Applications of machine learning in drug discovery and development
Vamathevan, Jessica, Clark, Dominic, Czodrowski, Paul, Dunham, Ian, Ferran, Edgardo, Lee, George, Li, Bin, Madabhushi, Anant, Shah, Parantu, Spitzer, Michaela, Zhao, Shanrong
Published in Nature reviews. Drug discovery (01.06.2019)
Published in Nature reviews. Drug discovery (01.06.2019)
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Journal Article
Comparison of RNA-Seq and microarray in transcriptome profiling of activated T cells
Zhao, Shanrong, Fung-Leung, Wai-Ping, Bittner, Anton, Ngo, Karen, Liu, Xuejun
Published in PloS one (16.01.2014)
Published in PloS one (16.01.2014)
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Journal Article
Single-cell analyses of Crohn's disease tissues reveal intestinal intraepithelial T cells heterogeneity and altered subset distributions
Jaeger, Natalia, Gamini, Ramya, Cella, Marina, Schettini, Jorge L, Bugatti, Mattia, Zhao, Shanrong, Rosadini, Charles V, Esaulova, Ekaterina, Di Luccia, Blanda, Kinnett, Baylee, Vermi, William, Artyomov, Maxim N, Wynn, Thomas A, Xavier, Ramnik J, Jelinsky, Scott A, Colonna, Marco
Published in Nature communications (26.03.2021)
Published in Nature communications (26.03.2021)
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Journal Article
RORγt and RORα signature genes in human Th17 cells
Castro, Glenda, Liu, Xuejun, Ngo, Karen, De Leon-Tabaldo, Aimee, Zhao, Shanrong, Luna-Roman, Rosa, Yu, Jingxue, Cao, Tinghua, Kuhn, Robert, Wilkinson, Patrick, Herman, Krystal, Nelen, Marina I, Blevitt, Jonathan, Xue, Xiaohua, Fourie, Anne, Fung-Leung, Wai-Ping
Published in PloS one (01.08.2017)
Published in PloS one (01.08.2017)
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Journal Article
Standard machine learning approaches outperform deep representation learning on phenotype prediction from transcriptomics data
Smith, Aaron M, Walsh, Jonathan R, Long, John, Davis, Craig B, Henstock, Peter, Hodge, Martin R, Maciejewski, Mateusz, Mu, Xinmeng Jasmine, Ra, Stephen, Zhao, Shanrong, Ziemek, Daniel, Fisher, Charles K
Published in BMC bioinformatics (20.03.2020)
Published in BMC bioinformatics (20.03.2020)
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Journal Article
Nanoscale constraints on the nucleation and evolution of granular zircon from reidite in impactites at the Chicxulub impact structure
Zhao, Jiawei, Zhang, Xiang, Xiao, Long, Cavosie, Aaron J., Timms, Nicholas E., Nemchin, Alexander, Xiao, Zhiyong, Hu, Wentao, Chang, Yuqing, Shu, Jinfu, He, Qi, Zhao, Shanrong, Wang, Jiang, Zhao, Jiannan
Published in Earth and planetary science letters (15.01.2024)
Published in Earth and planetary science letters (15.01.2024)
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Journal Article
Comparison of stranded and non-stranded RNA-seq transcriptome profiling and investigation of gene overlap
Zhao, Shanrong, Zhang, Ying, Gordon, William, Quan, Jie, Xi, Hualin, Du, Sarah, von Schack, David, Zhang, Baohong
Published in BMC genomics (03.09.2015)
Published in BMC genomics (03.09.2015)
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Journal Article
A protein kinase C α and β inhibitor blunts hyperphagia to halt renal function decline and reduces adiposity in a rat model of obesity-driven type 2 diabetes
Wang, Ju, Casimiro-Garcia, Agustin, Johnson, Bryce G, Duffen, Jennifer, Cain, Michael, Savary, Leigh, Wang, Stephen, Nambiar, Prashant, Lech, Matthew, Zhao, Shanrong, Xi, Li, Zhan, Yutian, Olson, Jennifer, Stejskal, James A, Lin, Hank, Zhang, Baohong, Martinez, Robert V, Masek-Hammerman, Katherine, Schlerman, Franklin J, Dower, Ken
Published in Scientific reports (07.10.2023)
Published in Scientific reports (07.10.2023)
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Journal Article
Crystallographic evidence for simultaneous growth in graphic granite
Xu, Haijun, Zhang, Junfeng, Yu, Tony, Rivers, Mark, Wang, Yanbin, Zhao, Shanrong
Published in Gondwana research (01.06.2015)
Published in Gondwana research (01.06.2015)
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Journal Article
Subsets of ILC3-ILC1-like cells generate a diversity spectrum of innate lymphoid cells in human mucosal tissues
Cella, Marina, Gamini, Ramya, Sécca, Cristiane, Collins, Patrick L, Zhao, Shanrong, Peng, Vincent, Robinette, Michelle L, Schettini, Jorge, Zaitsev, Konstantin, Gordon, William, Bando, Jennifer K, Yomogida, Kentaro, Cortez, Victor, Fronick, Catrina, Fulton, Robert, Lin, Lih-Ling, Gilfillan, Susan, Flavell, Richard A, Shan, Liang, Artyomov, Maxim N, Bowman, Michael, Oltz, Eugene M, Jelinsky, Scott A, Colonna, Marco
Published in Nature immunology (01.08.2019)
Published in Nature immunology (01.08.2019)
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Journal Article
Publisher Correction: Subsets of ILC3-ILC1-like cells generate a diversity spectrum of innate lymphoid cells in human mucosal tissues
Cella, Marina, Gamini, Ramya, Sécca, Cristiane, Collins, Patrick L, Zhao, Shanrong, Peng, Vincent, Robinette, Michelle L, Schettini, Jorge, Zaitsev, Konstantin, Gordon, William, Bando, Jennifer K, Yomogida, Kentaro, Cortez, Victor, Fronick, Catrina, Fulton, Robert, Lin, Lih-Ling, Gilfillan, Susan, Flavell, Richard A, Shan, Liang, Artyomov, Maxim N, Bowman, Michael, Oltz, Eugene M, Jelinsky, Scott A, Colonna, Marco
Published in Nature immunology (01.10.2019)
Published in Nature immunology (01.10.2019)
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Journal Article
High resolution molecular and histological analysis of renal disease progression in ZSF1 fa/faCP rats, a model of type 2 diabetic nephropathy
Dower, Ken, Zhao, Shanrong, Schlerman, Franklin J, Savary, Leigh, Campanholle, Gabriela, Johnson, Bryce G, Xi, Li, Nguyen, Vuong, Zhan, Yutian, Lech, Matthew P, Wang, Ju, Nie, Qing, Karsdal, Morten A, Genovese, Federica, Boucher, Germaine, Brown, Thomas P, Zhang, Baohong, Homer, Bruce L, Martinez, Robert V
Published in PloS one (2017)
Published in PloS one (2017)
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