Vaginal microbiota in ethnically diverse young women who did or did not develop pelvic inflammatory disease: community-based prospective study
Kerry-Barnard, Sarah, Zhou, Liqing, Phillips, Laura, Furegato, Martina, Witney, Adam A, Sadiq, S Tariq, Oakeshott, Pippa
Published in Sexually transmitted infections (01.11.2022)
Published in Sexually transmitted infections (01.11.2022)
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Journal Article
Clinical use of whole genome sequencing for Mycobacterium tuberculosis
Witney, Adam A, Cosgrove, Catherine A, Arnold, Amber, Hinds, Jason, Stoker, Neil G, Butcher, Philip D
Published in BMC medicine (23.03.2016)
Published in BMC medicine (23.03.2016)
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Journal Article
Transcriptional analysis of temporal gene expression in germinating Clostridium difficile 630 endospores
Dembek, Marcin, Stabler, Richard A, Witney, Adam A, Wren, Brendan W, Fairweather, Neil F
Published in PloS one (15.05.2013)
Published in PloS one (15.05.2013)
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Journal Article
Emergence of phenotypic and genotypic antimicrobial resistance in Mycobacterium tuberculosis
Kloprogge, Frank, Ortiz Canseco, Julio, Phee, Lynette, Sadouki, Zahra, Kipper, Karin, Witney, Adam A., Stoker, Neil, McHugh, Timothy D.
Published in Scientific reports (11.12.2022)
Published in Scientific reports (11.12.2022)
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Journal Article
Identification of small RNAs associated with RNA chaperone Hfq reveals a new stress response regulator in Actinobacillus pleuropneumoniae
da Silva, Giarlã Cunha, Rossi, Ciro César, Rosa, Jéssica Nogueira, Sanches, Newton Moreno, Cardoso, Daniela Lopes, Li, Yanwen, Witney, Adam A, Gould, Kate A, Fontes, Patrícia Pereira, Callaghan, Anastasia J, Bossé, Janine Thérèse, Langford, Paul Richard, Bazzolli, Denise Mara Soares
Published in Frontiers in microbiology (04.10.2022)
Published in Frontiers in microbiology (04.10.2022)
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Journal Article
Use of whole-genome sequencing to distinguish relapse from reinfection in a completed tuberculosis clinical trial
Witney, Adam A, Bateson, Anna L E, Jindani, Amina, Phillips, Patrick P J, Coleman, David, Stoker, Neil G, Butcher, Philip D, McHugh, Timothy D
Published in BMC medicine (29.03.2017)
Published in BMC medicine (29.03.2017)
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Journal Article
Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study
Stirrup, Oliver, Blackstone, James, Mapp, Fiona, MacNeil, Alyson, Panca, Monica, Holmes, Alison, Machin, Nicholas, Shin, Gee Yen, Mahungu, Tabitha, Saeed, Kordo, Saluja, Tranprit, Taha, Yusri, Mahida, Nikunj, Pope, Cassie, Chawla, Anu, Cutino-Moguel, Maria-Teresa, Tamuri, Asif, Williams, Rachel, Darby, Alistair, Robertson, David L, Flaviani, Flavia, Nastouli, Eleni, Robson, Samuel, Smith, Darren, Loose, Matthew, Laing, Kenneth, Monahan, Irene, Kele, Beatrix, Haldenby, Sam, George, Ryan, Bashton, Matthew, Witney, Adam A, Byott, Matthew, Coll, Francesc, Chapman, Michael, Peacock, Sharon J, Hughes, Joseph, Nebbia, Gaia, Partridge, David G, Parker, Matthew, Price, James Richard, Peters, Christine, Roy, Sunando, Snell, Luke B, de Silva, Thushan I, Thomson, Emma, Flowers, Paul, Copas, Andrew, Breuer, Judith
Published in eLife (13.09.2022)
Published in eLife (13.09.2022)
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Journal Article
Microarrays Reveal that Each of the Ten Dominant Lineages of Staphylococcus aureus Has a Unique Combination of Surface-Associated and Regulatory Genes
Lindsay, Jodi A, Moore, Catrin E, Day, Nicholas P, Peacock, Sharon J, Witney, Adam A, Stabler, Richard A, Husain, Sarah E, Butcher, Philip D, Hinds, Jason
Published in Journal of Bacteriology (01.01.2006)
Published in Journal of Bacteriology (01.01.2006)
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Journal Article
A proteomic view of the Plasmodium falciparum life cycle
Yates, John R, Florens, Laurence, Washburn, Michael P, Raine, J. Dale, Anthony, Robert M, Grainger, Munira, Haynes, J. David, Moch, J. Kathleen, Muster, Nemone, Sacci, John B, Tabb, David L, Witney, Adam A, Wolters, Dirk, Wu, Yimin, Gardner, Malcolm J, Holder, Anthony A, Sinden, Robert E, Carucci, Daniel J
Published in Nature (London) (03.10.2002)
Published in Nature (London) (03.10.2002)
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Journal Article
Baseline and acquired resistance to bedaquiline, linezolid and pretomanid, and impact on treatment outcomes in four tuberculosis clinical trials containing pretomanid
Timm, Juliano, Bateson, Anna, Solanki, Priya, Paleckyte, Ana, Witney, Adam A., Rofael, Sylvia A. D., Fabiane, Stella, Olugbosi, Morounfolu, McHugh, Timothy D., Sun, Eugene
Published in PLOS global public health (18.10.2023)
Published in PLOS global public health (18.10.2023)
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Journal Article
Identification of Streptococcus suis Meningitis through Population-Based Surveillance, Togo, 2010-2014
Tall, Haoua, Njanpop-Lafourcade, Berthe-Marie, Mounkoro, Didier, Tidjani, Loukoumane, Agbenoko, Kodjo, Alassani, Issifou, Amidou, Moussa, Tamekloe, Stanislas, Laing, Kenneth G, Witney, Adam A, Hinds, Jason, van der Linden, Mark P G, Gessner, Bradford D, Moïsi, Jennifer C
Published in Emerging infectious diseases (01.07.2016)
Published in Emerging infectious diseases (01.07.2016)
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Journal Article
Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source
Champion, O.L, Gaunt, M.W, Gundogdu, O, Elmi, A, Witney, A.A, Hinds, J, Dorrell, N, Wren, B.W
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2005)
Published in Proceedings of the National Academy of Sciences - PNAS (01.11.2005)
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Journal Article
Antibiotic Susceptibility, Virulome, and Clinical Outcomes in European Infants with Bloodstream Infections Caused by Enterobacterales
Folgori, Laura, Di Carlo, Domenico, Comandatore, Francesco, Piazza, Aurora, Witney, Adam A., Bresesti, Ilia, Hsia, Yingfen, Laing, Kenneth, Monahan, Irene, Bielicki, Julia, Alvaro, Alessandro, Zuccotti, Gian Vincenzo, Planche, Tim, Heath, Paul T., Sharland, Mike
Published in Antibiotics (Basel) (11.06.2021)
Published in Antibiotics (Basel) (11.06.2021)
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Identification of Plasmodium falciparum Antigens by Antigenic Analysis of Genomic and Proteomic Data
Doolan, Denise L., Southwood, Scott, Freilich, Daniel A., Sidney, John, Graber, Norma L., Shatney, Lori, Bebris, Lolita, Florens, Laurence, Dobano, Carlota, Witney, Adam A., Appella, Ettore, Hoffman, Stephen L., Yates, John R., Carucci, Daniel J., Sette, Alessandro
Published in Proceedings of the National Academy of Sciences - PNAS (19.08.2003)
Published in Proceedings of the National Academy of Sciences - PNAS (19.08.2003)
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Journal Article
Application of Comparative Phylogenomics To Study the Evolution of Yersinia enterocolitica and To Identify Genetic Differences Relating to Pathogenicity
HOWARD, Sarah L, GAUNT, Michael W, HINDS, Jason, WITNEY, Adam A, STABLER, Richard, WREN, Brendan W
Published in Journal of Bacteriology (01.05.2006)
Published in Journal of Bacteriology (01.05.2006)
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Journal Article
Genetic variation in spatio-temporal confined USA300 community-associated MRSA isolates: a shift from clonal dispersion to genetic evolution?
Carpaij, Neeltje, Willems, Rob J L, Rice, Thomas W, Weinstein, Robert A, Hinds, Jason, Witney, Adam A, Lindsay, Jodi A, Bonten, Marc J M, Fluit, Ad C
Published in PloS one (04.02.2011)
Published in PloS one (04.02.2011)
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Journal Article
Mycobacterium tuberculosis Is Resistant to Isoniazid at a Slow Growth Rate by Single Nucleotide Polymorphisms in katG Codon Ser315
Jeeves, Rose E, Marriott, Alice A N, Pullan, Steven T, Hatch, Kim A, Allnutt, Jon C, Freire-Martin, Irene, Hendon-Dunn, Charlotte L, Watson, Robert, Witney, Adam A, Tyler, Richard H, Arnold, Catherine, Marsh, Philip D, McHugh, Timothy D, Bacon, Joanna
Published in PloS one (2015)
Published in PloS one (2015)
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