Use ggbreak to Effectively Utilize Plotting Space to Deal With Large Datasets and Outliers
Xu, Shuangbin, Chen, Meijun, Feng, Tingze, Zhan, Li, Zhou, Lang, Yu, Guangchuang
Published in Frontiers in genetics (02.11.2021)
Published in Frontiers in genetics (02.11.2021)
Get full text
Journal Article
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
Wu, Tianzhi, Hu, Erqiang, Xu, Shuangbin, Chen, Meijun, Guo, Pingfan, Dai, Zehan, Feng, Tingze, Zhou, Lang, Tang, Wenli, Zhan, Li, Fu, Xiaocong, Liu, Shanshan, Bo, Xiaochen, Yu, Guangchuang
Published in Innovation (New York, NY) (28.08.2021)
Published in Innovation (New York, NY) (28.08.2021)
Get full text
Journal Article
ggmsa: a visual exploration tool for multiple sequence alignment and associated data
Zhou, Lang, Feng, Tingze, Xu, Shuangbin, Gao, Fangluan, Lam, Tommy T, Wang, Qianwen, Wu, Tianzhi, Huang, Huina, Zhan, Li, Li, Lin, Guan, Yi, Dai, Zehan, Yu, Guangchuang
Published in Briefings in bioinformatics (18.07.2022)
Published in Briefings in bioinformatics (18.07.2022)
Get full text
Journal Article
Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data
Xu, Shuangbin, Li, Lin, Luo, Xiao, Chen, Meijun, Tang, Wenli, Zhan, Li, Dai, Zehan, Lam, Tommy T., Guan, Yi, Yu, Guangchuang
Published in iMeta (01.12.2022)
Published in iMeta (01.12.2022)
Get full text
Journal Article
Reducing language barriers, promoting information absorption, and communication using fanyi
Wang, Difei, Chen, Guannan, Li, Lin, Wen, Shaodi, Xie, Zijing, Luo, Xiao, Zhan, Li, Xu, Shuangbin, Li, Junrui, Wang, Rui, Wang, Qianwen, Yu, Guangchuang
Published in Chinese medical journal (20.08.2024)
Published in Chinese medical journal (20.08.2024)
Get full text
Journal Article
Featured Gut Microbiomes Associated With the Progression of Chronic Hepatitis B Disease
Chen, Zhangran, Xie, Yurou, Zhou, Fei, Zhang, Bangzhou, Wu, Jingtong, Yang, Luxi, Xu, Shuangbin, Stedtfeld, Robert, Chen, Qiongyun, Liu, Jingjing, Zhang, Xiang, Xu, Hongzhi, Ren, Jianlin
Published in Frontiers in microbiology (20.03.2020)
Published in Frontiers in microbiology (20.03.2020)
Get full text
Journal Article
MicrobiotaProcess: A comprehensive R package for deep mining microbiome
Xu, Shuangbin, Zhan, Li, Tang, Wenli, Wang, Qianwen, Dai, Zehan, Zhou, Lang, Feng, Tingze, Chen, Meijun, Wu, Tianzhi, Hu, Erqiang, Yu, Guangchuang
Published in Innovation (New York, NY) (13.03.2023)
Published in Innovation (New York, NY) (13.03.2023)
Get full text
Journal Article
Characterization of toxin-antitoxin systems from public sequencing data: A case study in Pseudomonas aeruginosa
Dai, Zehan, Wu, Tianzhi, Xu, Shuangbin, Zhou, Lang, Tang, Wenli, Hu, Erqian, Zhan, Li, Chen, Meijun, Yu, Guangchuang
Published in Frontiers in microbiology (16.08.2022)
Published in Frontiers in microbiology (16.08.2022)
Get full text
Journal Article
MMINP: A computational framework of microbe-metabolite interactions-based metabolic profiles predictor based on the O2-PLS algorithm
Tang, Wenli, Zheng, Huimin, Xu, Shuangbin, Li, Pan, Zhan, Li, Luo, Xiao, Dai, Zehan, Wang, Qianwen, Yu, Guangchuang
Published in Gut microbes (31.12.2023)
Published in Gut microbes (31.12.2023)
Get full text
Journal Article
Resolving tumor evolution: a phylogenetic approach
Li, Lin, Xie, Wenqin, Zhan, Li, Wen, Shaodi, Luo, Xiao, Xu, Shuangbin, Cai, Yantong, Tang, Wenli, Wang, Qianwen, Li, Ming, Xie, Zijing, Deng, Lin, Zhu, Hongyuan, Yu, Guangchuang
Published in Journal of the National Cancer Center (01.06.2024)
Published in Journal of the National Cancer Center (01.06.2024)
Get full text
Journal Article
Leveraging Fecal Bacterial Survey Data to Predict Colorectal Tumors
Zhang, Bangzhou, Xu, Shuangbin, Xu, Wei, Chen, Qiongyun, Chen, Zhangran, Yan, Changsheng, Fan, Yanyun, Zhang, Huangkai, Liu, Qi, Yang, Jie, Yang, Jinfeng, Xiao, Chuanxing, Xu, Hongzhi, Ren, Jianlin
Published in Frontiers in genetics (28.05.2019)
Published in Frontiers in genetics (28.05.2019)
Get full text
Journal Article
ggtreeExtra: Compact Visualization of Richly Annotated Phylogenetic Data
Xu, Shuangbin, Dai, Zehan, Guo, Pingfan, Fu, Xiaocong, Liu, Shanshan, Zhou, Lang, Tang, Wenli, Feng, Tingze, Chen, Meijun, Zhan, Li, Wu, Tianzhi, Hu, Erqiang, Jiang, Yong, Bo, Xiaochen, Yu, Guangchuang
Published in Molecular biology and evolution (01.09.2021)
Published in Molecular biology and evolution (01.09.2021)
Get full text
Journal Article
Gut microbiota and metabolite alterations associated with reduced bone mineral density or bone metabolic indexes in postmenopausal osteoporosis
He, Jianquan, Xu, Shuangbin, Zhang, Bangzhou, Xiao, Chuanxing, Chen, Zhangran, Si, Fuyou, Fu, Jifan, Lin, Xiaomei, Zheng, Guohua, Yu, Guangchuang, Chen, Jian
Published in Aging (Albany, NY.) (11.05.2020)
Published in Aging (Albany, NY.) (11.05.2020)
Get full text
Journal Article
Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data
Wang, Li-Gen, Lam, Tommy Tsan-Yuk, Xu, Shuangbin, Dai, Zehan, Zhou, Lang, Feng, Tingze, Guo, Pingfan, Dunn, Casey W, Jones, Bradley R, Bradley, Tyler, Zhu, Huachen, Guan, Yi, Jiang, Yong, Yu, Guangchuang
Published in Molecular biology and evolution (01.02.2020)
Published in Molecular biology and evolution (01.02.2020)
Get full text
Journal Article
Identification of a male-specific DNA marker in the large yellow croaker (Larimichthys crocea)
Lin, Aiqiang, Xiao, Shijun, Xu, Shuangbin, Ye, Kun, Lin, Xiaoyu, Sun, Sha, Wang, Zhiyong
Published in Aquaculture (01.11.2017)
Published in Aquaculture (01.11.2017)
Get full text
Journal Article
Using clusterProfiler to characterize multiomics data
Xu, Shuangbin, Hu, Erqiang, Cai, Yantong, Xie, Zijing, Luo, Xiao, Zhan, Li, Tang, Wenli, Wang, Qianwen, Liu, Bingdong, Wang, Rui, Xie, Wenqin, Wu, Tianzhi, Xie, Liwei, Yu, Guangchuang
Published in Nature protocols (17.07.2024)
Published in Nature protocols (17.07.2024)
Get full text
Journal Article
Preservation of the fecal samples at ambient temperature for microbiota analysis with a cost-effective and reliable stabilizer EffcGut
Yang, Luxi, Hou, Kaijian, Zhang, Bangzhou, Ouyang, Cong, Lin, Aiqiang, Xu, Shuangbin, Ke, Dongxian, Fang, Lujing, Chen, Qiongyun, Wu, Jingtong, Yan, Changsheng, Lian, Yifan, Jiang, Tao, He, Jianquan, Wang, Han, Fu, Yousi, Xiao, Chuanxing, Chen, Zhangran
Published in The Science of the total environment (01.11.2020)
Published in The Science of the total environment (01.11.2020)
Get full text
Journal Article
Impact of Left Atrial Sphericity Index on the Outcome of Catheter Ablation for Atrial Fibrillation
Shi, Jiaran, Xu, Shuangbin, Chen, Leiyang, Wu, Bifeng, Yang, Kun, Chen, Shi, Zhou, Dongchen, Zhang, Biqi, Xuan, Tianming, Hu, Xiaosheng
Published in Journal of cardiovascular translational research (01.10.2021)
Published in Journal of cardiovascular translational research (01.10.2021)
Get full text
Journal Article