Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells
Luo, Sai, Lu, J. Yuyang, Liu, Lichao, Yin, Yafei, Chen, Chunyan, Han, Xue, Wu, Bohou, Xu, Ronggang, Liu, Wei, Yan, Pixi, Shao, Wen, Lu, Zhi, Li, Haitao, Na, Jie, Tang, Fuchou, Wang, Jianlong, Zhang, Yong E., Shen, Xiaohua
Published in Cell stem cell (05.05.2016)
Published in Cell stem cell (05.05.2016)
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Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes
Bi, Xupeng, Wang, Kun, Yang, Liandong, Pan, Hailin, Jiang, Haifeng, Wei, Qiwei, Fang, Miaoquan, Yu, Hao, Zhu, Chenglong, Cai, Yiran, He, Yuming, Gan, Xiaoni, Zeng, Honghui, Yu, Daqi, Zhu, Youan, Jiang, Huifeng, Qiu, Qiang, Yang, Huanming, Zhang, Yong E., Wang, Wen, Zhu, Min, He, Shunping, Zhang, Guojie
Published in Cell (04.03.2021)
Published in Cell (04.03.2021)
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Pan-cancer surveys indicate cell cycle-related roles of primate-specific genes in tumors and embryonic cerebrum
Ma, Chenyu, Li, Chunyan, Ma, Huijing, Yu, Daqi, Zhang, Yufei, Zhang, Dan, Su, Tianhan, Wu, Jianmin, Wang, Xiaoyue, Zhang, Li, Chen, Chun-Long, Zhang, Yong E
Published in Genome Biology (06.12.2022)
Published in Genome Biology (06.12.2022)
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Systematic discovery of DNA-binding tandem repeat proteins
Hu, Xiaoxuan, Zhang, Xuechun, Sun, Wen, Liu, Chunhong, Deng, Pujuan, Cao, Yuanwei, Zhang, Chenze, Xu, Ning, Zhang, Tongtong, Zhang, Yong E, Liu, Jun-Jie Gogo, Wang, Haoyi
Published in Nucleic acids research (27.08.2024)
Published in Nucleic acids research (27.08.2024)
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Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs
Xie, Chen, Zhang, Yong E, Chen, Jia-Yu, Liu, Chu-Jun, Zhou, Wei-Zhen, Li, Ying, Zhang, Mao, Zhang, Rongli, Wei, Liping, Li, Chuan-Yun
Published in PLoS genetics (01.09.2012)
Published in PLoS genetics (01.09.2012)
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Accelerated recruitment of new brain development genes into the human genome
Zhang, Yong E, Landback, Patrick, Vibranovski, Maria D, Long, Manyuan
Published in PLoS biology (01.10.2011)
Published in PLoS biology (01.10.2011)
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Adaptation and Phenotypic Diversification in Arabidopsis through Loss-of-Function Mutations in Protein-Coding Genes
Xu, Yong-Chao, Niu, Xiao-Min, Li, Xin-Xin, He, Wenrong, Chen, Jia-Fu, Zou, Yu-Pan, Wu, Qiong, Zhang, Yong E, Busch, Wolfgang, Guo, Ya-Long
Published in The Plant cell (01.05.2019)
Published in The Plant cell (01.05.2019)
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Low-input PacBio sequencing generates high-quality individual fly genomes and characterizes mutational processes
Jia, Hangxing, Tan, Shengjun, Cai, Yingao, Guo, Yanyan, Shen, Jieyu, Zhang, Yaqiong, Ma, Huijing, Zhang, Qingzhu, Chen, Jinfeng, Qiao, Gexia, Ruan, Jue, Zhang, Yong E.
Published in Nature communications (05.07.2024)
Published in Nature communications (05.07.2024)
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Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development
Xia, Shengqian, VanKuren, Nicholas W, Chen, Chunyan, Zhang, Li, Kemkemer, Clause, Shao, Yi, Jia, Hangxing, Lee, UnJin, Advani, Alexander S, Gschwend, Andrea, Vibranovski, Maria D, Chen, Sidi, Zhang, Yong E, Long, Manyuan
Published in PLoS genetics (09.07.2021)
Published in PLoS genetics (09.07.2021)
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Age-dependent chromosomal distribution of male-biased genes in Drosophila
Zhang, Yong E, Vibranovski, Maria D, Krinsky, Benjamin H, Long, Manyuan
Published in Genome research (01.11.2010)
Published in Genome research (01.11.2010)
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Emergence, Retention and Selection: A Trilogy of Origination for Functional De Novo Proteins from Ancestral LncRNAs in Primates
Chen, Jia-Yu, Shen, Qing Sunny, Zhou, Wei-Zhen, Peng, Jiguang, He, Bin Z, Li, Yumei, Liu, Chu-Jun, Luan, Xuke, Ding, Wanqiu, Li, Shuxian, Chen, Chunyan, Tan, Bertrand Chin-Ming, Zhang, Yong E, He, Aibin, Li, Chuan-Yun
Published in PLoS genetics (01.07.2015)
Published in PLoS genetics (01.07.2015)
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DNA transposons mediate duplications via transposition-independent and -dependent mechanisms in metazoans
Tan, Shengjun, Ma, Huijing, Wang, Jinbo, Wang, Man, Wang, Mengxia, Yin, Haodong, Zhang, Yaqiong, Zhang, Xinying, Shen, Jieyu, Wang, Danyang, Banes, Graham L., Zhang, Zhihua, Wu, Jianmin, Huang, Xun, Chen, Hua, Ge, Siqin, Chen, Chun-Long, Zhang, Yong E.
Published in Nature communications (13.07.2021)
Published in Nature communications (13.07.2021)
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Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome
Ni, Xiaochun, Zhang, Yong E, Nègre, Nicolas, Chen, Sidi, Long, Manyuan, White, Kevin P
Published in PLoS biology (01.11.2012)
Published in PLoS biology (01.11.2012)
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RNA editome in rhesus macaque shaped by purifying selection
Chen, Jia-Yu, Peng, Zhiyu, Zhang, Rongli, Yang, Xin-Zhuang, Tan, Bertrand Chin-Ming, Fang, Huaying, Liu, Chu-Jun, Shi, Mingming, Ye, Zhi-Qiang, Zhang, Yong E, Deng, Minghua, Zhang, Xiuqin, Li, Chuan-Yun
Published in PLoS genetics (01.04.2014)
Published in PLoS genetics (01.04.2014)
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Direct measurement of pervasive weak repression by microRNAs and their role at the network level
Ma, Fuqiang, Lin, Pei, Chen, Qingjian, Lu, Xuemei, Zhang, Yong E, Wu, Chung-I
Published in BMC genomics (15.05.2018)
Published in BMC genomics (15.05.2018)
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Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates
An, Ni A, Ding, Wanqiu, Yang, Xin-Zhuang, Peng, Jiguang, He, Bin Z, Shen, Qing Sunny, Lu, Fujian, He, Aibin, Zhang, Yong E, Tan, Bertrand Chin-Ming, Chen, Jia-Yu, Li, Chuan-Yun
Published in Genome Biology (04.02.2019)
Published in Genome Biology (04.02.2019)
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Evolutionary transition between invertebrates and vertebrates via methylation reprogramming in embryogenesis
Xu, Xiaocui, Li, Guoqiang, Li, Congru, Zhang, Jing, Wang, Qiang, Simmons, David K, Chen, Xuepeng, Wijesena, Naveen, Zhu, Wei, Wang, Zhanyang, Wang, Zhenhua, Ju, Bao, Ci, Weimin, Lu, Xuemei, Yu, Daqi, Wang, Qian-fei, Aluru, Neelakanteswar, Oliveri, Paola, Zhang, Yong E, Martindale, Mark Q, Liu, Jiang
Published in National science review (01.10.2019)
Published in National science review (01.10.2019)
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Evolution of beak morphology in the Ground Tit revealed by comparative transcriptomics
Cheng, Yalin, Gao, Bin, Wang, Haitao, Han, Naijian, Shao, Shimiao, Wu, Shaoyuan, Song, Gang, Zhang, Yong E, Zhu, Xiaojia, Lu, Xin, Qu, Yanhua, Lei, Fumin
Published in Frontiers in zoology (21.12.2017)
Published in Frontiers in zoology (21.12.2017)
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