High throughput Protein Fold Identification by Using Experimental Constraints Derived from Intramolecular Cross-Links and Mass Spectrometry
Young, Malin M., Tang, Ning, Hempel, Judith C., Oshiro, Connie M., Taylor, Eric W., Kuntz, Irwin D., Gibson, Bradford W., Dollinger, Gavin
Published in Proceedings of the National Academy of Sciences - PNAS (23.05.2000)
Published in Proceedings of the National Academy of Sciences - PNAS (23.05.2000)
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Journal Article
Computer-assisted Mutagenesis of Ecotin to Engineer Its Secondary Binding Site for Urokinase Inhibition
Laboissière, Martha C.A., Young, Malin M., Pinho, Rilva G., Todd, Stephen, Fletterick, Robert J., Kuntz, Irwin, Craik, Charles S.
Published in The Journal of biological chemistry (19.07.2002)
Published in The Journal of biological chemistry (19.07.2002)
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Journal Article
Partial Acetylation of Lysine Residues Improves Intraprotein Cross-Linking
Guo, Xin, Bandyopadhyay, Pradipta, Schilling, Birgit, Young, Malin M, Fujii, Naoaki, Aynechi, Tiba, Guy, R. Kiplin, Kuntz, Irwin D, Gibson, Bradford W
Published in Analytical chemistry (Washington) (15.02.2008)
Published in Analytical chemistry (Washington) (15.02.2008)
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Journal Article
Structural model of the CopA copper ATPase of Enterococcus hirae based on chemical cross-linking
Lübben, Mathias, Portmann, Reto, Kock, Gerd, Stoll, Raphael, Young, Malin M, Solioz, Marc
Published in Biometals (01.04.2009)
Published in Biometals (01.04.2009)
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Journal Article
Top-Down Characterization of Nucleic Acids Modified by Structural Probes Using High-Resolution Tandem Mass Spectrometry and Automated Data Interpretation
Kellersberger, Katherine A, Yu, Eizadora, Kruppa, Gary H, Young, Malin M, Fabris, Daniele
Published in Analytical chemistry (Washington) (01.05.2004)
Published in Analytical chemistry (Washington) (01.05.2004)
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Journal Article
A Top-down method for the determination of residue-specific solvent accessibility in proteins
Novak, Petr, Kruppa, Gary H., Young, Malin M., Schoeniger, Joe
Published in Journal of mass spectrometry. (01.03.2004)
Published in Journal of mass spectrometry. (01.03.2004)
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Journal Article
PostDOCK: A Structural, Empirical Approach to Scoring Protein Ligand Complexes
Springer, Clayton, Adalsteinsson, Helgi, Young, Malin M, Kegelmeyer, Philip W, Roe, Diana C
Published in Journal of medicinal chemistry (03.11.2005)
Published in Journal of medicinal chemistry (03.11.2005)
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Journal Article
Structure and dynamics of dark‐state bovine rhodopsin revealed by chemical cross‐linking and high‐resolution mass spectrometry
Jacobsen, Richard B., Sale, Kenneth L., Ayson, Marites J., Novak, Petr, Hong, Joohee, Lane, Pamela, Wood, Nichole L., Kruppa, Gary H., Young, Malin M., Schoeniger, Joseph S.
Published in Protein science (01.06.2006)
Published in Protein science (01.06.2006)
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Journal Article
The Collaboratory for MS3D: A New Cyberinfrastructure for the Structural Elucidation of Biological Macromolecules and Their Assemblies Using Mass Spectrometry-Based Approaches
Yu, Eizadora T, Hawkins, Arie, Kuntz, Irwin D, Rahn, Larry A, Rothfuss, Andrew, Sale, Kenneth, Young, Malin M, Yang, Christine L, Pancerella, Carmen M, Fabris, Daniele
Published in Journal of proteome research (01.11.2008)
Published in Journal of proteome research (01.11.2008)
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Journal Article
Unambiguous Assignment of Intramolecular Chemical Cross-Links in Modified Mammalian Membrane Proteins by Fourier Transform-Tandem Mass Spectrometry
Novak, Petr, Haskins, William E, Ayson, Marites J, Jacobsen, Richard B, Schoeniger, Joseph S, Leavell, Michael D, Young, Malin M, Kruppa, Gary H
Published in Analytical chemistry (Washington) (15.08.2005)
Published in Analytical chemistry (Washington) (15.08.2005)
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Journal Article
Optimal bundling of transmembrane helices using sparse distance constraints
Sale, Ken, Faulon, Jean‐Loup, Gray, Genetha A., Schoeniger, Joseph S., Young, Malin M.
Published in Protein science (01.10.2004)
Published in Protein science (01.10.2004)
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Journal Article
Optimizing an Empirical Scoring Function for Transmembrane Protein Structure Determination
Gray, Genetha Anne, Kolda, Tamara G, Sale, Ken, Young, Malin M
Published in INFORMS journal on computing (01.11.2004)
Published in INFORMS journal on computing (01.11.2004)
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Journal Article
A top-down approach to protein structure studies using chemical cross-linking and Fourier transform mass spectrometry
Novak, Petr, Young, Malin M, Schoeniger, Joseph S, Kruppa, Gary H
Published in European journal of mass spectrometry (Chichester, England) (01.01.2003)
Published in European journal of mass spectrometry (Chichester, England) (01.01.2003)
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Journal Article
Design, docking, and evaluation of multiple libraries against multiple targets
Lamb, Michelle L., Burdick, Keith W., Toba, Samuel, Young, Malin M., Skillman, A. Geoffrey, Zou, Xiaoqin, Arnold, James R., Kuntz, Irwin D.
Published in Proteins, structure, function, and bioinformatics (15.02.2001)
Published in Proteins, structure, function, and bioinformatics (15.02.2001)
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Journal Article