dynamics and long‐range hydrophobic interactions in hairpin formation
Skwierawska, Agnieszka, Żmudzińska, Wioletta, Ołdziej, Stanisław, Liwo, Adam, Scheraga, Harold A.
Published in Proteins, structure, function, and bioinformatics (15.08.2009)
Published in Proteins, structure, function, and bioinformatics (15.08.2009)
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Journal Article
Conformation-dependent affinity of Cu
Uber, Dorota, Wyrzykowski, Dariusz, Tiberi, Caterina, Sabatino, Giuseppina, Zmudzinska, Wioletta, Chmurzynski, Lech, Papini, Anna Maria
Published in Journal of thermal analysis and calorimetry (01.02.2017)
Published in Journal of thermal analysis and calorimetry (01.02.2017)
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Journal Article
Probing the binding of Cu(2+) ions to a fragment of the Aβ(1-42) polypeptide using fluorescence spectroscopy, isothermal titration calorimetry and molecular dynamics simulations
Makowska, Joanna, Żamojć, Krzysztof, Wyrzykowski, Dariusz, Żmudzińska, Wioletta, Uber, Dorota, Wierzbicka, Małgorzata, Wiczk, Wiesław, Chmurzyński, Lech
Published in Biophysical chemistry (01.09.2016)
Published in Biophysical chemistry (01.09.2016)
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Journal Article
Probing the binding of Cu 2+ ions to a fragment of the Aβ (1–42) polypeptide using fluorescence spectroscopy, isothermal titration calorimetry and molecular dynamics simulations
Makowska, Joanna, Żamojć, Krzysztof, Wyrzykowski, Dariusz, Żmudzińska, Wioletta, Uber, Dorota, Wierzbicka, Małgorzata, Wiczk, Wiesław, Chmurzyński, Lech
Published in Biophysical chemistry (01.09.2016)
Published in Biophysical chemistry (01.09.2016)
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Journal Article
Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics
Krupa, Paweł, Hałabis, Anna, Żmudzińska, Wioletta, Ołdziej, Stanisław, Scheraga, Harold A, Liwo, Adam
Published in Journal of chemical information and modeling (28.12.2017)
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Published in Journal of chemical information and modeling (28.12.2017)
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