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Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma

by Linehan, W. Marston, Spellman, Paul T., Ricketts, Christopher J., Creighton, Chad J., Fei, Suzanne S., Davis, Caleb, Wheeler, David A., Murray, Bradley A., Schmidt, Laura, Vocke, Cathy D., Peto, Myron, Al Mamun, Abu Amar M., Shinbrot, Eve, Sethi, Anurag, Brooks, Samira, Rathmell, W. Kimryn, Brooks, Angela N., Hoadley, Katherine A., Robertson, A. Gordon, Brooks, Denise, Bowlby, Reanne, Sadeghi, Sara, Shen, Hui, Weisenberger, Daniel J., Bootwalla, Moiz, Baylin, Stephen B., Laird, Peter W., Cherniack, Andrew D., Saksena, Gordon, Haake, Scott, Li, Jun, Liang, Han, Lu, Yiling, Mills, Gordon B., Akbani, Rehan, Leiserson, Mark D.M., Raphael, Benjamin J., Anur, Pavana, Bottaro, Donald, Albiges, Laurence, Barnabas, Nandita, Choueiri, Toni K., Czerniak, Bogdan, Godwin, Andrew K., Hakimi, A. Ari, Ho, Thai, Hsieh, James, Ittmann, Michael, Kim, William Y., Krishnan, Bhavani, Merino, Maria J., Mills Shaw, Kenna R., Reuter, Victor E., Reznik, Ed, Shelley, Carl Simon, Shuch, Brian, Signoretti, Sabina, Srinivasan, Ramaprasad, Tamboli, Pheroze, Thomas, George, Tickoo, Satish, Burnett, Kenneth, Crain, Daniel, Gardner, Johanna, Lau, Kevin, Mallery, David, Morris, Scott, Paulauskis, Joseph D., Penny, Robert J., Shelton, Candace, Shelton, W. Troy, Sherman, Mark, Thompson, Eric, Yena, Peggy, Avedon, Melissa T., Bowen, Jay, Gastier-Foster, Julie M., Gerken, Mark, Leraas, Kristen M., Lichtenberg, Tara M., Ramirez, Nilsa C., Santos, Tracie, Wise, Lisa, Zmuda, Erik, Demchok, John A., Felau, Ina, Hutter, Carolyn M., Sheth, Margi, Sofia, Heidi J., Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean C., Zhang, Jiashan (Julia), Ayala, Brenda, Baboud, Julien, Chudamani, Sudha, Liu, Jia, Lolla, Laxmi, Naresh, Rashi
Published in The New England journal of medicine (14.01.2016)

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Comprehensive and Integrative Genomic Characterization of Hepatocellular Carcinoma

by Carlsen, Rebecca, Chuah, Eric, Clarke, Amanda, Holt, Robert A., Mayo, Michael, Schein, Jacqueline E., Thiessen, Nina, Cheung, Dorothy, Bowlby, Reanne, Shinbrot, Eve, Donehower, Lawrence A., Bowen, Jay, Helsel, Carmen, Leraas, Kristen M., Wise, Lisa, Shih, Juliann, Cherniack, Andrew D., Saksena, Gordon, Pedamallu, Chandra Sekhar, Chin, Lynda, Cho, Juok, Defreitas, Timothy, Meier, Sam, Lawrence, Michael, Hu, Jianhong, Wang, Min, Morton, Donna, Korchina, Viktoriya, Lewis, Lora, Bellair, Michelle, Lee, Sandra, Shmulevich, Ilya, Zhang, Wei, Liu, Yuexin, Iype, Lisa, Makhlouf, Hala, Kakar, Sanjay, Yeh, Matthew M., Kleiner, David E., El-Serag, Hashem B., Mishra, Lopa, Ling, Shiyun, Su, Xiaoping, Chen, Jian, Tong, Pan, Aburatani, Hiroyuki, Tatsuno, Kenji, Seiser, Eric, Gao, Jianjiong, Ochoa, Angelica, Shen, Ronglai, Arora, Arshi, Radenbaugh, Amie, Moore, David D., Totoki, Yasushi, Shibata, Tatsuhiro, Yau, Christina, Slagle, Betty L., Ojesina, Akinyemi I., Koire, Amanda, Hsu, Teng-Kuei, Felau, Ina, Wang, Zhining, Yang, Liming, Zenklusen, Jean C., Hutter, Carolyn M., Sofia, Heidi J., Chudamani, Sudha, Liu, Jia, Lolla, Laxmi, Wu, Ye, Pihl, Todd, Huang, Mei, Junior, Carlos Gilberto Carlotti, Silva, Orlando de Castro, Ahn, Keun Soo, Moser, Catherine D., Giordano, Thomas J., Crain, Daniel, Curley, Erin, Morris, Scott, Paulauskis, Joseph, Shelton, Candace, Shelton, Troy, Roberts, Lewis R., Hagedorn, Curt H., O'Brien, Daniel R., Perou, Charles M., Skelly, Tara, Veluvolu, Umadevi, Balu, Saianand, Hoyle, Alan P., Jefferys, Stuart R., Meng, Shaowu, Mose, Lisle E., Simons, Janae V., Hoadley, Katherine A., Shen, Hui, Berrios, Mario, Laird, Peter W.
Published in Cell (15.06.2017)

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Comprehensive Molecular Portraits of Invasive Lobular Breast Cancer

by Ciriello, Giovanni, Gatza, Michael L., Wilkerson, Matthew D., Rhie, Suhn K., Pastore, Alessandro, McLellan, Michael, Bowlby, Reanne, Lester, Susan C., Tse, Gary M.K., Chen, Yunn-Yi, Jensen, Kristin, Johnson, Nicole B., Mills, Gordon B., Robertson, Gordon, Benz, Christopher, Sander, Chris, Hoadley, Katherine A., King, Tari A., Akbani, Rehan, Auman, J. Todd, Balasundaram, Miruna, Barr, Thomas, Beck, Andrew, Berrios, Mario, Bodenheimer, Tom, Boice, Lori, Bootwalla, Moiz S., Bowen, Jay, Bowlby, Reanne, Brooks, Denise, Cherniack, Andrew D., Chin, Lynda, Davidsen, Tanja, Demchok, John A., Dennison, Jennifer B., Ding, Li, Ferguson, Martin L., Gabriel, Stacey B., Gao, JianJiong, Gastier-Foster, Julie M., Gatza, Michael L., Gehlenborg, Nils, Gerken, Mark, Getz, Gad, Gibson, William J., Hayes, D. Neil, Heiman, David I., Hoadley, Katherine A., Holbrook, Andrea, Hoyle, Alan P., Hu, Hai, Hutter, Carolyn M., Jefferys, Stuart R., Jones, Steven J.M., Ju, Zhenlin, Laird, Peter W., Lawrence, Michael S., Leraas, Kristen M., Lin, Pei, Liu, Jia, Liu, Wenbin, Maglinte, Dennis T., Mardis, Elaine, Marra, Marco A., McAllister, Cynthia, McLellan, Michael, Meng, Shaowu, Mills, Gordon B., Mose, Lisle E., Mungall, Andrew J., Naresh, Rashi, Noble, Michael S., Olopade, Olufunmilayo, Perou, Charles M., Saksena, Gordon, Schumacher, Steven E., Ramirez, Nilsa C., Rathmell, W. Kimryn, Roach, Jeffrey, Sander, Chris, Sheth, Margi, Shi, Yan, Shih, Juliann, Shelley, Carl Simon, Simons, Janae V., Sofia, Heidi J., Sougnez, Carrie, Sun, Charlie, Van Den Berg, David J., Wan, Yunhu, Wang, Zhining, Wise, Lisa, Wiznerowicz, Maciej, Wu, Junyuan, Yang, Liming, Yau, Christina, Zack, Travis I., Zhang, Hailei, Zhang, Jiashan, Perou, Charles M.
Published in Cell (08.10.2015)

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Integrated Genomic Characterization of Papillary Thyroid Carcinoma

by Akbani, Rehan, Aksoy, B. Arman, Ally, Adrian, Balasundaram, Miruna, Bernard, Brady, Beroukhim, Rameen, Black, Aaron D., Bodenheimer, Tom, Bowen, Jay, Bristow, Christopher A., Brookens, Robin, Buda, Elizabeth, Butterfield, Yaron S.N., Carty, Sally E., Chin, Lynda, Chuah, Eric, Cibulskis, Kristian, Clarke, Amanda, Clayman, Gary L., Cope, Leslie, Copland, John A., Davidsen, Tanja, Dhir, Rajiv, Dresdner, Gideon, Eldridge, Jonathan, Eley, Greg, El-Naggar, Adel K., Fisher, Sheila, Garraway, Levi A., Getz, Gad, Gehlenborg, Nils, Gibbs, Richard A., Gomez-Hernandez, Karen, Guin, Ranabir, Harper, Hollie A., Heiman, David I., Herman, James G., Hoadley, Katherine A., Hofree, Matan, Holt, Robert A., Hoyle, Alan P., Huang, Franklin W., Ideker, Trey, Kasaian, Katayoon, Khuri, Fadlo R., Kramer, Roger, Ladanyi, Marc, Lander, Eric, Lawrence, Michael S., Lee, Darlene, Leraas, Kristen M., Ling, Shiyun, Liu, Wenbin, LiVolsi, Virginia A., Ma, Yussanne, Mahadeshwar, Harshad S., Mills, Gordon, Mose, Lisle E., Murray, Bradley A., Noble, Michael S., Owonikoko, Taofeek K., Pantazi, Angeliki, Pedamallu, Chandra Sekhar, Perou, Charles M., Prins, Jan F., Ren, Xiaojia, Reynolds, Sheila M., Robertson, A. Gordon, Rosenberg, Mara W., Rosenthal, Matthew, Schein, Jacqueline E., Seethala, Raja R., Shaw, Kenna R. Mills, Sheth, Margi, Shi, Yan, Sica, Gabriel L., Sipahimalani, Payal, Smallridge, Robert C., Sofia, Heidi J., Stuart, Joshua M., Sumer, S. Onur, Tam, Angela, Tarnuzzer, Roy, Thiessen, Nina, Thorne, Leigh, Thorsson, Vésteinn, Vandin, Fabio, Veluvolu, Umadevi, Vinco, Michelle, Voet, Doug, Weinhold, Nils, Wheeler, David, Wilson, Jocelyn, Williams, Michelle, Xu, Andrew W., Yang, Liming, Yang, Lixing, Zeng, Dong, Zhang, Jiashan (Julia), Zmuda, Erik
Published in Cell (23.10.2014)

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Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma

by Linehan, W Marston, Spellman, Paul T, Ricketts, Christopher J, Creighton, Chad J, Fei, Suzanne S, Davis, Caleb, Wheeler, David A, Murray, Bradley A, Schmidt, Laura, Vocke, Cathy D, Peto, Myron, Al Mamun, Abu Amar M, Shinbrot, Eve, Sethi, Anurag, Brooks, Samira, Rathmell, W Kimryn, Brooks, Angela N, Hoadley, Katherine A, Robertson, A Gordon, Brooks, Denise, Bowlby, Reanne, Sadeghi, Sara, Shen, Hui, Weisenberger, Daniel J, Bootwalla, Moiz, Baylin, Stephen B, Laird, Peter W, Cherniack, Andrew D, Saksena, Gordon, Haake, Scott, Li, Jun, Liang, Han, Lu, Yiling, Mills, Gordon B, Akbani, Rehan, Leiserson, Mark D M, Raphael, Benjamin J, Anur, Pavana, Bottaro, Donald, Albiges, Laurence, Barnabas, Nandita, Choueiri, Toni K, Czerniak, Bogdan, Godwin, Andrew K, Hakimi, A Ari, Ho, Thai H, Hsieh, James, Ittmann, Michael, Kim, William Y, Krishnan, Bhavani, Merino, Maria J, Mills Shaw, Kenna R, Reuter, Victor E, Reznik, Ed, Shelley, Carl S, Shuch, Brian, Signoretti, Sabina, Srinivasan, Ramaprasad, Tamboli, Pheroze, Thomas, George, Tickoo, Satish, Burnett, Kenneth, Crain, Daniel, Gardner, Johanna, Lau, Kevin, Mallery, David, Morris, Scott, Paulauskis, Joseph D, Penny, Robert J, Shelton, Candace, Shelton, W Troy, Sherman, Mark, Thompson, Eric, Yena, Peggy, Avedon, Melissa T, Bowen, Jay, Gastier-Foster, Julie M, Gerken, Mark, Leraas, Kristen M, Lichtenberg, Tara M, Ramirez, Nilsa C, Santos, Tracie, Wise, Lisa, Zmuda, Erik, Demchok, John A, Felau, Ina, Hutter, Carolyn M, Sheth, Margi, Sofia, Heidi J, Tarnuzzer, Roy, Wang, Zhining, Yang, Liming, Zenklusen, Jean C, Zhang, Jiashan, Ayala, Brenda, Baboud, Julien, Chudamani, Sudha, Liu, Jia, Lolla, Laxmi, Naresh, Rashi
Published in The New England journal of medicine (14.01.2016)

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Integrated Molecular Characterization of Uterine Carcinosarcoma

by Cherniack, Andrew D., Murray, Bradley A., Hu, Xin, Ling, Shiyun, Soslow, Robert A., Zuna, Rosemary E., Laird, Peter W., Kucherlapati, Raju, Mills, Gordon B., Akbani, Rehan, Auman, J. Todd, Balasundaram, Miruna, Balu, Saianand, Baylin, Stephen B., Bodenheimer, Tom, Bogomolniy, Faina, Brooks, Denise, Carlsen, Rebecca, Cherniack, Andrew D., Cho, Juok, Chuah, Eric, Chudamani, Sudha, David, Mutch, Ferguson, Martin L., Frick, Jessica, Gabriel, Stacey, Gehlenborg, Nils, Gerken, Mark, Getz, Gad, Gupta, Manaswi, Heiman, David I., Hess, Julian, Hoffmann, Robert, Holt, Robert A., Hu, Xin, Hutter, Carolyn M., Jefferys, Stuart R., Kanchi, Rupa S., Kandoth, Cyriac, Kerr, Sarah, Kim, Jaegil, Lai, Phillip H., Laird, Peter W., Lander, Eric, Lawrence, Michael S., Lee, Darlene, Leshchiner, Ignaty, Levine, Douglas A., Lichtenberg, Tara M., Ling, Shiyun, Liu, Jia, Liu, Wenbin, Lolla, Laxmi, Lu, Yiling, Ma, Yussanne, Maglinte, Dennis T., Marra, Marco A., Mayo, Michael, Meng, Shaowu, Meyerson, Matthew, Moore, Richard A., Mose, Lisle E., Mungall, Karen, Murray, Bradley A., Naresh, Rashi, Parker, Joel S., Perou, Charles M., Radenbaugh, Amie J., Ramirez, Nilsa C., Rathmell, W. Kimryn, Roach, Jeffrey, Robertson, A. Gordon, Sadeghi, Sara, Saksena, Gordon, Salvesen, Helga B., Sheth, Margi, Shi, Yan, Shih, Juliann, Skelly, Tara, Sofia, Heidi J., Soloway, Matthew G., Sun, Charlie, Tan, Donghui, Tarnuzzer, Roy, Thorne, Leigh B., Tseng, Jill, Veluvolu, Umadevi, Verhaak, Roel G.W., Voet, Doug, Wan, Yunhu, Wang, Chen, Weisenberger, Daniel J., Wilkerson, Matthew D., Winterhoff, Boris, Wong, Tina, Yang, Liming, Zhang, Hailei, Zhu, Jing-chun, Zuna, Rosemary E., Weinstein, John N.
Published in Cancer cell (13.03.2017)

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Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma

by Robertson, A. Gordon, Gibb, Ewan A., Oba, Junna, Uzunangelov, Vladislav, Walter, Vonn, Danilova, Ludmila, Kimes, Patrick K., Babur, Ozgun, Akbani, Rehan, Bristow, Christopher A., Iype, Lisa, Beroukhim, Rameen, Bowen, Jay, Bowlby, Reanne, Bristow, Christopher A., Carlsen, Rebecca, Cebulla, Colleen M., Chin, Lynda, Chuah, Eric, Chudamani, Sudha, Cibulskis, Carrie, Cibulskis, Kristian, Cope, Leslie, Coupland, Sarah E., Defreitas, Timothy, Demchok, John A., Desjardins, Laurence, Esmaeli, Bita, Felau, Ina, Ferguson, Martin L., Frazer, Scott, Gehlenborg, Nils, Gerken, Mark, Getz, Gad, Gibb, Ewan A., Griewank, Klaus G., Heiman, David I., Helsel, Carmen, Hu, Xin, Jefferys, Stuart R., Leraas, Kristen M., Lichtenberg, Tara M., Liu, Jia, Iype, Lisa, Ma, Yussanne, Mariani, Odette, Marra, Marco A., Meier, Sam, Meyerson, Matthew, Mungall, Andrew J., Mungall, Karen L., Murray, Bradley A., Naresh, Rashi, Oba, Junna, Pantazi, Angeliki, Parfenov, Michael, Park, Peter J., Protopopov, Alexei, Radenbaugh, Amie, Rai, Karan, Ramirez, Nilsa C., Ren, Xiaojia, Reynolds, Sheila M., Roach, Jeffrey, Robertson, A. Gordon, Schadendorf, Dirk, Schumacher, Steven E., Seidman, Jonathan, Seth, Sahil, Sethi, Geetika, Sheth, Margi, Shi, Yan, Singh, Arun D., Sipahimalani, Payal, Soloway, Matthew G., Sun, Huandong, Tan, Donghui, Tang, Ming, Tse, Kane, Uzunangelov, Vladislav, Verhaak, Roel G.W., Walter, Vonn, Wan, Yunhu, Weinstein, John N., Williams, Michelle D., Woodman, Scott E., Yang, Liming, Yang, Lixing, Yau, Christina, Zhang, Hailei, Zmuda, Erik, Benz, Christopher, Mills, Gordon B., Verhaak, Roel G.W., Gershenwald, Jeffrey E., Schoenfield, Lynn, Abdel-Rahman, Mohamed H., Stern, Marc-Henri, Cebulla, Colleen M., Woodman, Scott E.
Published in Cancer cell (14.08.2017)

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