GoPeaks: histone modification peak calling for CUT&Tag
Yashar, William M, Kong, Garth, VanCampen, Jake, Curtiss, Brittany M, Coleman, Daniel J, Carbone, Lucia, Yardimci, Galip Gürkan, Maxson, Julia E, Braun, Theodore P
Published in Genome Biology (04.07.2022)
Published in Genome Biology (04.07.2022)
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Journal Article
Micelle-Formulated Juglone Effectively Targets Pancreatic Cancer and Remodels the Tumor Microenvironment
Shah, Vidhi M, Rizvi, Syed, Smith, Alexander, Tsuda, Motoyuki, Krieger, Madeline, Pelz, Carl, MacPherson, Kevin, Eng, Jenny, Chin, Koei, Munks, Michael W, Daniel, Colin J, Al-Fatease, Adel, Yardimci, Galip Gürkan, Langer, Ellen M, Brody, Jonathan R, Sheppard, Brett C, Alani, Adam Wg, Sears, Rosalie C
Published in Pharmaceutics (21.11.2023)
Published in Pharmaceutics (21.11.2023)
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Journal Article
Comparison of Effectiveness of Electrocautery and Cryotherapy in Partial Matrixectomy After Partial Nail Extraction in the Treatment of Ingrown Nails
Küçüktaş, Murat, Kutlubay, Zekayi, Yardimci, Gürkan, Khatib, Rashid, Tüzün, Yalçın
Published in Dermatologic surgery (01.02.2013)
Published in Dermatologic surgery (01.02.2013)
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Journal Article
GenomeDISCO: a concordance score for chromosome conformation capture experiments using random walks on contact map graphs
Ursu, Oana, Boley, Nathan, Taranova, Maryna, Wang, Y X Rachel, Yardimci, Galip Gurkan, Stafford Noble, William, Kundaje, Anshul
Published in Bioinformatics (15.08.2018)
Published in Bioinformatics (15.08.2018)
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Journal Article
Evaluation of Effectiveness of Cryotherapy on the Treatment of Cutaneous Kaposi's Sarcoma
Kutlubay, Zekayi, Küçüktaş, Murat, Yardımcı, Gürkan, Engin, Burhan, Serdaroğlu, Server
Published in Dermatologic surgery (01.10.2013)
Published in Dermatologic surgery (01.10.2013)
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Journal Article
Unsupervised embedding of single-cell Hi-C data
Liu, Jie, Lin, Dejun, Yardımcı, Galip Gürkan, Noble, William Stafford
Published in Bioinformatics (01.07.2018)
Published in Bioinformatics (01.07.2018)
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Journal Article
A dystrophic calcinosis cutis case treated with CO2 laser
Kutlubay, Zekay, Yardimci, Gürkan, Gokler, Gökhan, Engin, Burhan
Published in Journal of cosmetic and laser therapy (01.06.2014)
Published in Journal of cosmetic and laser therapy (01.06.2014)
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Journal Article
Treatment of Phthiriasis Palpebrarum and Crab Louse: Petrolatum Jelly and 1% Permethrin Shampoo
Atalay, Eray, Yildirim, Isik, Yardimci, Gurkan, Karabela, Yunus, Karabela, Semsi Nur
Published in Case Reports in Medicine (01.01.2015)
Published in Case Reports in Medicine (01.01.2015)
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Journal Article
High-content single-cell combinatorial indexing
Mulqueen, Ryan M, Pokholok, Dmitry, O'Connell, Brendan L, Thornton, Casey A, Zhang, Fan, O'Roak, Brian J, Link, Jason, Yardımcı, Galip Gürkan, Sears, Rosalie C, Steemers, Frank J, Adey, Andrew C
Published in Nature biotechnology (01.12.2021)
Published in Nature biotechnology (01.12.2021)
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Journal Article
Evaluation of effectiveness of erbium:yttrium-aluminum-garnet laser on atrophic facial acne scars with 22-MHz digital ultrasonography in a Turkish population
Engİn, Burhan, Kutlubay, Zekayi, Karakuş, Özge, Yardimci, Gürkan, Doğan, Zafer, Tüzün, Yalçın, Serdaroğlu, Server
Published in Journal of dermatology (01.12.2012)
Published in Journal of dermatology (01.12.2012)
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Journal Article
Multicenter integrated analysis of noncoding CRISPRi screens
Yao, David, Tycko, Josh, Oh, Jin Woo, Bounds, Lexi R, Gosai, Sager J, Lataniotis, Lazaros, Mackay-Smith, Ava, Doughty, Benjamin R, Gabdank, Idan, Schmidt, Henri, Guerrero-Altamirano, Tania, Siklenka, Keith, Guo, Katherine, White, Alexander D, Youngworth, Ingrid, Andreeva, Kalina, Ren, Xingjie, Barrera, Alejandro, Luo, Yunhai, Yardımcı, Galip Gürkan, Tewhey, Ryan, Kundaje, Anshul, Greenleaf, William J, Sabeti, Pardis C, Leslie, Christina, Pritykin, Yuri, Moore, Jill E, Beer, Michael A, Gersbach, Charles A, Reddy, Timothy E, Shen, Yin, Engreitz, Jesse M, Bassik, Michael C, Reilly, Steven K
Published in Nature methods (01.04.2024)
Published in Nature methods (01.04.2024)
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Journal Article
Precancerous lesions of oral mucosa
Yardimci, Gurkan, Kutlubay, Zekayi, Engin, Burhan, Tuzun, Yalcin
Published in World journal of clinical cases (16.12.2014)
Published in World journal of clinical cases (16.12.2014)
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Journal Article
Statistical evaluation of the Rodin-Ohno hypothesis: sense/antisense coding of ancestral class I and II aminoacyl-tRNA synthetases
Chandrasekaran, Srinivas Niranj, Yardimci, Galip Gürkan, Erdogan, Ozgün, Roach, Jeffrey, Carter, Jr, Charles W
Published in Molecular biology and evolution (01.07.2013)
Published in Molecular biology and evolution (01.07.2013)
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Journal Article
Integrative detection and analysis of structural variation in cancer genomes
Dixon, Jesse R, Xu, Jie, Dileep, Vishnu, Zhan, Ye, Song, Fan, Le, Victoria T, Yardımcı, Galip Gürkan, Chakraborty, Abhijit, Bann, Darrin V, Wang, Yanli, Clark, Royden, Zhang, Lijun, Yang, Hongbo, Liu, Tingting, Iyyanki, Sriranga, An, Lin, Pool, Christopher, Sasaki, Takayo, Rivera-Mulia, Juan Carlos, Ozadam, Hakan, Lajoie, Bryan R, Kaul, Rajinder, Buckley, Michael, Lee, Kristen, Diegel, Morgan, Pezic, Dubravka, Ernst, Christina, Hadjur, Suzana, Odom, Duncan T, Stamatoyannopoulos, John A, Broach, James R, Hardison, Ross C, Ay, Ferhat, Noble, William Stafford, Dekker, Job, Gilbert, David M, Yue, Feng
Published in Nature genetics (01.10.2018)
Published in Nature genetics (01.10.2018)
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