Genomic characterization of the uncultured Bacteroidales family S24-7 inhabiting the guts of homeothermic animals
Ormerod, Kate L, Wood, David L A, Lachner, Nancy, Gellatly, Shaan L, Daly, Joshua N, Parsons, Jeremy D, Dal'Molin, Cristiana G O, Palfreyman, Robin W, Nielsen, Lars K, Cooper, Matthew A, Morrison, Mark, Hansbro, Philip M, Hugenholtz, Philip
Published in Microbiome (07.07.2016)
Published in Microbiome (07.07.2016)
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Journal Article
Recommendations for Accurate Resolution of Gene and Isoform Allele-Specific Expression in RNA-Seq Data
Wood, David L A, Nones, Katia, Steptoe, Anita, Christ, Angelika, Harliwong, Ivon, Newell, Felicity, Bruxner, Timothy J C, Miller, David, Cloonan, Nicole, Grimmond, Sean M
Published in PloS one (12.05.2015)
Published in PloS one (12.05.2015)
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Journal Article
Disease-associated gut microbiome and metabolome changes in patients with chronic obstructive pulmonary disease
Bowerman, Kate L., Rehman, Saima Firdous, Vaughan, Annalicia, Lachner, Nancy, Budden, Kurtis F., Kim, Richard Y., Wood, David L. A., Gellatly, Shaan L., Shukla, Shakti D., Wood, Lisa G., Yang, Ian A., Wark, Peter A., Hugenholtz, Philip, Hansbro, Philip M.
Published in Nature communications (18.11.2020)
Published in Nature communications (18.11.2020)
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Journal Article
ArachnoServer: a database of protein toxins from spiders
Wood, David L A, Miljenović, Tomas, Cai, Shuzhi, Raven, Robert J, Kaas, Quentin, Escoubas, Pierre, Herzig, Volker, Wilson, David, King, Glenn F
Published in BMC genomics (13.08.2009)
Published in BMC genomics (13.08.2009)
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Journal Article
Evaluation of the Microba Community Profiler for Taxonomic Profiling of Metagenomic Datasets From the Human Gut Microbiome
Parks, Donovan H, Rigato, Fabio, Vera-Wolf, Patricia, Krause, Lutz, Hugenholtz, Philip, Tyson, Gene W, Wood, David L A
Published in Frontiers in microbiology (20.04.2021)
Published in Frontiers in microbiology (20.04.2021)
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Journal Article
X-MATE: a flexible system for mapping short read data
WOOD, David L. A, QINYING XU, PEARSON, John V, CLOONAN, Nicole, GRIMMOND, Sean M
Published in Bioinformatics (Oxford, England) (15.02.2011)
Published in Bioinformatics (Oxford, England) (15.02.2011)
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Journal Article
Probiotic Bifidobacterium longum subsp. longum Protects against Cigarette Smoke-Induced Inflammation in Mice
Budden, Kurtis F, Gellatly, Shaan L, Vaughan, Annalicia, Amorim, Nadia, Horvat, Jay C, Hansbro, Nicole G, Wood, David L A, Hugenholtz, Philip, Dennis, Paul G, Wark, Peter A B, Hansbro, Philip M
Published in International journal of molecular sciences (23.12.2022)
Published in International journal of molecular sciences (23.12.2022)
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Journal Article
Microbiomes in respiratory health and disease: An Asia‐Pacific perspective
Chotirmall, Sanjay H., Gellatly, Shaan L., Budden, Kurtis F., Mac Aogáin, Micheál, Shukla, Shakti D., Wood, David L.A., Hugenholtz, Philip, Pethe, Kevin, Hansbro, Philip M.
Published in Respirology (Carlton, Vic.) (01.02.2017)
Published in Respirology (Carlton, Vic.) (01.02.2017)
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Journal Article
A Natural History of Actinic Keratosis and Cutaneous Squamous Cell Carcinoma Microbiomes
Wood, David L A, Lachner, Nancy, Tan, Jean-Marie, Tang, Stephanie, Angel, Nicola, Laino, Antonia, Linedale, Richard, Lê Cao, Kim-Anh, Morrison, Mark, Frazer, Ian H, Soyer, H Peter, Hugenholtz, Philip
Published in mBio (09.10.2018)
Published in mBio (09.10.2018)
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Journal Article
Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
Zhou, Joyce, Boyd, Joel A, Nyeverecz, Bozica, Vivian, Charlotte, Angel, Nicola, Wood, David L A, Hugenholtz, Philip, Tyson, Gene W, Krause, Lutz, Ã Cuív, Páraic
Published in BMC research notes (17.08.2023)
Published in BMC research notes (17.08.2023)
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Journal Article
ArachnoServer 2.0, an updated online resource for spider toxin sequences and structures
Herzig, Volker, Wood, David L.A, Newell, Felicity, Chaumeil, Pierre-Alain, Kaas, Quentin, Binford, Greta J, Nicholson, Graham M, Gorse, Dominique, King, Glenn F
Published in Nucleic acids research (01.01.2011)
Published in Nucleic acids research (01.01.2011)
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Journal Article
Critical evaluation of faecal microbiome preservation using metagenomic analysis
Pribyl, Alena L, Parks, Donovan H, Angel, Nicola Z, Boyd, Joel A, Hasson, Alexander G, Fang, Liang, MacDonald, Samantha L, Wills, Blake A, Wood, David L A, Krause, Lutz, Tyson, Gene W, Hugenholtz, Philip
Published in ISME Communications (05.05.2021)
Published in ISME Communications (05.05.2021)
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Journal Article
Autism-related dietary preferences mediate autism-gut microbiome associations
Yap, Chloe X., Henders, Anjali K., Alvares, Gail A., Wood, David L.A., Krause, Lutz, Tyson, Gene W., Restuadi, Restuadi, Wallace, Leanne, McLaren, Tiana, Hansell, Narelle K., Cleary, Dominique, Grove, Rachel, Hafekost, Claire, Harun, Alexis, Holdsworth, Helen, Jellett, Rachel, Khan, Feroza, Lawson, Lauren P., Leslie, Jodie, Frenk, Mira Levis, Masi, Anne, Mathew, Nisha E., Muniandy, Melanie, Nothard, Michaela, Miller, Jessica L., Nunn, Lorelle, Holtmann, Gerald, Strike, Lachlan T., de Zubicaray, Greig I., Thompson, Paul M., McMahon, Katie L., Wright, Margaret J., Visscher, Peter M., Dawson, Paul A., Dissanayake, Cheryl, Eapen, Valsamma, Heussler, Helen S., McRae, Allan F., Whitehouse, Andrew J.O., Wray, Naomi R., Gratten, Jacob
Published in Cell (24.11.2021)
Published in Cell (24.11.2021)
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Journal Article
Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells
Kolle, Gabriel, Shepherd, Jill L, Gardiner, Brooke, Kassahn, Karin S, Cloonan, Nicole, Wood, David L A, Nourbakhsh, Ehsan, Taylor, Darrin F, Wani, Shivangi, Chy, Hun S, Zhou, Qi, McKernan, Kevin, Kuersten, Scott, Laslett, Andrew L, Grimmond, Sean M
Published in Genome research (01.12.2011)
Published in Genome research (01.12.2011)
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Journal Article
Genome-wide characterization of the routes to pluripotency
Hussein, Samer M. I., Puri, Mira C., Tonge, Peter D., Benevento, Marco, Corso, Andrew J., Clancy, Jennifer L., Mosbergen, Rowland, Li, Mira, Lee, Dong-Sung, Cloonan, Nicole, Wood, David L. A., Munoz, Javier, Middleton, Robert, Korn, Othmar, Patel, Hardip R., White, Carl A., Shin, Jong-Yeon, Gauthier, Maely E., Cao, Kim-Anh Lê, Kim, Jong-Il, Mar, Jessica C., Shakiba, Nika, Ritchie, William, Rasko, John E. J., Grimmond, Sean M., Zandstra, Peter W., Wells, Christine A., Preiss, Thomas, Seo, Jeong-Sun, Heck, Albert J. R., Rogers, Ian M., Nagy, Andras
Published in Nature (London) (11.12.2014)
Published in Nature (London) (11.12.2014)
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Journal Article
Autism-related dietary preferences mediate autism-gut microbiome associations
Yap, Chloe X., Henders, Anjali K., Alvares, Gail A., Wood, David L.A., Krause, Lutz, Tyson, Gene W., Restuadi, Restuadi, Wallace, Leanne, McLaren, Tiana, Hansell, Narelle K., Cleary, Dominique, Grove, Rachel, Hafekost, Claire, Harun, Alexis, Holdsworth, Helen, Jellett, Rachel, Khan, Feroza, Lawson, Lauren P., Leslie, Jodie, Frenk, Mira Levis, Masi, Anne, Mathew, Nisha E., Muniandy, Melanie, Nothard, Michaela, Miller, Jessica L., Nunn, Lorelle, Holtmann, Gerald, Strike, Lachlan T., de Zubicaray, Greig I., Thompson, Paul M., McMahon, Katie L., Wright, Margaret J., Visscher, Peter M., Dawson, Paul A., Dissanayake, Cheryl, Eapen, Valsamma, Heussler, Helen S., McRae, Allan F., Whitehouse, Andrew J.O., Wray, Naomi R., Gratten, Jacob
Published in Cell (18.01.2024)
Published in Cell (18.01.2024)
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Journal Article
Characteristics of the gastrointestinal microbiota following prebiotic supplementation in acute kidney transplant recipients: Results from a randomised controlled trial
Chan, Samuel, Wood, David LA, Hawley, Carmel M., Campbell, Katrina L., Campbell, Scott B., Cao, Christopher, Francis, Ross S., Hale, Rachael, Isbel, Nicole M., Pascoe, Elaine M., Johnson, David W., Morrison, Mark
Published in Clinical transplantation (01.01.2024)
Published in Clinical transplantation (01.01.2024)
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Journal Article
RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks
An, Jiyuan, Lai, John, Wood, David L A, Sajjanhar, Atul, Wang, Chenwei, Tevz, Gregor, Lehman, Melanie L, Nelson, Colleen C
Published in BMC genomics (01.03.2015)
Published in BMC genomics (01.03.2015)
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