SiFit: inferring tumor trees from single-cell sequencing data under finite-sites models
Zafar, Hamim, Tzen, Anthony, Navin, Nicholas, Chen, Ken, Nakhleh, Luay
Published in Genome Biology (19.09.2017)
Published in Genome Biology (19.09.2017)
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Journal Article
Thrombospondin 2 is a key determinant of fibrogenesis in non‐alcoholic fatty liver disease
Kimura, Takefumi, Iwadare, Takanobu, Wakabayashi, Shun‐ichi, Kuldeep, Seema, Nakajima, Tomoyuki, Yamazaki, Tomoo, Aomura, Daiki, Zafar, Hamim, Iwaya, Mai, Joshita, Satoru, Uehara, Takeshi, Pydi, Sai P., Tanaka, Naoki, Umemura, Takeji
Published in Liver international (01.02.2024)
Published in Liver international (01.02.2024)
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Journal Article
Matrilysin/MMP-7 Cleavage of Perlecan/HSPG2 Complexed with Semaphorin 3A Supports FAK-Mediated Stromal Invasion by Prostate Cancer Cells
Grindel, Brian J, Martinez, Jerahme R, Tellman, Tristen V, Harrington, Daniel A, Zafar, Hamim, Nakhleh, Luay, Chung, Leland W, Farach-Carson, Mary C
Published in Scientific reports (08.05.2018)
Published in Scientific reports (08.05.2018)
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Journal Article
A MODIFIED DIFFERENTIAL EVOLUTION ALGORITHM FOR SHAPED BEAM LINEAR ARRAY ANTENNA DESIGN
Mandal, A, Zafar, H, Das, S, Vasilakos, A
Published in Electromagnetic waves (Cambridge, Mass.) (01.01.2012)
Published in Electromagnetic waves (Cambridge, Mass.) (01.01.2012)
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Journal Article
Monovar: single-nucleotide variant detection in single cells
Zafar, Hamim, Wang, Yong, Nakhleh, Luay, Navin, Nicholas, Chen, Ken
Published in Nature methods (01.06.2016)
Published in Nature methods (01.06.2016)
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Journal Article
TruthBot: An Automated Conversational Tool for Intent Learning, Curated Information Presenting, and Fake News Alerting
Gupta, Ankur, Varun, Yash, Das, Prarthana, Muttineni, Nithya, Srivastava, Parth, Hamim Zafar, Chakraborty, Tanmoy, Nath, Swaprava
Published in arXiv.org (31.01.2021)
Published in arXiv.org (31.01.2021)
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Journal Article
2055-LB: Temporal Resolution of Single-Cell Transcriptomics and Epigenomics of Murine Pancreatic Islet in Diet-Induced Obesity
Singh, Simran, Musale, Krushna Pavan, Barella, Luiz F, Shree, Ajita, Zafar, Hamim, Wess, Jürgen, Pydi, Sai Prasad
Published in Diabetes (New York, N.Y.) (01.06.2024)
Published in Diabetes (New York, N.Y.) (01.06.2024)
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Journal Article
Stiffness-dependent MSC homing and differentiation into CAFs - implications for breast cancer invasion
Saxena, Neha, Chakraborty, Soura, Dutta, Sarbajeet, Bhardwaj, Garvit, Karnik, Nupur, Shetty, Omshree, Jadhav, Sameer, Zafar, Hamim, Sen, Shamik
Published in Journal of cell science (01.01.2024)
Published in Journal of cell science (01.01.2024)
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Journal Article
Molecular mechanism of synovial joint site specification and induction in developing vertebrate limbs
Yadav, Upendra S, Biswas, Tathagata, Singh, Pratik N, Gupta, Pankaj, Chakraborty, Soura, Delgado, Irene, Zafar, Hamim, Capellini, Terence D, Torres, Miguel, Bandyopadhyay, Amitabha
Published in Development (Cambridge) (01.07.2023)
Published in Development (Cambridge) (01.07.2023)
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Journal Article
Phylovar: toward scalable phylogeny-aware inference of single-nucleotide variations from single-cell DNA sequencing data
Edrisi, Mohammadamin, Valecha, Monica V, Chowdary, Sunkara B V, Robledo, Sergio, Ogilvie, Huw A, Posada, David, Zafar, Hamim, Nakhleh, Luay
Published in Bioinformatics (24.06.2022)
Published in Bioinformatics (24.06.2022)
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Journal Article
Computational approaches for inferring tumor evolution from single-cell genomic data
Zafar, Hamim, Navin, Nicholas, Nakhleh, Luay, Chen, Ken
Published in Current opinion in systems biology (01.02.2018)
Published in Current opinion in systems biology (01.02.2018)
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Journal Article
Adaptive-Differential-Evolution-Based Design of Two-Channel Quadrature Mirror Filter Banks for Sub-Band Coding and Data Transmission
Ghosh, P., Das, S., Zafar, H.
Published in IEEE transactions on systems, man and cybernetics. Part C, Applications and reviews (01.11.2012)
Published in IEEE transactions on systems, man and cybernetics. Part C, Applications and reviews (01.11.2012)
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Journal Article
Abstract 1563: Interplay between perlecan/HSPG2 and matrilysin/MMP-7 in the prostate cancer tumor microenvironment directs metastatic programming through focal adhesion kinase and FoxM1
Grindel, Brian J., Martinez, Jerahme, Zafar, Hamim, Nakhleh, Luay K., Chung, Leland W.K., Farach-Carson, Mary C.
Published in Cancer research (Chicago, Ill.) (15.07.2016)
Published in Cancer research (Chicago, Ill.) (15.07.2016)
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Journal Article
Dynamic economic dispatch using Lbest-PSO with dynamically varying sub-swarms
Chowdhury, Arkabandhu, Zafar, Hamim, Panigrahi, B. K., Krishnanand, K. R., Mohapatra, Ankita, Cui, Zhihua
Published in Memetic computing (01.06.2014)
Published in Memetic computing (01.06.2014)
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Journal Article