The evolutionarily conserved piRNA-producing locus pi6 is required for male mouse fertility
Wu, Pei-Hsuan, Fu, Yu, Cecchini, Katharine, Özata, Deniz M., Arif, Amena, Yu, Tianxiong, Colpan, Cansu, Gainetdinov, Ildar, Weng, Zhiping, Zamore, Phillip D.
Published in Nature genetics (01.07.2020)
Published in Nature genetics (01.07.2020)
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Journal Article
Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes
Yu, Tianxiong, Fan, Kaili, Özata, Deniz M., Zhang, Gen, Fu, Yu, Theurkauf, William E., Zamore, Phillip D., Weng, Zhiping
Published in Nature communications (04.01.2021)
Published in Nature communications (04.01.2021)
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Journal Article
The piRNA Response to Retroviral Invasion of the Koala Genome
Yu, Tianxiong, Koppetsch, Birgit S., Pagliarani, Sara, Johnston, Stephen, Silverstein, Noah J., Luban, Jeremy, Chappell, Keith, Weng, Zhiping, Theurkauf, William E.
Published in Cell (17.10.2019)
Published in Cell (17.10.2019)
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Journal Article
A benchmark and an algorithm for detecting germline transposon insertions and measuring de novo transposon insertion frequencies
Yu, Tianxiong, Huang, Xiao, Dou, Shengqian, Tang, Xiaolu, Luo, Shiqi, Theurkauf, William E, Lu, Jian, Weng, Zhiping
Published in Nucleic acids research (07.05.2021)
Published in Nucleic acids research (07.05.2021)
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Journal Article
Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans
Özata, Deniz M., Yu, Tianxiong, Mou, Haiwei, Gainetdinov, Ildar, Colpan, Cansu, Cecchini, Katharine, Kaymaz, Yasin, Wu, Pei-Hsuan, Fan, Kaili, Kucukural, Alper, Weng, Zhiping, Zamore, Phillip D.
Published in Nature ecology & evolution (01.01.2020)
Published in Nature ecology & evolution (01.01.2020)
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Journal Article
Adaptive Evolution Targets a piRNA Precursor Transcription Network
Parhad, Swapnil S., Yu, Tianxiong, Zhang, Gen, Rice, Nicholas P., Weng, Zhiping, Theurkauf, William E.
Published in Cell reports (Cambridge) (25.02.2020)
Published in Cell reports (Cambridge) (25.02.2020)
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Journal Article
piRNA-independent transposon silencing by the Drosophila THO complex
Zhang, Gen, Yu, Tianxiong, Parhad, Swapnil S., Ho, Samantha, Weng, Zhiping, Theurkauf, William E.
Published in Developmental cell (27.09.2021)
Published in Developmental cell (27.09.2021)
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Journal Article
Epigenetic and chromosomal features drive transposon insertion in Drosophila melanogaster
Cao, Jichuan, Yu, Tianxiong, Xu, Bo, Hu, Zhongren, Zhang, Xiao-ou, Theurkauf, William E, Weng, Zhiping
Published in Nucleic acids research (21.03.2023)
Published in Nucleic acids research (21.03.2023)
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Journal Article
A-MYB/TCFL5 regulatory architecture ensures the production of pachytene piRNAs in placental mammals
Yu, Tianxiong, Biasini, Adriano, Cecchini, Katharine, Saflund, Martin, Mou, Haiwei, Arif, Amena, Eghbali, Atiyeh, de Rooij, Dirk, Weng, Zhiping, Zamore, Phillip D, Ozata, Deniz M
Published in RNA (Cambridge) (01.01.2023)
Published in RNA (Cambridge) (01.01.2023)
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Journal Article
The transcription factor TCFL5 responds to A-MYB to elaborate the male meiotic program in mice
Cecchini, Katharine, Biasini, Adriano, Yu, Tianxiong, Säflund, Martin, Mou, Haiwei, Arif, Amena, Eghbali, Atiyeh, Colpan, Cansu, Gainetdinov, Ildar, de Rooij, Dirk G, Weng, Zhiping, Zamore, Phillip D, Özata, Deniz M
Published in Reproduction (Cambridge, England) (01.02.2023)
Published in Reproduction (Cambridge, England) (01.02.2023)
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Journal Article
CRISPR‐induced exon skipping of β‐catenin reveals tumorigenic mutants driving distinct subtypes of liver cancer
Mou, Haiwei, Eskiocak, Onur, Özler, Kadir A., Gorman, Megan, Yue, Junjiayu, Jin, Ying, Wang, Zhikai, Gao, Ya, Janowitz, Tobias, Meyer, Hannah V., Yu, Tianxiong, Wilkinson, John E, Kucukural, Alper, Ozata, Deniz M., Beyaz, Semir
Published in The Journal of pathology (01.04.2023)
Published in The Journal of pathology (01.04.2023)
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Journal Article
YAP1 Withdrawal in Hepatoblastoma Drives Therapeutic Differentiation of Tumor Cells to Functional Hepatocyte‐Like Cells
Smith, Jordan L., Rodríguez, Tomás C., Mou, Haiwei, Kwan, Suet‐Yan, Pratt, Henry, Zhang, Xiao‐Ou, Cao, Yueying, Liang, Shunqing, Ozata, Deniz M., Yu, Tianxiong, Yin, Qiangzong, Hazeltine, Max, Weng, Zhiping, Sontheimer, Erik J., Xue, Wen
Published in Hepatology (Baltimore, Md.) (01.03.2021)
Published in Hepatology (Baltimore, Md.) (01.03.2021)
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Journal Article
Hypermigration of macrophages through the concerted action of GRA effectors on NF-κB/p38 signaling and host chromatin accessibility potentiates Toxoplasma dissemination
Ten Hoeve, Arne L, Rodriguez, Matias E, Säflund, Martin, Michel, Valentine, Magimel, Lucas, Ripoll, Albert, Yu, Tianxiong, Hakimi, Mohamed-Ali, Saeij, Jeroen P J, Ozata, Deniz M, Barragan, Antonio
Published in mBio (29.08.2024)
Published in mBio (29.08.2024)
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Journal Article
Aub, Vasa and Armi localization to phase separated nuage is dispensable for piRNA biogenesis and transposon silencing in Drosophila
Ho, Samantha, Rice, Nicholas P, Yu, Tianxiong, Weng, Zhiping, Theurkauf, William E
Published in bioRxiv : the preprint server for biology (26.07.2023)
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Published in bioRxiv : the preprint server for biology (26.07.2023)
Journal Article
Hypermigration of macrophages through the concerted action of GRA effectors on NF-κB/p38 signaling and host chromatin accessibility potentiates Toxoplasma dissemination
Ten Hoeve, Arne L, Rodriguez, Matias E, Säflund, Martin, Michel, Valentine, Magimel, Lucas, Ripoll, Albert, Yu, Tianxiong, Hakimi, Mohamed-Ali, Saeij, Jeroen P J, Ozata, Deniz M, Barragan, Antonio
Published in bioRxiv (06.02.2024)
Published in bioRxiv (06.02.2024)
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Paper
Adaptive evolution targets a piRNA precursor transcription network
Parhad, Swapnil S, Yu, Tianxiong, Zhang, Gen, Rice, Nicholas, Weng, Zhiping, Theurkauf, William
Published in bioRxiv (21.06.2019)
Published in bioRxiv (21.06.2019)
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