Spatiotemporally dynamic, cell-type–dependent premeiotic and meiotic phasiRNAs in maize anthers
Zhai, Jixian, Zhang, Han, Arikit, Siwaret, Huang, Kun, Nan, Guo-Ling, Walbot, Virginia, Meyers, Blake C.
Published in Proceedings of the National Academy of Sciences - PNAS (10.03.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (10.03.2015)
Get full text
Journal Article
FLEP-seq: simultaneous detection of RNA polymerase II position, splicing status, polyadenylation site and poly(A) tail length at genome-wide scale by single-molecule nascent RNA sequencing
Long, Yanping, Jia, Jinbu, Mo, Weipeng, Jin, Xianhao, Zhai, Jixian
Published in Nature protocols (01.09.2021)
Published in Nature protocols (01.09.2021)
Get full text
Journal Article
A Comprehensive Online Database for Exploring ∼20,000 Public Arabidopsis RNA-Seq Libraries
Zhang, Hong, Zhang, Fei, Yu, Yiming, Feng, Li, Jia, Jinbu, Liu, Bo, Li, Bosheng, Guo, Hongwei, Zhai, Jixian
Published in Molecular plant (07.09.2020)
Published in Molecular plant (07.09.2020)
Get full text
Journal Article
Plant 22-nt siRNAs mediate translational repression and stress adaptation
Wu, Huihui, Li, Bosheng, Iwakawa, Hiro-oki, Pan, Yajie, Tang, Xianli, Ling-hu, Qianyan, Liu, Yuelin, Sheng, Shixin, Feng, Li, Zhang, Hong, Zhang, Xinyan, Tang, Zhonghua, Xia, Xinli, Zhai, Jixian, Guo, Hongwei
Published in Nature (London) (01.05.2020)
Published in Nature (London) (01.05.2020)
Get full text
Journal Article
MS23, a master basic helix-loop-helix factor, regulates the specification and development of the tapetum in maize
Nan, Guo-Ling, Zhai, Jixian, Arikit, Siwaret, Morrow, Darren, Fernandes, John, Mai, Lan, Nguyen, Nhi, Meyers, Blake C, Walbot, Virginia
Published in Development (Cambridge) (01.01.2017)
Published in Development (Cambridge) (01.01.2017)
Get full text
Journal Article
A Phytophthora Effector Suppresses Trans-Kingdom RNAi to Promote Disease Susceptibility
Hou, Yingnan, Zhai, Yi, Feng, Li, Karimi, Hana Z., Rutter, Brian D., Zeng, Liping, Choi, Du Seok, Zhang, Bailong, Gu, Weifeng, Chen, Xuemei, Ye, Wenwu, Innes, Roger W., Zhai, Jixian, Ma, Wenbo
Published in Cell host & microbe (09.01.2019)
Published in Cell host & microbe (09.01.2019)
Get full text
Journal Article
Interplay of phytohormones and epigenetic regulation: A recipe for plant development and plasticity
Jiang, Kai, Guo, Hongwei, Zhai, Jixian
Published in Journal of integrative plant biology (01.02.2023)
Published in Journal of integrative plant biology (01.02.2023)
Get full text
Journal Article
Post-transcriptional splicing of nascent RNA contributes to widespread intron retention in plants
Jia, Jinbu, Long, Yanping, Zhang, Hong, Li, Zhuowen, Liu, Zhijian, Zhao, Yan, Lu, Dongdong, Jin, Xianhao, Deng, Xian, Xia, Rui, Cao, Xiaofeng, Zhai, Jixian
Published in Nature plants (01.07.2020)
Published in Nature plants (01.07.2020)
Get full text
Journal Article
FlsnRNA-seq: protoplasting-free full-length single-nucleus RNA profiling in plants
Long, Yanping, Liu, Zhijian, Jia, Jinbu, Mo, Weipeng, Fang, Liang, Lu, Dongdong, Liu, Bo, Zhang, Hong, Chen, Wei, Zhai, Jixian
Published in Genome Biology (19.02.2021)
Published in Genome Biology (19.02.2021)
Get full text
Journal Article
Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation
Wang, Qian, Xue, Yan, Zhang, Laixing, Zhong, Zhenhui, Feng, Suhua, Wang, Changshi, Xiao, Lifan, Yang, Zhenlin, Harris, C Jake, Wu, Zhe, Zhai, Jixian, Yang, Maojun, Li, Sisi, Jacobsen, Steven E, Du, Jiamu
Published in Science (American Association for the Advancement of Science) (26.11.2021)
Published in Science (American Association for the Advancement of Science) (26.11.2021)
Get full text
Journal Article
sRNAanno—a database repository of uniformly annotated small RNAs in plants
Chen, Chengjie, Li, Jiawei, Feng, Junting, Liu, Bo, Feng, Lei, Yu, Xiaoling, Li, Guanliang, Zhai, Jixian, Meyers, Blake C., Xia, Rui
Published in Horticulture research (01.03.2021)
Published in Horticulture research (01.03.2021)
Get full text
Journal Article
CG gene body DNA methylation changes and evolution of duplicated genes in cassava
Wang, Haifeng, Beyene, Getu, Zhai, Jixian, Feng, Suhua, Fahlgren, Noah, Taylor, Nigel J., Bart, Rebecca, Carrington, James C., Jacobsen, Steven E., Ausin, Israel
Published in Proceedings of the National Academy of Sciences - PNAS (03.11.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (03.11.2015)
Get full text
Journal Article
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
Wei, Liya, Gu, Lianfeng, Song, Xianwei, Cui, Xiekui, Lu, Zhike, Zhou, Ming, Wang, Lulu, Hu, Fengyi, Zhai, Jixian, Meyers, Blake C., Cao, Xiaofeng
Published in Proceedings of the National Academy of Sciences - PNAS (11.03.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (11.03.2014)
Get full text
Journal Article
Widespread long-range cis-regulatory elements in the maize genome
Ricci, William A., Lu, Zefu, Ji, Lexiang, Marand, Alexandre P., Ethridge, Christina L., Murphy, Nathalie G., Noshay, Jaclyn M., Galli, Mary, Mejía-Guerra, María Katherine, Colomé-Tatché, Maria, Johannes, Frank, Rowley, M. Jordan, Corces, Victor G., Zhai, Jixian, Scanlon, Michael J., Buckler, Edward S., Gallavotti, Andrea, Springer, Nathan M., Schmitz, Robert J., Zhang, Xiaoyu
Published in Nature plants (01.12.2019)
Published in Nature plants (01.12.2019)
Get full text
Journal Article
Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage
Jeong, Dong-Hoon, Park, Sunhee, Zhai, Jixian, Gurazada, Sai Guna Ranjan, De Paoli, Emanuele, Meyers, Blake C., Green, Pamela J.
Published in The Plant cell (01.12.2011)
Published in The Plant cell (01.12.2011)
Get full text
Journal Article
Composite Hedges Nanopores codec system for rapid and portable DNA data readout with high INDEL-Correction
Zhao, Xuyang, Li, Junyao, Fan, Qingyuan, Dai, Jing, Long, Yanping, Liu, Ronghui, Zhai, Jixian, Pan, Qing, Li, Yi
Published in Nature communications (30.10.2024)
Published in Nature communications (30.10.2024)
Get full text
Journal Article
Soybean DICER-LIKE2 Regulates Seed Coat Color via Production of Primary 22-Nucleotide Small Interfering RNAs from Long Inverted Repeats
Jia, Jinbu, Ji, Ronghuan, Li, Zhuowen, Yu, Yiming, Nakano, Mayumi, Long, Yanping, Feng, Li, Qin, Chao, Lu, Dongdong, Zhan, Junpeng, Xia, Rui, Meyers, Blake C, Liu, Bin, Zhai, Jixian
Published in The Plant cell (01.12.2020)
Published in The Plant cell (01.12.2020)
Get full text
Journal Article