Oncofinder, a new method for the analysis of intracellular signaling pathway activation using transcriptomic data
Buzdin, Anton A, Zhavoronkov, Alex A, Korzinkin, Mikhail B, Venkova, Larisa S, Zenin, Alexander A, Smirnov, Philip Yu, Borisov, Nikolay M
Published in Frontiers in genetics (25.03.2014)
Published in Frontiers in genetics (25.03.2014)
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A systematic experimental evaluation of microRNA markers of human bladder cancer
Zabolotneva, Anastasia A, Zhavoronkov, Alex A, Shegay, Peter V, Gaifullin, Nurshat M, Alekseev, Boris Y, Roumiantsev, Sergey A, Garazha, Andrew V, Kovalchuk, Olga, Aravin, Alexey, Buzdin, Anton A
Published in Frontiers in genetics (01.01.2013)
Published in Frontiers in genetics (01.01.2013)
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Bioinformatics Meets Biomedicine: OncoFinder, a Quantitative Approach for Interrogating Molecular Pathways Using Gene Expression Data
Buzdin, Anton A, Prassolov, Vladimir, Zhavoronkov, Alex A, Borisov, Nikolay M
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
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Molecular aspects of development and regulation of endometriosis
Aznaurova, Yana B, Zhumataev, Marat B, Roberts, Tiffany K, Aliper, Alexander M, Zhavoronkov, Alex A
Published in Reproductive biology and endocrinology (13.06.2014)
Published in Reproductive biology and endocrinology (13.06.2014)
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Signaling pathways activation profiles make better markers of cancer than expression of individual genes
Borisov, Nikolay M, Terekhanova, Nadezhda V, Aliper, Alexander M, Venkova, Larisa S, Smirnov, Philip Yu, Roumiantsev, Sergey, Korzinkin, Mikhail B, Zhavoronkov, Alex A, Buzdin, Anton A
Published in Oncotarget (30.10.2014)
Published in Oncotarget (30.10.2014)
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Mathematical Justification of Expression-Based Pathway Activation Scoring (PAS)
Aliper, Alexander M, Korzinkin, Michael B, Kuzmina, Natalia B, Zenin, Alexander A, Venkova, Larisa S, Smirnov, Philip Yu, Zhavoronkov, Alex A, Buzdin, Anton A, Borisov, Nikolay M
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
Published in Methods in molecular biology (Clifton, N.J.) (01.01.2017)
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Journal Article
Early stage of cytomegalovirus infection suppresses host microRNA expression regulation in human fibroblasts
Buzdin, Anton A, Artcibasova, Alina V, Fedorova, Natalya F, Suntsova, Maria V, Garazha, Andrew V, Sorokin, Maxim I, Allina, Daria, Shalatonin, Mikhail, Borisov, Nikolay M, Zhavoronkov, Alex A, Kovalchuk, Igor, Kovalchuk, Olga, Kushch, Alla A
Published in Cell cycle (Georgetown, Tex.) (16.12.2016)
Published in Cell cycle (Georgetown, Tex.) (16.12.2016)
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MiRImpact, a new bioinformatic method using complete microRNA expression profiles to assess their overall influence on the activity of intracellular molecular pathways
Artcibasova, Alina V, Korzinkin, Mikhail B, Sorokin, Maksim I, Shegay, Peter V, Zhavoronkov, Alex A, Gaifullin, Nurshat, Alekseev, Boris Y, Vorobyev, Nikolay V, Kuzmin, Denis V, Kaprin, Аndrey D, Borisov, Nikolay M, Buzdin, Anton A
Published in Cell cycle (Georgetown, Tex.) (03.03.2016)
Published in Cell cycle (Georgetown, Tex.) (03.03.2016)
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Pathway activation strength is a novel independent prognostic biomarker for cetuximab sensitivity in colorectal cancer patients
Zhu, Qingsong, Izumchenko, Evgeny, Aliper, Alexander M, Makarev, Evgeny, Paz, Keren, Buzdin, Anton A, Zhavoronkov, Alex A, Sidransky, David
Published in Human genome variation (02.04.2015)
Published in Human genome variation (02.04.2015)
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Journal Article
The OncoFinder algorithm for minimizing the errors introduced by the high-throughput methods of transcriptome analysis
Buzdin, Anton A, Zhavoronkov, Alex A, Korzinkin, Mikhail B, Roumiantsev, Sergey A, Aliper, Alexander M, Venkova, Larisa S, Smirnov, Philip Y, Borisov, Nikolay M
Published in Frontiers in molecular biosciences (26.08.2014)
Published in Frontiers in molecular biosciences (26.08.2014)
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Journal Article
Early stage of cytomegalovirus infection suppresses host microRNA expression regulation in human fibroblasts
Buzdin, Anton A., Artcibasova, Alina V., Fedorova, Natalya F., Suntsova, Maria V., Garazha, Andrew V., Sorokin, Maxim I., Allina, Daria, Shalatonin, Mikhail, Borisov, Nikolay M., Zhavoronkov, Alex A., Kovalchuk, Igor, Kovalchuk, Olga, Kushch, Alla A.
Published in Cell Cycle (16.12.2016)
Published in Cell Cycle (16.12.2016)
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MiRImpact, a new bioinformatic method using complete microRNA expression profiles to assess their overall influence on the activity of intracellular molecular pathways
Artcibasova, Alina V., Korzinkin, Mikhail B., Sorokin, Maksim I., Shegay, Peter V., Zhavoronkov, Alex A., Gaifullin, Nurshat, Alekseev, Boris Y., Vorobyev, Nikolay V., Kuzmin, Denis V., Kaprin, Аndrey D., Borisov, Nikolay M., Buzdin, Anton A.
Published in Cell Cycle (03.03.2016)
Published in Cell Cycle (03.03.2016)
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