Better synonyms for enriching biomedical search
Yeganova, Lana, Kim, Sun, Chen, Qingyu, Balasanov, Grigory, Wilbur, W John, Lu, Zhiyong
Published in Journal of the American Medical Informatics Association : JAMIA (09.12.2020)
Published in Journal of the American Medical Informatics Association : JAMIA (09.12.2020)
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Journal Article
Database resources of the National Center for Biotechnology Information
Acland, Abigail, Agarwala, Richa, Barrett, Tanya, Beck, Jeff, Benson, Dennis A., Bollin, Colleen, Bolton, Evan, Bryant, Stephen H., Canese, Kathi, Church, Deanna M., Clark, Karen, DiCuccio, Michael, Dondoshansky, Ilya, Federhen, Scott, Feolo, Michael, Geer, Lewis Y., Gorelenkov, Viatcheslav, Hoeppner, Marilu, Johnson, Mark, Kelly, Christopher, Khotomlianski, Viatcheslav, Kimchi, Avi, Kimelman, Michael, Kitts, Paul, Krasnov, Sergey, Kuznetsov, Anatoliy, Landsman, David, Lipman, David J., Lu, Zhiyong, Madden, Thomas L., Madej, Tom, Maglott, Donna R., Marchler-Bauer, Aron, Karsch-Mizrachi, Ilene, Murphy, Terence, Ostell, James, O'Sullivan, Christopher, Panchenko, Anna, Phan, Lon, Pruitt, Don Preussm Kim D., Rubinstein, Wendy, Sayers, Eric W., Schneider, Valerie, Schuler, Gregory D., Sequeira, Edwin, Sherry, Stephen T., Shumway, Martin, Sirotkin, Karl, Siyan, Karanjit, Slotta, Douglas, Soboleva, Alexandra, Soussov, Vladimir, Starchenko, Grigory, Tatusova, Tatiana A., Trawick, Bart W., Vakatov, Denis, Wang, Yanli, Ward, Minghong, John Wilbur, W., Yaschenko, Eugene, Zbicz, Kerry
Published in Nucleic acids research (01.01.2014)
Published in Nucleic acids research (01.01.2014)
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Journal Article
Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical records
Chen, Qingyu, Du, Jingcheng, Kim, Sun, Wilbur, W John, Lu, Zhiyong
Published in BMC medical informatics and decision making (30.04.2020)
Published in BMC medical informatics and decision making (30.04.2020)
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Journal Article
Abbreviation definition identification based on automatic precision estimates
Sohn, Sunghwan, Comeau, Donald C, Kim, Won, Wilbur, W John
Published in BMC bioinformatics (25.09.2008)
Published in BMC bioinformatics (25.09.2008)
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Journal Article
Discovering themes in biomedical literature using a projection-based algorithm
Yeganova, Lana, Kim, Sun, Balasanov, Grigory, Wilbur, W John
Published in BMC bioinformatics (16.07.2018)
Published in BMC bioinformatics (16.07.2018)
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Journal Article
Overview of BioCreative II gene mention recognition
Smith, Larry, Tanabe, Lorraine K, Ando, Rie Johnson nee, Kuo, Cheng-Ju, Chung, I-Fang, Hsu, Chun-Nan, Lin, Yu-Shi, Klinger, Roman, Friedrich, Christoph M, Ganchev, Kuzman, Torii, Manabu, Liu, Hongfang, Haddow, Barry, Struble, Craig A, Povinelli, Richard J, Vlachos, Andreas, Baumgartner, Jr, William A, Hunter, Lawrence, Carpenter, Bob, Tsai, Richard Tzong-Han, Dai, Hong-Jie, Liu, Feng, Chen, Yifei, Sun, Chengjie, Katrenko, Sophia, Adriaans, Pieter, Blaschke, Christian, Torres, Rafael, Neves, Mariana, Nakov, Preslav, Divoli, Anna, Maña-López, Manuel, Mata, Jacinto, Wilbur, W John
Published in Genome biology (01.01.2008)
Published in Genome biology (01.01.2008)
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Journal Article
GENETAG: a tagged corpus for gene/protein named entity recognition
Tanabe, Lorraine, Xie, Natalie, Thom, Lynne H, Matten, Wayne, Wilbur, W John
Published in BMC bioinformatics (24.05.2005)
Published in BMC bioinformatics (24.05.2005)
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Journal Article
How to get the most out of your curation effort
Rzhetsky, Andrey, Shatkay, Hagit, Wilbur, W John
Published in PLoS computational biology (01.05.2009)
Published in PLoS computational biology (01.05.2009)
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Journal Article
Extracting drug–drug interactions from literature using a rich feature-based linear kernel approach
Kim, Sun, Liu, Haibin, Yeganova, Lana, Wilbur, W. John
Published in Journal of biomedical informatics (01.06.2015)
Published in Journal of biomedical informatics (01.06.2015)
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Journal Article
Evolving use of ancestry, ethnicity, and race in genetics research-A survey spanning seven decades
Byeon, Yen Ji Julia, Islamaj, Rezarta, Yeganova, Lana, Wilbur, W John, Lu, Zhiyong, Brody, Lawrence C, Bonham, Vence L
Published in American journal of human genetics (02.12.2021)
Published in American journal of human genetics (02.12.2021)
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Journal Article
Finding biomedical categories in Medline
Yeganova, Lana, Kim, Won, Comeau, Donald C, Wilbur, W John
Published in Journal of biomedical semantics (05.10.2012)
Published in Journal of biomedical semantics (05.10.2012)
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Journal Article
MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval
Jin, Qiao, Kim, Won, Chen, Qingyu, Comeau, Donald C, Yeganova, Lana, Wilbur, W John, Lu, Zhiyong
Published in Bioinformatics (Oxford, England) (01.11.2023)
Published in Bioinformatics (Oxford, England) (01.11.2023)
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Journal Article
LitSense: making sense of biomedical literature at sentence level
Allot, Alexis, Chen, Qingyu, Kim, Sun, Vera Alvarez, Roberto, Comeau, Donald C, Wilbur, W John, Lu, Zhiyong
Published in Nucleic acids research (02.07.2019)
Published in Nucleic acids research (02.07.2019)
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Journal Article