Systematic elucidation of genetic mechanisms underlying cholesterol uptake
Hamilton, Marisa C., Fife, James D., Akinci, Ersin, Yu, Tian, Khowpinitchai, Benyapa, Cha, Minsun, Barkal, Sammy, Thi, Thi Tun, Yeo, Grace H.T., Ramos Barroso, Juan Pablo, Francoeur, Matthew Jake, Velimirovic, Minja, Gifford, David K., Lettre, Guillaume, Yu, Haojie, Cassa, Christopher A., Sherwood, Richard I.
Published in Cell genomics (10.05.2023)
Published in Cell genomics (10.05.2023)
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LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets
Wilm, Andreas, Aw, Pauline Poh Kim, Bertrand, Denis, Yeo, Grace Hui Ting, Ong, Swee Hoe, Wong, Chang Hua, Khor, Chiea Chuen, Petric, Rosemary, Hibberd, Martin Lloyd, Nagarajan, Niranjan
Published in Nucleic acids research (01.12.2012)
Published in Nucleic acids research (01.12.2012)
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A probabilistic model to predict clinical phenotypic traits from genome sequencing
Chen, Yun-Ching, Douville, Christopher, Wang, Cheng, Niknafs, Noushin, Yeo, Grace, Beleva-Guthrie, Violeta, Carter, Hannah, Stenson, Peter D, Cooper, David N, Li, Biao, Mooney, Sean, Karchin, Rachel
Published in PLoS computational biology (01.09.2014)
Published in PLoS computational biology (01.09.2014)
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Journal Article
Disentangled Representations of Cellular Identity
Wang, Ziheng, Yeo, Grace H. T., Sherwood, Richard, Gifford, David
Published in Research in Computational Molecular Biology (2019)
Published in Research in Computational Molecular Biology (2019)
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Book Chapter
Detection of gene cis-regulatory element perturbations in single-cell transcriptomes
Yeo, Grace Hui Ting, Juez, Oscar, Chen, Qing, Banerjee, Budhaditya, Chu, Lendy, Shen, Max W, Sabry, May, Logister, Ive, Sherwood, Richard I, Gifford, David K
Published in PLoS computational biology (12.03.2021)
Published in PLoS computational biology (12.03.2021)
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Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges
Cai, Binghuang, Li, Biao, Kiga, Nikki, Thusberg, Janita, Bergquist, Timothy, Chen, Yun‐Ching, Niknafs, Noushin, Carter, Hannah, Tokheim, Collin, Beleva‐Guthrie, Violeta, Douville, Christopher, Bhattacharya, Rohit, Yeo, Hui Ting Grace, Fan, Jean, Sengupta, Sohini, Kim, Dewey, Cline, Melissa, Turner, Tychele, Diekhans, Mark, Zaucha, Jan, Pal, Lipika R., Cao, Chen, Yu, Chen‐Hsin, Yin, Yizhou, Carraro, Marco, Giollo, Manuel, Ferrari, Carlo, Leonardi, Emanuela, Tosatto, Silvio C.E., Bobe, Jason, Ball, Madeleine, Hoskins, Roger A., Repo, Susanna, Church, George, Brenner, Steven E., Moult, John, Gough, Julian, Stanke, Mario, Karchin, Rachel, Mooney, Sean D.
Published in Human mutation (01.09.2017)
Published in Human mutation (01.09.2017)
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Journal Article
Systematic elucidation of genetic mechanisms underlying cholesterol uptake
Hamilton, Marisa C, Fife, James D, Akinci, Ersin, Tian, Yu, Khowpinitchai, Benyapa, Cha, Minsun, Barkal, Sammy, Thi, Tun Thi, Yeo, Grace, Juan Pablo Ramos Barroso, Francoeur, Matthew Jake, Velimirovic, Minja, Gifford, David K, Lettre, Guillaume, Yu, Haojie, Cassa, Christopher A, Sherwood, Richard I
Published in bioRxiv (10.01.2023)
Published in bioRxiv (10.01.2023)
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Paper
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Delineating histomorphological signatures of iCMS subtypes in colorectal cancer using multiplexed fluorescence-in-situ hybridization
Joanito, Ignasius, Bo, Li, Yeo, Grace Hui Ting, Lakshmanan, Vairavan, Laurensia, Yurike, Tan, Iain BeeHaut, Prabhakar, Shyam
Published in Journal of clinical oncology (01.06.2024)
Published in Journal of clinical oncology (01.06.2024)
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Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer
Joanito, Ignasius, Wirapati, Pratyaksha, Zhao, Nancy, Nawaz, Zahid, Yeo, Grace, Lee, Fiona, Eng, Christine L. P., Macalinao, Dominique Camat, Kahraman, Merve, Srinivasan, Harini, Lakshmanan, Vairavan, Verbandt, Sara, Tsantoulis, Petros, Gunn, Nicole, Venkatesh, Prasanna Nori, Poh, Zhong Wee, Nahar, Rahul, Oh, Hsueh Ling Janice, Loo, Jia Min, Chia, Shumei, Cheow, Lih Feng, Cheruba, Elsie, Wong, Michael Thomas, Kua, Lindsay, Chua, Clarinda, Nguyen, Andy, Golovan, Justin, Gan, Anna, Lim, Wan-Jun, Guo, Yu Amanda, Yap, Choon Kong, Tay, Brenda, Hong, Yourae, Chong, Dawn Qingqing, Chok, Aik-Yong, Park, Woong-Yang, Han, Shuting, Chang, Mei Huan, Seow-En, Isaac, Fu, Cherylin, Mathew, Ronnie, Toh, Ee-Lin, Hong, Lewis Z., Skanderup, Anders Jacobsen, DasGupta, Ramanuj, Ong, Chin-Ann Johnny, Lim, Kiat Hon, Tan, Emile K. W., Koo, Si-Lin, Leow, Wei Qiang, Tejpar, Sabine, Prabhakar, Shyam, Tan, Iain Beehuat
Published in Nature genetics (01.07.2022)
Published in Nature genetics (01.07.2022)
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A Multiplexed Barcodelet Single-Cell RNA-Seq Approach Elucidates Combinatorial Signaling Pathways that Drive ESC Differentiation
Yeo, Grace Hui Ting, Lin, Lin, Qi, Celine Yueyue, Cha, Minsun, Gifford, David K., Sherwood, Richard I.
Published in Cell stem cell (04.06.2020)
Published in Cell stem cell (04.06.2020)
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A Probabilistic Model to Predict Clinical Phenotypic Traits from Genome Sequencing: e1003825
Chen, Yun-Ching, Douville, Christopher, Wang, Cheng, Niknafs, Noushin, Yeo, Grace, Beleva-Guthrie, Violeta, Carter, Hannah, Stenson, Peter D, Cooper, David N, Li, Biao, Mooney, Sean, Karchin, Rachel
Published in PLoS computational biology (01.09.2014)
Published in PLoS computational biology (01.09.2014)
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Journal Article
Systematic elucidation of genetic mechanisms underlying cholesterol uptake
Hamilton, Marisa C, Fife, James D, Akinci, Ersin, Yu, Tian, Khowpinitchai, Benyapa, Cha, Minsun, Barkal, Sammy, Thi, Thi Tun, Yeo, Grace H T, Ramos Barroso, Juan Pablo, Jake Francoeur, Matthew, Velimirovic, Minja, Gifford, David K, Lettre, Guillaume, Yu, Haojie, Cassa, Christopher A, Sherwood, Richard I
Published in bioRxiv : the preprint server for biology (10.01.2023)
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Published in bioRxiv : the preprint server for biology (10.01.2023)
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Value exists for the investor who can look beyond the stereotypes
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Trade Publication Article
Elucidation of remdesivir cytotoxicity pathways through genome-wide CRISPR-Cas9 screening and transcriptomics
Akinci, Ersin, Cha, Minsun, Lin, Lin, Yeo, Grace, Hamilton, Marisa C, Donahue, Callie J, Bermudez-Cabrera, Heysol C, Zanetti, Larissa C, Chen, Maggie, Barkal, Sammy A, Khowpinitchai, Benyapa, Chu, Nam, Velimirovic, Minja, Jodhani, Rikita, Fife, James D, Sovrovic, Miha, Cole, Philip A, Davey, Robert A, Cassa, Christopher A, Sherwood, Richard I
Published in bioRxiv (28.08.2020)
Published in bioRxiv (28.08.2020)
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Integrative multi-omics landscape of fluoxetine action across 27 brain regions reveals global increase in energy metabolism and region-specific chromatin remodelling
Rayan, Nirmala Arul, Kumar, Vibhor, Aow, Jonathan, Rastegar, Naghmeh, Lim, Michelle Gek Liang, O'Toole, Nicholas, Aliwarga, Edita, Arcego, Danusa Mar, Yeo, Hui Ting Grace, Wong, Jen Yi, Lee, May Yin, Schmidt, Florian, Haja, Hajira Shreen, Tam, Wai Leong, Zhang, Tie-Yuan, Diorio, Josie, Anacker, Christoph, Hen, Rene, Parent, Carine, Meaney, Michael J, Prabhakar, Shyam
Published in Molecular psychiatry (01.11.2022)
Published in Molecular psychiatry (01.11.2022)
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Slurry hydroconversion and coking of heavy oils
Yeo Grace Shi Qian, Smiley Randolph J, Kovvali Anjaneya Sarma, Hammond David G
Year of Publication 16.01.2018
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Year of Publication 16.01.2018
Patent
SLURRY HYDROCONVERSION AND COKING OF HEAVY OILS
SMILEY RANDOLPH J, HAMMOND DAVID G, KOVVALI ANJANEYA SARMA, YEO GRACE SHI QIAN
Year of Publication 08.01.2015
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Year of Publication 08.01.2015
Patent
SLURRY HYDROCONVERSION AND COKING OF HEAVY OILS
SMILEY, RANDOLPH, J, HAMMOND, DAVID, GEORGE, KOVVALI, ANJANEYA, SARMA, YEO, GRACE, SHI QIAN
Year of Publication 24.12.2014
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Year of Publication 24.12.2014
Patent