Predicting helical topologies in RNA junctions as tree graphs
Laing, Christian, Jung, Segun, Kim, Namhee, Elmetwaly, Shereef, Zahran, Mai, Schlick, Tamar
Published in PloS one (26.08.2013)
Published in PloS one (26.08.2013)
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Journal Article
Novel multi-target compounds in the quest for new chemotherapies against Alzheimer’s disease: An experimental and theoretical study
Martínez, Alberto, Zahran, Mai, Gomez, Miguel, Cooper, Coreen, Guevara, Johnny, Ekengard, Erik, Nordlander, Ebbe, Alcendor, Ralph, Hambleton, Sarah
Published in Bioorganic & medicinal chemistry (15.09.2018)
Published in Bioorganic & medicinal chemistry (15.09.2018)
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Journal Article
Ionophoric polyphenols are permeable to the blood–brain barrier, interact with human serum albumin and Calf Thymus DNA, and inhibit AChE enzymatic activity
Martínez, Alberto, Zahran, Mai, Gomez, Miguel, Guevara, Johnny, Pichardo-Bueno, Rosemary, Asim, Junaid, Ortiz, Gabriel, Andoh, Yaa, Shibutani, Sinji, Kaur, Baljit
Published in Medicinal chemistry research (01.11.2020)
Published in Medicinal chemistry research (01.11.2020)
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Journal Article
The relation between lignin sequence and its 3D structure
Rawal, Takat B., Zahran, Mai, Dhital, Brittiny, Akbilgic, Oguz, Petridis, Loukas
Published in Biochimica et biophysica acta. General subjects (01.05.2020)
Published in Biochimica et biophysica acta. General subjects (01.05.2020)
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Journal Article
Effect of a U:G mispair on the water around DNA
Mardt, Andreas, Gorriz, Rene F., Ferraro, Federica, Ulrich, Philip, Zahran, Mai, Imhof, Petra
Published in Biophysical chemistry (01.04.2022)
Published in Biophysical chemistry (01.04.2022)
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Journal Article
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19
Acharya, A, Agarwal, R, Baker, M. B, Baudry, J, Bhowmik, D, Boehm, S, Byler, K. G, Chen, S. Y, Coates, L, Cooper, C. J, Demerdash, O, Daidone, I, Eblen, J. D, Ellingson, S, Forli, S, Glaser, J, Gumbart, J. C, Gunnels, J, Hernandez, O, Irle, S, Kneller, D. W, Kovalevsky, A, Larkin, J, Lawrence, T. J, LeGrand, S, Liu, S.-H, Mitchell, J.C, Park, G, Parks, J.M, Pavlova, A, Petridis, L, Poole, D, Pouchard, L, Ramanathan, A, Rogers, D. M, Santos-Martins, D, Scheinberg, A, Sedova, A, Shen, Y, Smith, J. C, Smith, M. D, Soto, C, Tsaris, A, Thavappiragasam, M, Tillack, A. F, Vermaas, J. V, Vuong, V. Q, Yin, J, Yoo, S, Zahran, M, Zanetti-Polzi, L
Published in Journal of chemical information and modeling (28.12.2020)
Published in Journal of chemical information and modeling (28.12.2020)
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Journal Article
RAG-3D: a search tool for RNA 3D substructures
Zahran, Mai, Sevim Bayrak, Cigdem, Elmetwaly, Shereef, Schlick, Tamar
Published in Nucleic acids research (30.10.2015)
Published in Nucleic acids research (30.10.2015)
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Journal Article
The relation between lignin sequence and its 3D structure
Rawal, Takat B., Zahran, Mai, Dhital, Brittiny, Akbilgic, Oguz, Petridis, Loukas
Published in Biochimica et biophysica acta. General subjects (04.02.2020)
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Published in Biochimica et biophysica acta. General subjects (04.02.2020)
Journal Article
Arabinose substitution effect on xylan rigidity and self-aggregation
Shrestha, Utsab R., Smith, Sydney, Pingali, Sai Venkatesh, Yang, Hui, Zahran, Mai, Breunig, Lloyd, Wilson, Liza A., Kowali, Margaret, Kubicki, James D., Cosgrove, Daniel J., O’Neill, Hugh M., Petridis, Loukas
Published in Cellulose (London) (15.03.2019)
Published in Cellulose (London) (15.03.2019)
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Journal Article
Mechanism of DNA Recognition by the Restriction Enzyme EcoRV
Zahran, Mai, Daidone, Isabella, Smith, Jeremy C., Imhof, Petra
Published in Journal of molecular biology (20.08.2010)
Published in Journal of molecular biology (20.08.2010)
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Journal Article
Increasing cleavage specificity and activity of restriction endonuclease KpnI
Vasu, Kommireddy, Nagamalleswari, Easa, Zahran, Mai, Imhof, Petra, Xu, Shuang-Yong, Zhu, Zhenyu, Chan, Siu-Hong, Nagaraja, Valakunja
Published in Nucleic acids research (01.11.2013)
Published in Nucleic acids research (01.11.2013)
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Journal Article
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19
Acharya, Atanu, Agarwal, Rupesh, Baker, M. B., Baudry, Jerome Y., Bhowmik, Debsindhu, Boehm, Swen, Byler, Kendall G., Chen, S. Y., Coates, Leighton, Cooper, Connor J., Demerdash, Omar, Daidone, Isabella, Eblen, John D., Ellingson, Sally R., Forli, Stefano, Glaser, Jens, Gumbart, James C., Gunnels, John, Hernandez, Oscar, Irle, Stephan, Kneller, Daniel W., Kovalevsky, Andrii Y., Larkin, Jeffrey, Lawrence, Travis J., LeGrand, Scott, Liu, S.-H. Kevin, Mitchell, Julie C., Park, Gilchan, Parks, Jerry M., Pavlova, Anna, Petridis, Loukas, Poole, Duncan, Pouchard, Line, Ramanathan, Arvind, Rogers, David M., Santos-Martins, Diogo, Scheinberg, Aaron, Sedova, Ada, Shen, Yue, Smith, Jeremy C., Smith, Micholas D., Soto, Carlos, Tsaris, Aristeidis, Thavappiragasam, Mathialakan, Tillack, Andreas F., Vermaas, Josh V., Vuong, Van Quan, Yin, Junqi, Yoo, Shinjae, Zahran, Mai, Zanetti-Polzi, Laura
Published in Journal of chemical information and modeling (16.12.2020)
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Published in Journal of chemical information and modeling (16.12.2020)
Journal Article
Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19
Acharya, Atanu, Agarwal, Rupesh, Baker, M. B., Baudry, Jerome Y., Bhowmik, Debsindhu, Boehm, Swen, Byler, Kendall G., Chen, S. Y., Coates, Leighton, Cooper, Connor J., Demerdash, Omar N., Daidone, Isabella, Eblen, John D., Ellingson, Sally R., Forli, Stefano, Glaser, Jens, Gumbart, James C., Gunnels, John, Hernandez, Oscar, Irle, Stephan, Kneller, Daniel W., Kovalevsky, Andrii Y., Larkin, Jeffrey, Lawrence, Travis J., LeGrand, Scott, Liu, S.-H. Kevin, Mitchell, Julie C., Park, Gilchan, Parks, Jerry M., Pavlova, Anna, Petridis, Loukas, Poole, Duncan, Pouchard, Line, Ramanathan, Arvind, Rogers, David M., Santos-Martins, Diogo, Scheinberg, Aaron, Sedova, Ada, Shen, Yue, Smith, Jeremy C., Smith, Micholas D., Soto, Carlos, Tsaris, Aristeidis, Thavappiragasam, Mathialakan, Tillack, Andreas F., Vermaas, Josh V., Vuong, Van Quan, Yin, Junqi, Yoo, Shinjae, Zahran, Mai, Zanetti-Polzi, Laura
Published in Journal of chemical information and modeling (16.12.2020)
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Published in Journal of chemical information and modeling (16.12.2020)
Journal Article
Role of magnesium ions in DNA recognition by the EcoRV restriction endonuclease
Zahran, Mai, Berezniak, Tomasz, Imhof, Petra, Smith, Jeremy C.
Published in FEBS letters (02.09.2011)
Published in FEBS letters (02.09.2011)
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Journal Article
Mechanism of DNA Recognition by EcoRV
Zahran, Mai, Daidone, Isabella, Imhof, Petra, Smith, Jeremy C.
Published in Biophysical journal (01.01.2010)
Published in Biophysical journal (01.01.2010)
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Journal Article
Predicting Helical Topologies in RNA Junctions as Tree Graphs: e71947
Laing, Christian, Jung, Segun, Kim, Namhee, Elmetwaly, Shereef, Zahran, Mai, Schlick, Tamar
Published in PloS one (01.08.2013)
Published in PloS one (01.08.2013)
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Journal Article
Structural and electrostatic properties of ubiquitination and related pathways
Winn, Peter J, Zahran, Mai, Battey, James N D, Zhou, Yanxiang, Wade, Rebecca C, Banerjee, Amit
Published in Frontiers in bioscience (01.05.2007)
Published in Frontiers in bioscience (01.05.2007)
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Journal Article