Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data
Chen, Bin, Dong, Xiao, Jiao, Dazhi, Wang, Huijun, Zhu, Qian, Ding, Ying, Wild, David J
Published in BMC bioinformatics (17.05.2010)
Published in BMC bioinformatics (17.05.2010)
Get full text
Journal Article
Bayesian correlated clustering to integrate multiple datasets
KIRK, Paul, GRIFIFIN, Jim E, SAVAGE, Richard S, GHAHRAMANI, Zoubin, WILD, David L
Published in Bioinformatics (01.12.2012)
Published in Bioinformatics (01.12.2012)
Get full text
Journal Article
High-Resolution Temporal Profiling of Transcripts during Arabidopsis Leaf Senescence Reveals a Distinct Chronology of Processes and Regulation
Breeze, Emily, Harrison, Elizabeth, McHattie, Stuart, Hughes, Linda, Hickman, Richard, Hill, Claire, Kiddle, Steven, Kim, Youn-sung, Penfold, Christopher A., Jenkins, Dafyd, Zhang, Cunjin, Morris, Karl, Jenner, Carol, Jackson, Stephen, Thomas, Brian, Tabrett, Alexandra, Legaie, Roxane, Moore, Jonathan D., Wild, David L., Ott, Sascha, Rand, David, Beynon, Jim, Denby, Katherine, Mead, Andrew, Buchanan-Wollaston, Vicky
Published in The Plant cell (01.03.2011)
Published in The Plant cell (01.03.2011)
Get full text
Journal Article
Finding complex biological relationships in recent PubMed articles using Bio-LDA
Wang, Huijun, Ding, Ying, Tang, Jie, Dong, Xiao, He, Bing, Qiu, Judy, Wild, David J
Published in PloS one (23.03.2011)
Published in PloS one (23.03.2011)
Get full text
Journal Article
Arabidopsis Defense against Botrytis cinerea: Chronology and Regulation Deciphered by High-Resolution Temporal Transcriptomic Analysis
Windram, Oliver, Madhou, Priyadharshini, McHattie, Stuart, Hill, Claire, Hickman, Richard, Cooke, Emma, Jenkins, Dafyd J., Penfold, Christopher A., Baxter, Laura, Breeze, Emily, Kiddle, Steven J., Rhodes, Johanna, Atwell, Susanna, Kliebenstein, Daniel J., Kim, Youn-sung, Stegle, Oliver, Borgwardt, Karsten, Zhang, Cunjin, Tabrett, Alex, Legaie, Roxane, Moore, Jonathan, Finkenstadt, Bärbel, Wild, David L., Mead, Andrew, Rand, David, Beynon, Jim, Ott, Sascha, Buchanan-Wollaston, Vicky, Denby, Katherine J.
Published in The Plant cell (01.09.2012)
Published in The Plant cell (01.09.2012)
Get full text
Journal Article
Exploring the Energy Landscapes of Protein Folding Simulations with Bayesian Computation
Burkoff, Nikolas S., Várnai, Csilla, Wells, Stephen A., Wild, David L.
Published in Biophysical journal (22.02.2012)
Published in Biophysical journal (22.02.2012)
Get full text
Journal Article
A local regulatory network around three NAC transcription factors in stress responses and senescence in Arabidopsis leaves
Hickman, Richard, Hill, Claire, Penfold, Christopher A., Breeze, Emily, Bowden, Laura, Moore, Jonathan D., Zhang, Peijun, Jackson, Alison, Cooke, Emma, Bewicke‐Copley, Findlay, Mead, Andrew, Beynon, Jim, Wild, David L., Denby, Katherine J., Ott, Sascha, Buchanan‐Wollaston, Vicky
Published in The Plant journal : for cell and molecular biology (01.07.2013)
Published in The Plant journal : for cell and molecular biology (01.07.2013)
Get full text
Journal Article
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery
Gao, Zheng, Fu, Gang, Ouyang, Chunping, Tsutsui, Satoshi, Liu, Xiaozhong, Yang, Jeremy, Gessner, Christopher, Foote, Brian, Wild, David, Ding, Ying, Yu, Qi
Published in BMC bioinformatics (10.06.2019)
Published in BMC bioinformatics (10.06.2019)
Get full text
Journal Article
Transcriptional Dynamics Driving MAMP-Triggered Immunity and Pathogen Effector-Mediated Immunosuppression in Arabidopsis Leaves Following Infection with Pseudomonas syringae pv tomato DC3000
Lewis, Laura A., Polanski, Krzysztof, de Torres-Zabala, Marta, Jayaraman, Siddharth, Bowden, Laura, Moore, Jonathan, Penfold, Christopher A., Jenkins, Dafyd J., Hill, Claire, Baxter, Laura, Kulasekaran, Satish, Truman, William, Littlejohn, George, Prusinska, Justyna, Mead, Andrew, Steinbrenner, Jens, Hickman, Richard, Rand, David, Wild, David L., Ott, Sascha, Buchanan-Wollaston, Vicky, Smirnoff, Nick, Beynon, Jim, Denby, Katherine, Grant, Murray
Published in The Plant cell (01.11.2015)
Published in The Plant cell (01.11.2015)
Get full text
Journal Article
Bayesian hierarchical clustering for microarray time series data with replicates and outlier measurements
Cooke, Emma J, Savage, Richard S, Kirk, Paul D W, Darkins, Robert, Wild, David L
Published in BMC bioinformatics (13.10.2011)
Published in BMC bioinformatics (13.10.2011)
Get full text
Journal Article
The ChEMBL database as linked open data
Willighagen, Egon L, Waagmeester, Andra, Spjuth, Ola, Ansell, Peter, Williams, Antony J, Tkachenko, Valery, Hastings, Janna, Chen, Bin, Wild, David J
Published in Journal of cheminformatics (08.05.2013)
Published in Journal of cheminformatics (08.05.2013)
Get full text
Journal Article
Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination
Yang, Jeremy J, Gessner, Christopher R, Duerksen, Joel L, Biber, Daniel, Binder, Jessica L, Ozturk, Murat, Foote, Brian, McEntire, Robin, Stirling, Kyle, Ding, Ying, Wild, David J
Published in BMC bioinformatics (12.01.2022)
Published in BMC bioinformatics (12.01.2022)
Get full text
Journal Article