H3K4me3 Breadth Is Linked to Cell Identity and Transcriptional Consistency
Benayoun, Bérénice A., Pollina, Elizabeth A., Ucar, Duygu, Mahmoudi, Salah, Karra, Kalpana, Wong, Edith D., Devarajan, Keerthana, Daugherty, Aaron C., Kundaje, Anshul B., Mancini, Elena, Hitz, Benjamin C., Gupta, Rakhi, Rando, Thomas A., Baker, Julie C., Snyder, Michael P., Cherry, J. Michael, Brunet, Anne
Published in Cell (31.07.2014)
Published in Cell (31.07.2014)
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The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum
Bozdech, Zbynek, Llinás, Manuel, Pulliam, Brian Lee, Wong, Edith D, Zhu, Jingchun, DeRisi, Joseph L
Published in PLoS biology (01.10.2003)
Published in PLoS biology (01.10.2003)
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The Dynamin-Related GTPase, Mgm1p, Is an Intermembrane Space Protein Required for Maintenance of Fusion Competent Mitochondria
Wong, Edith D., Wagner, Jennifer A., Gorsich, Steven W., McCaffery, J. Michael, Shaw, Janet M., Nunnari, Jodi
Published in The Journal of cell biology (16.10.2000)
Published in The Journal of cell biology (16.10.2000)
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Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources
Wong, Edith D, Miyasato, Stuart R, Aleksander, Suzi, Karra, Kalpana, Nash, Robert S, Skrzypek, Marek S, Weng, Shuai, Engel, Stacia R, Cherry, J Michael
Published in Genetics (Austin) (04.05.2023)
Published in Genetics (Austin) (04.05.2023)
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Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes
Meldal, Birgit H M, Bye-A-Jee, Hema, Gajdoš, Lukáš, Hammerová, Zuzana, Horáčková, Aneta, Melicher, Filip, Perfetto, Livia, Pokorný, Daniel, Lopez, Milagros Rodriguez, Türková, Alžběta, Wong, Edith D, Xie, Zengyan, Casanova, Elisabeth Barrera, del-Toro, Noemi, Koch, Maximilian, Porras, Pablo, Hermjakob, Henning, Orchard, Sandra
Published in Nucleic acids research (08.01.2019)
Published in Nucleic acids research (08.01.2019)
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New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Engel, Stacia R, Wong, Edith D, Nash, Robert S, Aleksander, Suzi, Alexander, Micheal, Douglass, Eric, Karra, Kalpana, Miyasato, Stuart R, Simison, Matt, Skrzypek, Marek S, Weng, Shuai, Cherry, J Michael
Published in Genetics (Austin) (04.04.2022)
Published in Genetics (Austin) (04.04.2022)
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Alliance of Genome Resources Portal: unified model organism research platform
Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzi, Argasinska, Joanna, Arnaboldi, Valerio, Attrill, Helen, Bello, Susan M, Blake, Judith A, Blodgett, Olin, Bradford, Yvonne M, Bult, Carol J, Cain, Scott, Calvi, Brian R, Carbon, Seth, Chan, Juancarlos, Chen, Wen J, Cherry, J Michael, Cho, Jaehyoung, Christie, Karen R, Crosby, Madeline A, Pons, Jeff De, Dolan, Mary E, Santos, Gilberto dos, Dunn, Barbara, Dunn, Nathan, Eagle, Anne, Ebert, Dustin, Engel, Stacia R, Fashena, David, Frazer, Ken, Gao, Sibyl, Gondwe, Felix, Goodman, Josh, Gramates, L Sian, Grove, Christian A, Harris, Todd, Harrison, Marie-Claire, Howe, Douglas G, Howe, Kevin L, Jha, Sagar, Kadin, James A, Kaufman, Thomas C, Kalita, Patrick, Karra, Kalpana, Kishore, Ranjana, Laulederkind, Stan, Lee, Raymond, MacPherson, Kevin A, Marygold, Steven J, Matthews, Beverley, Millburn, Gillian, Miyasato, Stuart, Moxon, Sierra, Mueller, Hans-Michael, Mungall, Christopher, Muruganujan, Anushya, Mushayahama, Tremayne, Nash, Robert S, Ng, Patrick, Paulini, Michael, Perrimon, Norbert, Pich, Christian, Raciti, Daniela, Richardson, Joel E, Russell, Matthew, Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Shimoyama, Mary, Simison, Matt, Smith, Cynthia, Shaw, David R, Shrivatsav, Ajay, Skrzypek, Marek, Smith, Jennifer R, Sternberg, Paul W, Tabone, Christopher J, Thomas, Paul D, Thota, Jyothi, Toro, Sabrina, Tomczuk, Monika, Tutaj, Marek, Tutaj, Monika, Urbano, Jose-Maria, Auken, Kimberly Van, Slyke, Ceri E Van, Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wong, Edith D, Wright, Adam, Yook, Karen
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Saccharomyces Genome Database: the genomics resource of budding yeast
Cherry, J. Michael, Hong, Eurie L., Amundsen, Craig, Balakrishnan, Rama, Binkley, Gail, Chan, Esther T., Christie, Karen R., Costanzo, Maria C., Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hirschman, Jodi E., Hitz, Benjamin C., Karra, Kalpana, Krieger, Cynthia J., Miyasato, Stuart R., Nash, Rob S., Park, Julie, Skrzypek, Marek S., Simison, Matt, Weng, Shuai, Wong, Edith D.
Published in Nucleic acids research (01.01.2012)
Published in Nucleic acids research (01.01.2012)
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The reference genome sequence of Saccharomyces cerevisiae: then and now
Engel, Stacia R, Dietrich, Fred S, Fisk, Dianna G, Binkley, Gail, Balakrishnan, Rama, Costanzo, Maria C, Dwight, Selina S, Hitz, Benjamin C, Karra, Kalpana, Nash, Robert S, Weng, Shuai, Wong, Edith D, Lloyd, Paul, Skrzypek, Marek S, Miyasato, Stuart R, Simison, Matt, Cherry, J Michael
Published in G3 : genes - genomes - genetics (20.03.2014)
Published in G3 : genes - genomes - genetics (20.03.2014)
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The complex portal--an encyclopaedia of macromolecular complexes
Meldal, Birgit H M, Forner-Martinez, Oscar, Costanzo, Maria C, Dana, Jose, Demeter, Janos, Dumousseau, Marine, Dwight, Selina S, Gaulton, Anna, Licata, Luana, Melidoni, Anna N, Ricard-Blum, Sylvie, Roechert, Bernd, Skyzypek, Marek S, Tiwari, Manu, Velankar, Sameer, Wong, Edith D, Hermjakob, Henning, Orchard, Sandra
Published in Nucleic acids research (28.01.2015)
Published in Nucleic acids research (28.01.2015)
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Updates to the Alliance of Genome Resources central infrastructure
Aleksander, Suzanne A, Anagnostopoulos, Anna V, Antonazzo, Giulia, Arnaboldi, Valerio, Attrill, Helen, Becerra, Andrés, Bello, Susan M, Blodgett, Olin, Bradford, Yvonne M, Bult, Carol J, Cain, Scott, Calvi, Brian R, Carbon, Seth, Chan, Juancarlos, Chen, Wen J, Cherry, J Michael, Cho, Jaehyoung, Crosby, Madeline A, De Pons, Jeffrey L, D’Eustachio, Peter, Diamantakis, Stavros, Dolan, Mary E, dos Santos, Gilberto, Dyer, Sarah, Ebert, Dustin, Engel, Stacia R, Fashena, David, Fisher, Malcolm, Foley, Saoirse, Gibson, Adam C, Gollapally, Varun R, Gramates, L Sian, Grove, Christian A, Hale, Paul, Harris, Todd, Hayman, G Thomas, Hu, Yanhui, James-Zorn, Christina, Karimi, Kamran, Karra, Kalpana, Kishore, Ranjana, Kwitek, Anne E, Laulederkind, Stanley J F, Lee, Raymond, Longden, Ian, Luypaert, Manuel, Markarian, Nicholas, Marygold, Steven J, Matthews, Beverley, McAndrews, Monica S, Millburn, Gillian, Miyasato, Stuart, Motenko, Howie, Moxon, Sierra, Muller, Hans-Michael, Mungall, Christopher J, Muruganujan, Anushya, Mushayahama, Tremayne, Nash, Robert S, Nuin, Paulo, Paddock, Holly, Pells, Troy, Perrimon, Norbert, Pich, Christian, Quinton-Tulloch, Mark, Raciti, Daniela, Ramachandran, Sridhar, Richardson, Joel E, Gelbart, Susan Russo, Ruzicka, Leyla, Schindelman, Gary, Shaw, David R, Sherlock, Gavin, Shrivatsav, Ajay, Singer, Amy, Smith, Constance M, Smith, Cynthia L, Smith, Jennifer R, Stein, Lincoln, Sternberg, Paul W, Tabone, Christopher J, Thomas, Paul D, Thorat, Ketaki, Thota, Jyothi, Tomczuk, Monika, Trovisco, Vitor, Tutaj, Marek A, Urbano, Jose-Maria, Van Auken, Kimberly, Van Slyke, Ceri E, Vize, Peter D, Wang, Qinghua, Weng, Shuai, Westerfield, Monte, Wilming, Laurens G, Wong, Edith D, Wright, Adam, Yook, Karen, Zhou, Pinglei, Zorn, Aaron
Published in Genetics (Austin) (07.05.2024)
Published in Genetics (Austin) (07.05.2024)
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Transcriptome visualization and data availability at the Saccharomyces Genome Database
Ng, Patrick C, Wong, Edith D, MacPherson, Kevin A, Aleksander, Suzi, Argasinska, Joanna, Dunn, Barbara, Nash, Robert S, Skrzypek, Marek S, Gondwe, Felix, Jha, Sagar, Karra, Kalpana, Weng, Shuai, Miyasato, Stuart, Simison, Matt, Engel, Stacia R, Cherry, J Michael
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
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Saccharomyces genome database informs human biology
Skrzypek, Marek S, Nash, Robert S, Wong, Edith D, MacPherson, Kevin A, Hellerstedt, Sage T, Engel, Stacia R, Karra, Kalpana, Weng, Shuai, Sheppard, Travis K, Binkley, Gail, Simison, Matt, Miyasato, Stuart R, Cherry, J Michael
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
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Saccharomyces genome database provides new regulation data
Costanzo, Maria C, Engel, Stacia R, Wong, Edith D, Lloyd, Paul, Karra, Kalpana, Chan, Esther T, Weng, Shuai, Paskov, Kelley M, Roe, Greg R, Binkley, Gail, Hitz, Benjamin C, Cherry, J Michael
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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Comparative whole genome transcriptome analysis of three Plasmodium falciparum strains
Llinás, Manuel, Bozdech, Zbynek, Wong, Edith D., Adai, Alex T., DeRisi, Joseph L.
Published in Nucleic acids research (01.01.2006)
Published in Nucleic acids research (01.01.2006)
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H3K4me3 Breadth Is Linked to Cell Identity and Transcriptional Consistency
Benayoun, Bérénice A., Pollina, Elizabeth A., Ucar, Duygu, Mahmoudi, Salah, Karra, Kalpana, Wong, Edith D., Devarajan, Keerthana, Daugherty, Aaron C., Kundaje, Anshul B., Mancini, Elena, Hitz, Benjamin C., Gupta, Rakhi, Rando, Thomas A., Baker, Julie C., Snyder, Michael P., Cherry, J. Michael, Brunet, Anne
Published in Cell (19.11.2015)
Published in Cell (19.11.2015)
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The Saccharomyces Genome Database Variant Viewer
Sheppard, Travis K, Hitz, Benjamin C, Engel, Stacia R, Song, Giltae, Balakrishnan, Rama, Binkley, Gail, Costanzo, Maria C, Dalusag, Kyla S, Demeter, Janos, Hellerstedt, Sage T, Karra, Kalpana, Nash, Robert S, Paskov, Kelley M, Skrzypek, Marek S, Weng, Shuai, Wong, Edith D, Cherry, J Michael
Published in Nucleic acids research (04.01.2016)
Published in Nucleic acids research (04.01.2016)
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Gene Ontology annotations at SGD: new data sources and annotation methods
Hong, Eurie L, Balakrishnan, Rama, Dong, Qing, Christie, Karen R, Park, Julie, Binkley, Gail, Costanzo, Maria C, Dwight, Selina S, Engel, Stacia R, Fisk, Dianna G, Hirschman, Jodi E, Hitz, Benjamin C, Krieger, Cynthia J, Livstone, Michael S, Miyasato, Stuart R, Nash, Robert S, Oughtred, Rose, Skrzypek, Marek S, Weng, Shuai, Wong, Edith D, Zhu, Kathy K, Dolinski, Kara, Botstein, David, Cherry, J. Michael
Published in Nucleic acids research (01.01.2008)
Published in Nucleic acids research (01.01.2008)
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