dmGWAS: dense module searching for genome-wide association studies in protein-protein interaction networks
Jia, Peilin, Zheng, Siyuan, Long, Jirong, Zheng, Wei, Zhao, Zhongming
Published in Bioinformatics (01.01.2011)
Published in Bioinformatics (01.01.2011)
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Integrated analysis of telomerase enzymatic activity unravels an association with cancer stemness and proliferation
Noureen, Nighat, Wu, Shaofang, Lv, Yingli, Yang, Juechen, Alfred Yung, W K, Gelfond, Jonathan, Wang, Xiaojing, Koul, Dimpy, Ludlow, Andrew, Zheng, Siyuan
Published in Nature communications (08.01.2021)
Published in Nature communications (08.01.2021)
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Microfluidic electrosynthesis of thiuram disulfides
Zheng, Siyuan, Wang, Kai, Luo, Guangsheng
Published in Green chemistry : an international journal and green chemistry resource : GC (01.01.2021)
Published in Green chemistry : an international journal and green chemistry resource : GC (01.01.2021)
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Signature-scoring methods developed for bulk samples are not adequate for cancer single-cell RNA sequencing data
Noureen, Nighat, Ye, Zhenqing, Chen, Yidong, Wang, Xiaojing, Zheng, Siyuan
Published in eLife (25.02.2022)
Published in eLife (25.02.2022)
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TumorFusions: an integrative resource for cancer-associated transcript fusions
Hu, Xin, Wang, Qianghu, Tang, Ming, Barthel, Floris, Amin, Samirkumar, Yoshihara, Kosuke, Lang, Frederick M, Martinez-Ledesma, Emmanuel, Lee, Soo Hyun, Zheng, Siyuan, Verhaak, Roel G W
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Systematic analysis of telomere length and somatic alterations in 31 cancer types
Barthel, Floris P, Wei, Wei, Tang, Ming, Martinez-Ledesma, Emmanuel, Hu, Xin, Amin, Samirkumar B, Akdemir, Kadir C, Seth, Sahil, Song, Xingzhi, Wang, Qianghu, Lichtenberg, Tara, Hu, Jian, Zhang, Jianhua, Zheng, Siyuan, Verhaak, Roel G W
Published in Nature genetics (01.03.2017)
Published in Nature genetics (01.03.2017)
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Discordant inheritance of chromosomal and extrachromosomal DNA elements contributes to dynamic disease evolution in glioblastoma
deCarvalho, Ana C, Kim, Hoon, Poisson, Laila M, Winn, Mary E, Mueller, Claudius, Cherba, David, Koeman, Julie, Seth, Sahil, Protopopov, Alexei, Felicella, Michelle, Zheng, Siyuan, Multani, Asha, Jiang, Yongying, Zhang, Jianhua, Nam, Do-Hyun, Petricoin, Emanuel F, Chin, Lynda, Mikkelsen, Tom, Verhaak, Roel G W
Published in Nature genetics (01.05.2018)
Published in Nature genetics (01.05.2018)
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Genomic disparities between cancers in adolescent and young adults and in older adults
Wang, Xiaojing, Langevin, Anne-Marie, Houghton, Peter J, Zheng, Siyuan
Published in Nature communications (24.11.2022)
Published in Nature communications (24.11.2022)
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AI-based segmentation of renal enhanced CT images for quantitative evaluate of chronic kidney disease
Luo, Hui, Li, Jingzhen, Huang, Haiyang, Jiao, Lianghong, Zheng, Siyuan, Ying, Yibo, Li, Qiang
Published in Scientific reports (23.07.2024)
Published in Scientific reports (23.07.2024)
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Whole-genome and multisector exome sequencing of primary and post-treatment glioblastoma reveals patterns of tumor evolution
Kim, Hoon, Zheng, Siyuan, Amini, Seyed S, Virk, Selene M, Mikkelsen, Tom, Brat, Daniel J, Grimsby, Jonna, Sougnez, Carrie, Muller, Florian, Hu, Jian, Sloan, Andrew E, Cohen, Mark L, Van Meir, Erwin G, Scarpace, Lisa, Laird, Peter W, Weinstein, John N, Lander, Eric S, Gabriel, Stacey, Getz, Gad, Meyerson, Matthew, Chin, Lynda, Barnholtz-Sloan, Jill S, Verhaak, Roel G W
Published in Genome research (01.03.2015)
Published in Genome research (01.03.2015)
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Influence of Three Modification Methods on the Structure, Physicochemical, and Functional Properties of Insoluble Dietary Fiber from Rosa roxburghii Tratt Pomace
Huang, Yumeng, Li, Chao, Zheng, Siyuan, Fu, Xiong, Huang, Qiang, Liu, Guang, Chen, Qing
Published in Molecules (Basel, Switzerland) (02.05.2024)
Published in Molecules (Basel, Switzerland) (02.05.2024)
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PRADA: pipeline for RNA sequencing data analysis
Torres-García, Wandaliz, Zheng, Siyuan, Sivachenko, Andrey, Vegesna, Rahulsimham, Wang, Qianghu, Yao, Rong, Berger, Michael F, Weinstein, John N, Getz, Gad, Verhaak, Roel G W
Published in Bioinformatics (Oxford, England) (01.08.2014)
Published in Bioinformatics (Oxford, England) (01.08.2014)
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Murine models of IDH-wild-type glioblastoma exhibit spatial segregation of tumor initiation and manifestation during evolution
Li, Yinghua, Li, Bo, Li, Wei, Wang, Yuan, Akgül, Seçkin, Treisman, Daniel M, Heist, Kevin A, Pierce, Brianna R, Hoff, Benjamin, Ho, Cheng-Ying, Ferguson, David O, Rehemtulla, Alnawaz, Zheng, Siyuan, Ross, Brian D, Li, Jun Z, Zhu, Yuan
Published in Nature communications (22.07.2020)
Published in Nature communications (22.07.2020)
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Journal Article
Role of Insulin-Like Growth Factor-1 Signaling Pathway in Cisplatin-Resistant Lung Cancer Cells
Sun, Yunguang, Ph.D, Zheng, Siyuan, Ph.D, Torossian, Artour, B.S, Speirs, Christina K., B.S, Schleicher, Stephen, B.S, Giacalone, Nicholas J., B.S, Carbone, David P., M.D., Ph.D, Zhao, Zhongming, Ph.D, Lu, Bo, M.D., Ph.D
Published in International journal of radiation oncology, biology, physics (01.03.2012)
Published in International journal of radiation oncology, biology, physics (01.03.2012)
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