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Published in Genome Biology (03.03.2022)
Published in Genome Biology (03.03.2022)
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The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
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Published in Nature biotechnology (01.09.2014)
Published in Nature biotechnology (01.09.2014)
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Correcting batch effects in large-scale multiomics studies using a reference-material-based ratio method
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Published in Genome Biology (07.09.2023)
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The Sequencing Quality Control 2 study: establishing community standards for sequencing in precision medicine
Mercer, Tim R, Xu, Joshua, Mason, Christopher E, Tong, Weida
Published in Genome Biology (08.11.2021)
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Enhancing pharmacogenomic data accessibility and drug safety with large language models: a case study with Llama3.1
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Published in Experimental biology and medicine (Maywood, N.J.) (03.12.2024)
Published in Experimental biology and medicine (Maywood, N.J.) (03.12.2024)
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Author Correction: Towards accurate and reliable resolution of structural variants for clinical diagnosis
Liu, Zhichao, Roberts, Ruth, Mercer, Timothy R., Xu, Joshua, Sedlazeck, Fritz J., Tong, Weida
Published in Genome Biology (20.09.2022)
Published in Genome Biology (20.09.2022)
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Study of serious adverse drug reactions using FDA-approved drug labeling and MedDRA
Wu, Leihong, Ingle, Taylor, Liu, Zhichao, Zhao-Wong, Anna, Harris, Stephen, Thakkar, Shraddha, Zhou, Guangxu, Yang, Junshuang, Xu, Joshua, Mehta, Darshan, Ge, Weigong, Tong, Weida, Fang, Hong
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Evaluating Alternative Registration Planes in Imageless, Computer-Assisted Navigation Systems for Direct Anterior Total Hip Arthroplasty
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The splicing factor RBM17 drives leukemic stem cell maintenance by evading nonsense-mediated decay of pro-leukemic factors
Liu, Lina, Vujovic, Ana, Deshpande, Nandan P., Sathe, Shashank, Anande, Govardhan, Chen, He Tian Tony, Xu, Joshua, Minden, Mark D., Yeo, Gene W., Unnikrishnan, Ashwin, Hope, Kristin J., Lu, Yu
Published in Nature communications (04.07.2022)
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Quartet DNA reference materials and datasets for comprehensively evaluating germline variant calling performance
Ren, Luyao, Duan, Xiaoke, Dong, Lianhua, Zhang, Rui, Yang, Jingcheng, Gao, Yuechen, Peng, Rongxue, Hou, Wanwan, Liu, Yaqing, Li, Jingjing, Yu, Ying, Zhang, Naixin, Shang, Jun, Liang, Fan, Wang, Depeng, Chen, Hui, Sun, Lele, Hao, Lingtong, Scherer, Andreas, Nordlund, Jessica, Xiao, Wenming, Xu, Joshua, Tong, Weida, Hu, Xin, Jia, Peng, Ye, Kai, Li, Jinming, Jin, Li, Hong, Huixiao, Wang, Jing, Fan, Shaohua, Fang, Xiang, Zheng, Yuanting, Shi, Leming
Published in Genome Biology (27.11.2023)
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Using synthetic chromosome controls to evaluate the sequencing of difficult regions within the human genome
Reis, Andre L M, Deveson, Ira W, Madala, Bindu Swapna, Wong, Ted, Barker, Chris, Xu, Joshua, Lennon, Niall, Tong, Weida, Mercer, Tim R
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Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA
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Published in Scientific reports (08.04.2024)
Published in Scientific reports (08.04.2024)
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DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates
Han, Jing, Lynne, Aaron M, David, Donna E, Tang, Hailin, Xu, Joshua, Nayak, Rajesh, Kaldhone, Pravin, Logue, Catherine M, Foley, Steven L
Published in PloS one (10.12.2012)
Published in PloS one (10.12.2012)
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Ultra-deep multi-oncopanel sequencing of benchmarking samples with a wide range of variant allele frequencies
Gong, Binsheng, Kusko, Rebecca, Jones, Wendell, Tong, Weida, Xu, Joshua
Published in Scientific data (09.06.2022)
Published in Scientific data (09.06.2022)
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Orbital approaches for treatment of carotid cavernous fistulas: A systematic review
Phan, Kevin, BSc, M Phil, Xu, Joshua, BSc, Leung, Vannessa, MBBS, Teng, Ian, B Med, Sheik-Ali, Sharaf, Maharaj, Monish, B Med, Mobbs, Ralph, MBBS, MS, FRACS, Rao, Prashanth J., MBBS, FRACS, PhD
Published in World neurosurgery (01.12.2016)
Published in World neurosurgery (01.12.2016)
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Technical advance in targeted NGS analysis enables identification of lung cancer risk-associated low frequency TP53, PIK3CA, and BRAF mutations in airway epithelial cells
Craig, Daniel J, Morrison, Thomas, Khuder, Sadik A, Crawford, Erin L, Wu, Leihong, Xu, Joshua, Blomquist, Thomas M, Willey, James C
Published in BMC cancer (11.11.2019)
Published in BMC cancer (11.11.2019)
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