Set2 histone methyltransferase regulates transcription coupled-nucleotide excision repair in yeast
Selvam, Kathiresan, Plummer, Dalton A, Mao, Peng, Wyrick, John J
Published in PLoS genetics (09.03.2022)
Published in PLoS genetics (09.03.2022)
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ETS transcription factors induce a unique UV damage signature that drives recurrent mutagenesis in melanoma
Mao, Peng, Brown, Alexander J, Esaki, Shingo, Lockwood, Svetlana, Poon, Gregory M K, Smerdon, Michael J, Roberts, Steven A, Wyrick, John J
Published in Nature communications (06.07.2018)
Published in Nature communications (06.07.2018)
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Journal Article
DNA Repair in Nucleosomes: Insights from Histone Modifications and Mutants
Selvam, Kathiresan, Wyrick, John J, Parra, Michael A
Published in International journal of molecular sciences (16.04.2024)
Published in International journal of molecular sciences (16.04.2024)
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Journal Article
Elf1 promotes transcription-coupled repair in yeast by using its C-terminal domain to bind TFIIH
Selvam, Kathiresan, Xu, Jun, Wilson, Hannah E, Oh, Juntaek, Li, Qingrong, Wang, Dong, Wyrick, John J
Published in Nature communications (23.07.2024)
Published in Nature communications (23.07.2024)
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Journal Article
R-loop formation by dCas9 is mutagenic in Saccharomyces cerevisiae
Laughery, Marian F, Mayes, Hannah C, Pedroza, Ivan K, Wyrick, John J
Published in Nucleic acids research (18.03.2019)
Published in Nucleic acids research (18.03.2019)
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Single-Molecule Imaging Reveals that Rad4 Employs a Dynamic DNA Damage Recognition Process
Kong, Muwen, Liu, Lili, Chen, Xuejing, Driscoll, Katherine I., Mao, Peng, Böhm, Stefanie, Kad, Neil M., Watkins, Simon C., Bernstein, Kara A., Wyrick, John J., Min, Jung-Hyun, Van Houten, Bennett
Published in Molecular cell (20.10.2016)
Published in Molecular cell (20.10.2016)
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Journal Article
Elongation factor ELOF1 drives transcription-coupled repair and prevents genome instability
Geijer, Marit E, Zhou, Di, Selvam, Kathiresan, Steurer, Barbara, Mukherjee, Chirantani, Evers, Bastiaan, Cugusi, Simona, van Toorn, Marvin, van der Woude, Melanie, Janssens, Roel C, Kok, Yannick P, Gong, Wenzhi, Raams, Anja, Lo, Calvin S Y, Lebbink, Joyce H G, Geverts, Bart, Plummer, Dalton A, Bezstarosti, Karel, Theil, Arjan F, Mitter, Richard, Houtsmuller, Adriaan B, Vermeulen, Wim, Demmers, Jeroen A A, Li, Shisheng, van Vugt, Marcel A T M, Lans, Hannes, Bernards, René, Svejstrup, Jesper Q, Ray Chaudhuri, Arnab, Wyrick, John J, Marteijn, Jurgen A
Published in Nature cell biology (01.06.2021)
Published in Nature cell biology (01.06.2021)
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Journal Article
Nucleosome positions establish an extended mutation signature in melanoma
Brown, Alexander J, Mao, Peng, Smerdon, Michael J, Wyrick, John J, Roberts, Steven A
Published in PLoS genetics (28.11.2018)
Published in PLoS genetics (28.11.2018)
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Contributions of replicative and translesion DNA polymerases to mutagenic bypass of canonical and atypical UV photoproducts
Vandenberg, Brittany N, Laughery, Marian F, Cordero, Cameron, Plummer, Dalton, Mitchell, Debra, Kreyenhagen, Jordan, Albaqshi, Fatimah, Brown, Alexander J, Mieczkowski, Piotr A, Wyrick, John J, Roberts, Steven A
Published in Nature communications (04.05.2023)
Published in Nature communications (04.05.2023)
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Journal Article
Nucleosomes Selectively Inhibit Cas9 Off-target Activity at a Site Located at the Nucleosome Edge
Hinz, John M., Laughery, Marian F., Wyrick, John J.
Published in The Journal of biological chemistry (25.11.2016)
Published in The Journal of biological chemistry (25.11.2016)
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Journal Article
Mutperiod: Analysis of periodic mutation rates in nucleosomes
Morledge-Hampton, Benjamin, Wyrick, John J.
Published in Computational and structural biotechnology journal (01.01.2021)
Published in Computational and structural biotechnology journal (01.01.2021)
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Journal Article
High-resolution mapping demonstrates inhibition of DNA excision repair by transcription factors
Duan, Mingrui, Sivapragasam, Smitha, Antony, Jacob S, Ulibarri, Jenna, Hinz, John M, Poon, Gregory M K, Wyrick, John J, Mao, Peng
Published in eLife (15.03.2022)
Published in eLife (15.03.2022)
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Journal Article
Tips, Tricks, and Potential Pitfalls of CRISPR Genome Editing in Saccharomyces cerevisiae
Antony, Jacob S, Hinz, John M, Wyrick, John J
Published in Frontiers in bioengineering and biotechnology (30.05.2022)
Published in Frontiers in bioengineering and biotechnology (30.05.2022)
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Journal Article
Molecular mechanism of UV damage modulation in nucleosomes
Stark, Bastian, Poon, Gregory M.K., Wyrick, John J.
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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Journal Article
Atypical UV Photoproducts Induce Non-canonical Mutation Classes Associated with Driver Mutations in Melanoma
Laughery, Marian F., Brown, Alexander J., Bohm, Kaitlynne A., Sivapragasam, Smitha, Morris, Haley S., Tchmola, Mila, Washington, Angelica D., Mitchell, Debra, Mather, Stephen, Malc, Ewa P., Mieczkowski, Piotr A., Roberts, Steven A., Wyrick, John J.
Published in Cell reports (Cambridge) (17.11.2020)
Published in Cell reports (Cambridge) (17.11.2020)
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