Canine tumor mutational burden is correlated with TP53 mutation across tumor types and breeds
Alsaihati, Burair A, Ho, Kun-Lin, Watson, Joshua, Feng, Yuan, Wang, Tianfang, Dobbin, Kevin K, Zhao, Shaying
Published in Nature communications (03.08.2021)
Published in Nature communications (03.08.2021)
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Journal Article
Molecular homology and difference between spontaneous canine mammary cancer and human breast cancer
Liu, Deli, Xiong, Huan, Ellis, Angela E, Northrup, Nicole C, Rodriguez, Jr, Carlos O, O'Regan, Ruth M, Dalton, Stephen, Zhao, Shaying
Published in Cancer research (Chicago, Ill.) (15.09.2014)
Published in Cancer research (Chicago, Ill.) (15.09.2014)
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Journal Article
Shared hotspot mutations in oncogenes position dogs as an unparalleled comparative model for precision therapeutics
Rodrigues, Lucas, Watson, Joshua, Feng, Yuan, Lewis, Benjamin, Harvey, Garrett, Post, Gerald, Megquier, Kate, White, Michelle E, Lambert, Lindsay, Miller, Aubrey, Lopes, Christina, Zhao, Shaying
Published in Scientific reports (06.07.2023)
Published in Scientific reports (06.07.2023)
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Journal Article
Cell-Cycle Control of Bivalent Epigenetic Domains Regulates the Exit from Pluripotency
Singh, Amar M., Sun, Yuhua, Li, Li, Zhang, Wenjuan, Wu, Tianming, Zhao, Shaying, Qin, Zhaohui, Dalton, Stephen
Published in Stem cell reports (08.09.2015)
Published in Stem cell reports (08.09.2015)
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Journal Article
Cell-Cycle Control of Developmentally Regulated Transcription Factors Accounts for Heterogeneity in Human Pluripotent Cells
Singh, Amar M., Chappell, James, Trost, Robert, Lin, Li, Wang, Tao, Tang, Jie, Wu, Hao, Zhao, Shaying, Jin, Peng, Dalton, Stephen
Published in Stem cell reports (17.12.2013)
Published in Stem cell reports (17.12.2013)
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Journal Article
A Kmer-based paired-end read de novo assembler and genotyper for canine MHC class I genotyping
Feng, Yuan, Hess, Paul R., Tompkins, Stephen M., Hildebrand, William H., Zhao, Shaying
Published in iScience (17.02.2023)
Published in iScience (17.02.2023)
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Journal Article
Comparative analysis of Alu repeats in primate genomes
Liu, George E, Alkan, Can, Jiang, Lu, Zhao, Shaying, Eichler, Evan E
Published in Genome Research (01.05.2009)
Published in Genome Research (01.05.2009)
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Journal Article
Phylogenomics of nonavian reptiles and the structure of the ancestral amniote genome
Shedlock, Andrew M, Botka, Christopher W, Zhao, Shaying, Shetty, Jyoti, Zhang, Tingting, Liu, Jun S, Deschavanne, Patrick J, Edwards, Scott V
Published in Proceedings of the National Academy of Sciences - PNAS (20.02.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (20.02.2007)
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Journal Article
Proliferative and Invasive Colorectal Tumors in Pet Dogs Provide Unique Insights into Human Colorectal Cancer
Wang, Jin, Wang, Tianfang, Sun, Yanfang, Feng, Yuan, Kisseberth, William C, Henry, Carolyn J, Mok, Irene, Lana, Susan E, Dobbin, Kevin, Northrup, Nicole, Howerth, Elizabeth W, Zhao, Shaying
Published in Cancers (14.09.2018)
Published in Cancers (14.09.2018)
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Journal Article
Stepwise evolution of two giant composite LTR-retrotransposon-like elements DA and Xiao
Li, Xuanyang, Slife, Jennifer, Patel, Neil, Zhao, Shaying
Published in BMC evolutionary biology (05.06.2009)
Published in BMC evolutionary biology (05.06.2009)
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Journal Article
Frequent alteration of the tumor suppressor gene APC in sporadic canine colorectal tumors
Youmans, Lydia, Taylor, Cynthia, Shin, Edwin, Harrell, Adrienne, Ellis, Angela E, Séguin, Bernard, Ji, Xinglai, Zhao, Shaying
Published in PloS one (10.12.2012)
Published in PloS one (10.12.2012)
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Journal Article
A Qualitative Change in the Transcriptome Occurs after the First Cell Cycle and Coincides with Lumen Establishment during MDCKII Cystogenesis
Wang, Tianfang, Kwon, Sang-Ho, Peng, Xiao, Urdy, Severine, Lu, Zefu, Schmitz, Robert J., Dalton, Stephen, Mostov, Keith E., Zhao, Shaying
Published in iScience (23.10.2020)
Published in iScience (23.10.2020)
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Journal Article
SEG - A Software Program for Finding Somatic Copy Number Alterations in Whole Genome Sequencing Data of Cancer
Zhang, Mucheng, Liu, Deli, Tang, Jie, Feng, Yuan, Wang, Tianfang, Dobbin, Kevin K., Schliekelman, Paul, Zhao, Shaying
Published in Computational and structural biotechnology journal (01.01.2018)
Published in Computational and structural biotechnology journal (01.01.2018)
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Journal Article
A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications
She, Xinwei, Liu, Ge, Ventura, Mario, Zhao, Shaying, Misceo, Doriana, Roberto, Roberta, Cardone, Maria Francesca, Rocchi, Mariano, Green, Eric D, Archidiacano, Nicoletta, Eichler, Evan E
Published in Genome Research (01.05.2006)
Published in Genome Research (01.05.2006)
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Journal Article
Construction and sequence sampling of deep-coverage, large-insert BAC libraries for three model lepidopteran species
Wu, Chengcang, Proestou, Dina, Carter, Dorothy, Nicholson, Erica, Santos, Filippe, Zhao, Shaying, Zhang, Hong-Bin, Goldsmith, Marian R
Published in BMC genomics (26.06.2009)
Published in BMC genomics (26.06.2009)
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Journal Article
End-Sequence Profiling: Sequence-Based Analysis of Aberrant Genomes
Volik, Stanislav, Zhao, Shaying, Chin, Koei, Brebner, John H., Herndon, David R., Tao, Quanzhou, Kowbel, David, Huang, Guiqing, Lapuk, Anna, Kuo, Wen-Lin, Magrane, Gregg, de Jong, Pieter, Gray, Joe W., Collins, Colin
Published in Proceedings of the National Academy of Sciences - PNAS (24.06.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (24.06.2003)
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