MoMI-G: modular multi-scale integrated genome graph browser
Yokoyama, Toshiyuki T, Sakamoto, Yoshitaka, Seki, Masahide, Suzuki, Yutaka, Kasahara, Masahiro
Published in BMC bioinformatics (05.11.2019)
Published in BMC bioinformatics (05.11.2019)
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Journal Article
Long-read sequencing for non-small-cell lung cancer genomes
Sakamoto, Yoshitaka, Xu, Liu, Seki, Masahide, Yokoyama, Toshiyuki T, Kasahara, Masahiro, Kashima, Yukie, Ohashi, Akihiro, Shimada, Yoko, Motoi, Noriko, Tsuchihara, Katsuya, Kobayashi, Susumu S, Kohno, Takashi, Shiraishi, Yuichi, Suzuki, Ayako, Suzuki, Yutaka
Published in Genome research (01.09.2020)
Published in Genome research (01.09.2020)
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Journal Article
A strategy for building and using a human reference pangenome [version 2; peer review: 2 approved]
Llamas, Bastien, Narzisi, Giuseppe, Schneider, Valerie, Audano, Peter A, Biederstedt, Evan, Blauvelt, Lon, Bradbury, Peter, Chang, Xian, Chin, Chen-Shan, Fungtammasan, Arkarachai, Clarke, Wayne E, Cleary, Alan, Ebler, Jana, Eizenga, Jordan, Sibbesen, Jonas A, Markello, Charles J, Garrison, Erik, Garg, Shilpa, Hickey, Glenn, Lazo, Gerard R, Lin, Michael F, Mahmoud, Medhat, Marschall, Tobias, Minkin, Ilia, Monlong, Jean, Musunuri, Rajeeva L, Sagayaradj, Sagayamary, Novak, Adam M, Rautiainen, Mikko, Regier, Allison, Sedlazeck, Fritz J, Siren, Jouni, Souilmi, Yassine, Wagner, Justin, Wrightsman, Travis, Yokoyama, Toshiyuki T, Zeng, Qiandong, Zook, Justin M, Paten, Benedict, Busby, Ben
Published in F1000 research (29.07.2021)
Published in F1000 research (29.07.2021)
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Journal Article
A strategy for building and using a human reference pangenome [version 1; peer review: 1 approved, 1 approved with reservations]
Llamas, Bastien, Narzisi, Giuseppe, Schneider, Valerie, Audano, Peter A, Biederstedt, Evan, Blauvelt, Lon, Bradbury, Peter, Chang, Xian, Chin, Chen-Shan, Fungtammasan, Arkarachai, Clarke, Wayne E, Cleary, Alan, Ebler, Jana, Eizenga, Jordan, Sibbesen, Jonas A, Markello, Charles J, Garrison, Erik, Garg, Shilpa, Hickey, Glenn, Lazo, Gerard R, Lin, Michael F, Mahmoud, Medhat, Marschall, Tobias, Minkin, Ilia, Monlong, Jean, Musunuri, Rajeeva L, Sagayaradj, Sagayamary, Novak, Adam M, Rautiainen, Mikko, Regier, Allison, Sedlazeck, Fritz J, Siren, Jouni, Souilmi, Yassine, Wagner, Justin, Wrightsman, Travis, Yokoyama, Toshiyuki T, Zeng, Qiandong, Zook, Justin M, Paten, Benedict, Busby, Ben
Published in F1000 research (2019)
Published in F1000 research (2019)
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Journal Article
MoMI-G: Modular Multi-scale Integrated Genome Graph Browser
Yokoyama, Toshiyuki T, Sakamoto, Yoshitaka, Seki, Masahide, Suzuki, Yutaka, Kasahara, Masahiro
Published in bioRxiv (11.03.2019)
Published in bioRxiv (11.03.2019)
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Paper
Long read sequencing reveals a novel class of structural aberrations in cancers: identification and characterization of cancerous local amplifications
Sakamoto, Yoshitaka, Liu, Xu, Seki, Masahide, Yokoyama, Toshiyuki T, Kasahara, Masahiro, Kashima, Yukie, Ohashi, Akihiro, Shimada, Yoko, Motoi, Noriko, Tsuchihara, Katsuya, Kobayashi, Susumu, Kohno, Takashi, Shiraishi, Yuichi, Suzuki, Ayako, Suzuki, Yutaka
Published in bioRxiv (29.04.2019)
Published in bioRxiv (29.04.2019)
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Paper
A chromosome-level genome assembly of a model conifer plant, the Japanese cedar, Cryptomeria japonica D. Don
Fujino, Takeshi, Yamaguchi, Katsushi, Yokoyama, Toshiyuki T, Hamanaka, Toshiya, Harazono, Yoritaka, Kamada, Hiroaki, Kobayashi, Wataru, Ujino-Ihara, Tokuko, Uchiyama, Kentaro, Matsumoto, Asako, Izuno, Ayako, Tsumura, Yoshihiko, Toyoda, Atsushi, Shigenobu, Shuji, Moriguchi, Yoshinari, Ueno, Saneyoshi, Kasahara, Masahiro
Published in bioRxiv (24.02.2023)
Published in bioRxiv (24.02.2023)
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Paper