A benchmark study of deep learning-based multi-omics data fusion methods for cancer
Leng, Dongjin, Zheng, Linyi, Wen, Yuqi, Zhang, Yunhao, Wu, Lianlian, Wang, Jing, Wang, Meihong, Zhang, Zhongnan, He, Song, Bo, Xiaochen
Published in Genome Biology (09.08.2022)
Published in Genome Biology (09.08.2022)
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Journal Article
Associations of sleep problems with asthma and allergic rhinitis among Chinese preschoolers
Ma, Ying, Tang, Jie, Wen, Yuqi, Hu, Yan, Liang, Jingjing, Jiang, Lin, Xing, Yanfei, Song, Yanyan
Published in Scientific reports (16.05.2022)
Published in Scientific reports (16.05.2022)
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Journal Article
NeRD: a multichannel neural network to predict cellular response of drugs by integrating multidimensional data
Cheng, Xiaoxiao, Dai, Chong, Wen, Yuqi, Wang, Xiaoqi, Bo, Xiaochen, He, Song, Peng, Shaoliang
Published in BMC medicine (17.10.2022)
Published in BMC medicine (17.10.2022)
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Journal Article
Multi-dimensional data integration algorithm based on random walk with restart
Wen, Yuqi, Song, Xinyu, Yan, Bowei, Yang, Xiaoxi, Wu, Lianlian, Leng, Dongjin, He, Song, Bo, Xiaochen
Published in BMC bioinformatics (27.02.2021)
Published in BMC bioinformatics (27.02.2021)
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Journal Article
DEML: Drug Synergy and Interaction Prediction Using Ensemble-Based Multi-Task Learning
Wang, Zhongming, Dong, Jiahui, Wu, Lianlian, Dai, Chong, Wang, Jing, Wen, Yuqi, Zhang, Yixin, Yang, Xiaoxi, He, Song, Bo, Xiaochen
Published in Molecules (Basel, Switzerland) (14.01.2023)
Published in Molecules (Basel, Switzerland) (14.01.2023)
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Journal Article
Discovery of novel therapeutic properties of drugs from transcriptional responses based on multi-label classification
Xie, Lingwei, He, Song, Wen, Yuqi, Bo, Xiaochen, Zhang, Zhongnan
Published in Scientific reports (02.08.2017)
Published in Scientific reports (02.08.2017)
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Journal Article
COMSUC: A web server for the identification of consensus molecular subtypes of cancer based on multiple methods and multi-omics data
He, Song, Song, Xinyu, Yang, Xiaoxi, Yu, Jijun, Wen, Yuqi, Wu, Lianlian, Yan, Bowei, Feng, Jiannan, Bo, Xiaochen
Published in PLoS computational biology (18.03.2021)
Published in PLoS computational biology (18.03.2021)
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Journal Article
LncRNA-mRNA co-expression analysis revealed 8 core lncRNAs in rheumatoid arthritis of collagen-induced arthritis rats
Wen, Yuqi, He, Cailin, Wang, Yang, Zeng, Siqin, Yang, Bo, Xiong, Xingui
Published in BMC medical genomics (26.11.2022)
Published in BMC medical genomics (26.11.2022)
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Journal Article
Xenogenous implanted dental follicle stem cells promote periodontal regeneration through inducing the N2 phenotype of neutrophils
Liu, Li, Wen, Yuqi, Chen, Liangrui, Li, Maoxue, Yu, Jialu, Tian, Weidong, Wu, Yafei, Guo, Shujuan
Published in Stem cell research & therapy (26.08.2024)
Published in Stem cell research & therapy (26.08.2024)
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Journal Article
Detection of Virus-Related Sequences Associated With Potential Etiologies of Hepatitis in Liver Tissue Samples From Rats, Mice, Shrews, and Bats
He, Wenqiao, Gao, Yuhan, Wen, Yuqi, Ke, Xuemei, Ou, Zejin, Li, Yongzhi, He, Huan, Chen, Qing
Published in Frontiers in microbiology (08.06.2021)
Published in Frontiers in microbiology (08.06.2021)
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Journal Article
Association Between Oral Microbiota and Human Brain Glioma Grade: A Case-Control Study
Wen, Yuqi, Feng, Le, Wang, Haorun, Zhou, Hu, Li, Qianqian, Zhang, Wenyan, Wang, Ming, Li, Yeming, Luan, Xingzhao, Jiang, Zengliang, Chen, Ligang, Zhou, Jie
Published in Frontiers in microbiology (18.10.2021)
Published in Frontiers in microbiology (18.10.2021)
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Journal Article
An interpretable artificial intelligence framework for designing synthetic lethality-based anti-cancer combination therapies
Wang, Jing, Wen, Yuqi, Zhang, Yixin, Wang, Zhongming, Jiang, Yuyang, Dai, Chong, Wu, Lianlian, Leng, Dongjin, He, Song, Bo, Xiaochen
Published in Journal of advanced research (01.11.2024)
Published in Journal of advanced research (01.11.2024)
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Journal Article
MOCSS: Multi-omics data clustering and cancer subtyping via shared and specific representation learning
Chen, Yuxin, Wen, Yuqi, Xie, Chenyang, Chen, Xinjian, He, Song, Bo, Xiaochen, Zhang, Zhongnan
Published in iScience (18.08.2023)
Published in iScience (18.08.2023)
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Journal Article
Exploring the classification of cancer cell lines from multiple omic views
Yang, Xiaoxi, Wen, Yuqi, Song, Xinyu, He, Song, Bo, Xiaochen
Published in PeerJ (San Francisco, CA) (18.08.2020)
Published in PeerJ (San Francisco, CA) (18.08.2020)
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Journal Article
Mathematical modeling of two strains tuberculosis and COVID-19 vaccination model: a co-infection study with cost-effectiveness analysis
Appiah, Raymond Fosu, Jin, Zhen, Yang, Junyuan, Asamoah, Joshua Kiddy K., Wen, Yuqi
Published in Frontiers in applied mathematics and statistics (09.05.2024)
Published in Frontiers in applied mathematics and statistics (09.05.2024)
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Journal Article
PIMD: An Integrative Approach for Drug Repositioning Using Multiple Characterization Fusion
He, Song, Wen, Yuqi, Yang, Xiaoxi, Liu, Zhen, Song, Xinyu, Huang, Xin, Bo, Xiaochen
Published in Genomics, proteomics & bioinformatics (01.10.2020)
Published in Genomics, proteomics & bioinformatics (01.10.2020)
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Journal Article
Trends in urban/rural inequalities in physical growth among Chinese children over three decades of urbanization in Guangzhou: 1985-2015
Hu, Yan, Lin, Weiqun, Tan, Xuying, Liu, Yu, Wen, Yuqi, Xing, Yanfei, Ma, Ying, Liu, Huiyan, Song, Yanyan, Liang, Jingjing, Lam, Kin Bong Hubert, Lin, Suifang
Published in BMC public health (31.07.2020)
Published in BMC public health (31.07.2020)
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Journal Article
Identification and characterization of human hematopoietic mesoderm
Wen, Yuqi, Zhao, Jingjing, Zhang, Runqing, Liu, Fan, Chen, Xiaoyuan, Wu, Dan, Wang, Mengge, Liu, Cuicui, Su, Pei, Meng, Panpan, Zhang, Yiyue, Gao, Xin, Wang, Lu, Wang, Hongtao, Zhou, Jiaxi
Published in Science China. Life sciences (01.02.2024)
Published in Science China. Life sciences (01.02.2024)
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