Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data
Zhao, Yifan, Cai, Huiyu, Zhang, Zuobai, Tang, Jian, Li, Yue
Published in Nature communications (06.09.2021)
Published in Nature communications (06.09.2021)
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Journal Article
Publisher Correction: Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data
Zhao, Yifan, Cai, Huiyu, Zhang, Zuobai, Tang, Jian, Li, Yue
Published in Nature communications (01.10.2021)
Published in Nature communications (01.10.2021)
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Journal Article
Author Correction: Pretrainable geometric graph neural network for antibody affinity maturation
Cai, Huiyu, Zhang, Zuobai, Wang, Mingkai, Zhong, Bozitao, Li, Quanxiao, Zhong, Yuxuan, Wu, Yanling, Ying, Tianlei, Tang, Jian
Published in Nature communications (07.10.2024)
Published in Nature communications (07.10.2024)
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Journal Article
Pretrainable geometric graph neural network for antibody affinity maturation
Cai, Huiyu, Zhang, Zuobai, Wang, Mingkai, Zhong, Bozitao, Li, Quanxiao, Zhong, Yuxuan, Wu, Yanling, Ying, Tianlei, Tang, Jian
Published in Nature communications (06.09.2024)
Published in Nature communications (06.09.2024)
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Journal Article
Biharmonic Distance-Based Performance Metric for Second-Order Noisy Consensus Networks
Yi, Yuhao, Yang, Bingjia, Zhang, Zuobai, Zhang, Zhongzhi, Patterson, Stacy
Published in IEEE transactions on information theory (01.02.2022)
Published in IEEE transactions on information theory (01.02.2022)
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Journal Article
Opinion dynamics in social networks incorporating higher-order interactions
Zhang, Zuobai, Xu, Wanyue, Zhang, Zhongzhi, Chen, Guanrong
Published in Data mining and knowledge discovery (01.11.2024)
Published in Data mining and knowledge discovery (01.11.2024)
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Journal Article
Fast Approximation of Coherence for Second-Order Noisy Consensus Networks
Zhang, Zuobai, Xu, Wanyue, Yi, Yuhao, Zhang, Zhongzhi
Published in IEEE transactions on cybernetics (01.01.2022)
Published in IEEE transactions on cybernetics (01.01.2022)
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Journal Article
Coherence Scaling of Noisy Second-Order Scale-Free Consensus Networks
Xu, Wanyue, Wu, Bin, Zhang, Zuobai, Zhang, Zhongzhi, Kan, Haibin, Chen, Guanrong
Published in IEEE transactions on cybernetics (01.07.2022)
Published in IEEE transactions on cybernetics (01.07.2022)
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Journal Article
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing
Zhang, Yangtian, Zhang, Zuobai, Zhong, Bozitao, Misra, Sanchit, Tang, Jian
Year of Publication 01.06.2023
Year of Publication 01.06.2023
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Journal Article
Cell-ontology guided transcriptome foundation model
Yuan, Xinyu, Zhan, Zhihao, Zhang, Zuobai, Zhou, Manqi, Zhao, Jianan, Han, Boyu, Li, Yue, Tang, Jian
Year of Publication 22.08.2024
Year of Publication 22.08.2024
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Journal Article
ProtIR: Iterative Refinement between Retrievers and Predictors for Protein Function Annotation
Zhang, Zuobai, Lu, Jiarui, Chenthamarakshan, Vijil, Lozano, Aurélie, Das, Payel, Tang, Jian
Year of Publication 10.02.2024
Year of Publication 10.02.2024
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Journal Article
Structure-Informed Protein Language Model
Zhang, Zuobai, Lu, Jiarui, Chenthamarakshan, Vijil, Lozano, Aurélie, Das, Payel, Tang, Jian
Year of Publication 07.02.2024
Year of Publication 07.02.2024
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Journal Article
Opinion Dynamics Incorporating Higher-Order Interactions
Zhang, Zuobai, Xu, Wanyue, Zhang, Zhongzhi, Chen, Guanrong
Published in 2020 IEEE International Conference on Data Mining (ICDM) (01.11.2020)
Published in 2020 IEEE International Conference on Data Mining (ICDM) (01.11.2020)
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Conference Proceeding
PDB-Struct: A Comprehensive Benchmark for Structure-based Protein Design
Wang, Chuanrui, Zhong, Bozitao, Zhang, Zuobai, Chaudhary, Narendra, Misra, Sanchit, Tang, Jian
Year of Publication 29.11.2023
Year of Publication 29.11.2023
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Journal Article
A Systematic Study of Joint Representation Learning on Protein Sequences and Structures
Zhang, Zuobai, Wang, Chuanrui, Xu, Minghao, Chenthamarakshan, Vijil, Lozano, Aurélie, Das, Payel, Tang, Jian
Year of Publication 10.03.2023
Year of Publication 10.03.2023
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