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Published in PLoS computational biology (01.02.2022)
Published in PLoS computational biology (01.02.2022)
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Modeling signaling‐dependent pluripotency with Boolean logic to predict cell fate transitions
Yachie‐Kinoshita, Ayako, Onishi, Kento, Ostblom, Joel, Langley, Matthew A, Posfai, Eszter, Rossant, Janet, Zandstra, Peter W
Published in Molecular systems biology (01.01.2018)
Published in Molecular systems biology (01.01.2018)
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Effects of maoto (ma-huang-tang) on host lipid mediator and transcriptome signature in influenza virus infection
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Published in Scientific reports (19.02.2021)
Published in Scientific reports (19.02.2021)
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Nicotinamide mononucleotide (NMN) alleviates the poly(I:C)-induced inflammatory response in human primary cell cultures
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Published in Scientific reports (20.07.2023)
Published in Scientific reports (20.07.2023)
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Lenvatinib plus anti-PD-1 antibody combination treatment activates CD8+ T cells through reduction of tumor-associated macrophage and activation of the interferon pathway
Kato, Yu, Tabata, Kimiyo, Kimura, Takayuki, Yachie-Kinoshita, Ayako, Ozawa, Yoichi, Yamada, Kazuhiko, Ito, Junichi, Tachino, Sho, Hori, Yusaku, Matsuki, Masahiro, Matsuoka, Yukiko, Ghosh, Samik, Kitano, Hiroaki, Nomoto, Kenichi, Matsui, Junji, Funahashi, Yasuhiro
Published in PloS one (27.02.2019)
Published in PloS one (27.02.2019)
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Disease-related cellular protein networks differentially affected under different EGFR mutations in lung adenocarcinoma
Nishimura, Toshihide, Nakamura, Haruhiko, Yachie, Ayako, Hase, Takeshi, Fujii, Kiyonaga, Koizumi, Hirotaka, Naruki, Saeko, Takagi, Masayuki, Matsuoka, Yukiko, Furuya, Naoki, Kato, Harubumi, Saji, Hisashi
Published in Scientific reports (02.07.2020)
Published in Scientific reports (02.07.2020)
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LimeMap: a comprehensive map of lipid mediator metabolic pathways
Nishi, Akinori, Ohbuchi, Katsuya, Kaifuchi, Noriko, Shimobori, Chika, Kushida, Hirotaka, Yamamoto, Masahiro, Kita, Yoshihiro, Tokuoka, Suzumi M., Yachie, Ayako, Matsuoka, Yukiko, Kitano, Hiroaki
Published in NPJ systems biology and applications (27.01.2021)
Published in NPJ systems biology and applications (27.01.2021)
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Polysulfide Serves as a Hallmark of Desmoplastic Reaction to Differentially Diagnose Ductal Carcinoma In Situ and Invasive Breast Cancer by SERS Imaging
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Published in Antioxidants (20.01.2023)
Published in Antioxidants (20.01.2023)
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Publisher Correction: LimeMap: a comprehensive map of lipid mediator metabolic pathways
Nishi, Akinori, Ohbuchi, Katsuya, Kaifuchi, Noriko, Shimobori, Chika, Kushida, Hirotaka, Yamamoto, Masahiro, Kita, Yoshihiro, Tokuoka, Suzumi M., Yachie, Ayako, Matsuoka, Yukiko, Kitano, Hiroaki
Published in NPJ systems biology and applications (08.03.2021)
Published in NPJ systems biology and applications (08.03.2021)
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Artificial intelligence-based computational framework for drug-target prioritization and inference of novel repositionable drugs for Alzheimer's disease
Tsuji, Shingo, Hase, Takeshi, Yachie-Kinoshita, Ayako, Nishino, Taiko, Ghosh, Samik, Kikuchi, Masataka, Shimokawa, Kazuro, Aburatani, Hiroyuki, Kitano, Hiroaki, Tanaka, Hiroshi
Published in Alzheimer's research & therapy (03.05.2021)
Published in Alzheimer's research & therapy (03.05.2021)
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ProtoCode: Leveraging large language models (LLMs) for automated generation of machine-readable PCR protocols from scientific publications
Jiang, Shuo, Evans-Yamamoto, Daniel, Bersenev, Dennis, Palaniappan, Sucheendra K., Yachie-Kinoshita, Ayako
Published in SLAS technology (01.06.2024)
Published in SLAS technology (01.06.2024)
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Paradoxical ATP elevation in ischemic penumbra revealed by quantitative imaging mass spectrometry
Hattori, Katsuji, Kajimura, Mayumi, Hishiki, Takako, Nakanishi, Tsuyoshi, Kubo, Akiko, Nagahata, Yoshiko, Ohmura, Mitsuyo, Yachie-Kinoshita, Ayako, Matsuura, Tomomi, Morikawa, Takayuki, Nakamura, Tomomi, Setou, Mitsutoshi, Suematsu, Makoto
Published in Antioxidants & redox signaling (15.10.2010)
Published in Antioxidants & redox signaling (15.10.2010)
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Hypotaurine is an Energy-Saving Hepatoprotective Compound against Ischemia-Reperfusion Injury of the Rat Liver
Sakuragawa, Tadayuki, Hishiki, Takako, Ueno, Yuki, Ikeda, Satsuki, Soga, Tomoyoshi, Yachie-Kinoshita, Ayako, Kajimura, Mayumi, Suematsu, Makoto
Published in Journal of Clinical Biochemistry and Nutrition (01.03.2010)
Published in Journal of Clinical Biochemistry and Nutrition (01.03.2010)
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In silico modeling and metabolome analysis of long-stored erythrocytes to improve blood storage methods
Nishino, Taiko, Yachie-Kinoshita, Ayako, Hirayama, Akiyoshi, Soga, Tomoyoshi, Suematsu, Makoto, Tomita, Masaru
Published in Journal of biotechnology (01.11.2009)
Published in Journal of biotechnology (01.11.2009)
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Conference Proceeding
Artificial intelligence based computational framework for drug-target prioritization and inference of novel repositionable drugs for Alzheimer's disease
Tsuji, Shingo, Hase, Takeshi, Yachie, Ayako, Nishino, Taiko, Ghosh, Samik, Kikuchi, Masataka, Shimokawa, Kazuro, Aburatani, Hiroyuki, Kitano, Hiroaki, Tanaka, Hiroshi
Published in bioRxiv (17.07.2020)
Published in bioRxiv (17.07.2020)
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