A chromosome conformation capture ordered sequence of the barley genome
Mascher, Martin, Gundlach, Heidrun, Himmelbach, Axel, Beier, Sebastian, Twardziok, Sven O., Wicker, Thomas, Radchuk, Volodymyr, Dockter, Christoph, Hedley, Pete E., Russell, Joanne, Bayer, Micha, Ramsay, Luke, Liu, Hui, Haberer, Georg, Zhang, Xiao-Qi, Zhang, Qisen, Barrero, Roberto A., Li, Lin, Taudien, Stefan, Groth, Marco, Felder, Marius, Hastie, Alex, Šimková, Hana, Staňková, Helena, Vrána, Jan, Chan, Saki, Muñoz-Amatriaín, María, Ounit, Rachid, Wanamaker, Steve, Bolser, Daniel, Colmsee, Christian, Schmutzer, Thomas, Aliyeva-Schnorr, Lala, Grasso, Stefano, Tanskanen, Jaakko, Chailyan, Anna, Sampath, Dharanya, Heavens, Darren, Clissold, Leah, Cao, Sujie, Chapman, Brett, Dai, Fei, Han, Yong, Li, Hua, Li, Xuan, Lin, Chongyun, McCooke, John K., Tan, Cong, Wang, Penghao, Wang, Songbo, Yin, Shuya, Zhou, Gaofeng, Poland, Jesse A., Bellgard, Matthew I., Borisjuk, Ljudmilla, Houben, Andreas, Doležel, Jaroslav, Ayling, Sarah, Lonardi, Stefano, Kersey, Paul, Langridge, Peter, Muehlbauer, Gary J., Clark, Matthew D., Caccamo, Mario, Schulman, Alan H., Mayer, Klaus F. X., Platzer, Matthias, Close, Timothy J., Scholz, Uwe, Hansson, Mats, Zhang, Guoping, Braumann, Ilka, Spannagl, Manuel, Li, Chengdao, Waugh, Robbie, Stein, Nils
Published in Nature (London) (26.04.2017)
Published in Nature (London) (26.04.2017)
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Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly
Thind, Anupriya Kaur, Wicker, Thomas, Šimková, Hana, Fossati, Dario, Moullet, Odile, Brabant, Cécile, Vrána, Jan, Doležel, Jaroslav, Krattinger, Simon G
Published in Nature biotechnology (01.08.2017)
Published in Nature biotechnology (01.08.2017)
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Long-read sequence assembly: a technical evaluation in barley
Mascher, Martin, Wicker, Thomas, Jenkins, Jerry, Plott, Christopher, Lux, Thomas, Koh, Chu Shin, Ens, Jennifer, Gundlach, Heidrun, Boston, Lori B, Tulpová, Zuzana, Holden, Samuel, Hernández-Pinzón, Inmaculada, Scholz, Uwe, Mayer, Klaus F X, Spannagl, Manuel, Pozniak, Curtis J, Sharpe, Andrew G, Šimková, Hana, Moscou, Matthew J, Grimwood, Jane, Schmutz, Jeremy, Stein, Nils
Published in The Plant cell (19.07.2021)
Published in The Plant cell (19.07.2021)
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Impact of transposable elements on genome structure and evolution in bread wheat
Wicker, Thomas, Gundlach, Heidrun, Spannagl, Manuel, Uauy, Cristobal, Borrill, Philippa, Ramírez-González, Ricardo H, De Oliveira, Romain, Mayer, Klaus F X, Paux, Etienne, Choulet, Frédéric
Published in Genome Biology (17.08.2018)
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Sorghum bicolor genome and the diversification of grasses
Paterson, Andrew H, Bowers, John E, Bruggmann, Remy, Dubchak, Inna, Grimwood, Jane, Gundlach, Heidrun, Haberer, Georg, Hellsten, Uffe, Mitros, Therese, Poliakov, Alexander, Schmutz, Jeremy, Spannagl, Manuel, Tang, Haibao, Wang, Xiyin, Wicker, Thomas, Ware, Doreen
Published in Nature (London) (29.01.2009)
Published in Nature (London) (29.01.2009)
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TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
Monat, Cécile, Padmarasu, Sudharsan, Lux, Thomas, Wicker, Thomas, Gundlach, Heidrun, Himmelbach, Axel, Ens, Jennifer, Li, Chengdao, Muehlbauer, Gary J, Schulman, Alan H, Waugh, Robbie, Braumann, Ilka, Pozniak, Curtis, Scholz, Uwe, Mayer, Klaus F X, Spannagl, Manuel, Stein, Nils, Mascher, Martin
Published in Genome Biology (18.12.2019)
Published in Genome Biology (18.12.2019)
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maize disease resistance gene Htn1 against northern corn leaf blight encodes a wall-associated receptor-like kinase
Hurni, Severine, Daniela Scheuermann, Simon G. Krattinger, Bettina Kessel, Thomas Wicker, Gerhard Herren, Mirjam N. Fitze, James Breen, Thomas Presterl, Milena Ouzunova, Beat Keller
Published in Proceedings of the National Academy of Sciences - PNAS (14.07.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (14.07.2015)
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Advances in Wheat and Pathogen Genomics: Implications for Disease Control
Keller, Beat, Wicker, Thomas, Krattinger, Simon G
Published in Annual review of phytopathology (25.08.2018)
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Rapid gene isolation in barley and wheat by mutant chromosome sequencing
Sánchez-Martín, Javier, Steuernagel, Burkhard, Ghosh, Sreya, Herren, Gerhard, Hurni, Severine, Adamski, Nikolai, Vrána, Jan, Kubaláková, Marie, Krattinger, Simon G, Wicker, Thomas, Doležel, Jaroslav, Keller, Beat, Wulff, Brande B H
Published in Genome Biology (31.10.2016)
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
Stein, Joshua C., Yu, Yeisoo, Copetti, Dario, Zwickl, Derrick J., Zhang, Li, Zhang, Chengjun, Chougule, Kapeel, Gao, Dongying, Iwata, Aiko, Goicoechea, Jose Luis, Wei, Sharon, Wang, Jun, Liao, Yi, Wang, Muhua, Jacquemin, Julie, Becker, Claude, Kudrna, Dave, Zhang, Jianwei, Londono, Carlos E. M., Song, Xiang, Lee, Seunghee, Sanchez, Paul, Zuccolo, Andrea, Ammiraju, Jetty S. S., Talag, Jayson, Danowitz, Ann, Rivera, Luis F., Gschwend, Andrea R., Noutsos, Christos, Wu, Cheng-chieh, Kao, Shu-min, Zeng, Jhih-wun, Wei, Fu-jin, Zhao, Qiang, Feng, Qi, El Baidouri, Moaine, Carpentier, Marie-Christine, Lasserre, Eric, Cooke, Richard, Rosa Farias, Daniel da, da Maia, Luciano Carlos, dos Santos, Railson S., Nyberg, Kevin G., McNally, Kenneth L., Mauleon, Ramil, Alexandrov, Nickolai, Schmutz, Jeremy, Flowers, Dave, Fan, Chuanzhu, Weigel, Detlef, Jena, Kshirod K., Wicker, Thomas, Chen, Mingsheng, Han, Bin, Henry, Robert, Hsing, Yue-ie C., Kurata, Nori, de Oliveira, Antonio Costa, Panaud, Olivier, Jackson, Scott A., Machado, Carlos A., Sanderson, Michael J., Long, Manyuan, Ware, Doreen, Wing, Rod A.
Published in Nature genetics (01.02.2018)
Published in Nature genetics (01.02.2018)
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insect-specific P450 oxidative decarbonylase for cuticular hydrocarbon biosynthesis
Qiu, Yue, Tittiger, Claus, Wicker-Thomas, Claude, Le Goff, Gaëlle, Young, Sharon, Wajnberg, Eric, Fricaux, Thierry, Taquet, Nathalie, Blomquist, Gary J, Feyereisen, René
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2012)
Published in Proceedings of the National Academy of Sciences - PNAS (11.09.2012)
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A membrane-bound ankyrin repeat protein confers race-specific leaf rust disease resistance in wheat
Kolodziej, Markus C., Singla, Jyoti, Sánchez-Martín, Javier, Zbinden, Helen, Šimková, Hana, Karafiátová, Miroslava, Doležel, Jaroslav, Gronnier, Julien, Poretti, Manuel, Glauser, Gaétan, Zhu, Wangsheng, Köster, Philipp, Zipfel, Cyril, Wicker, Thomas, Krattinger, Simon G., Keller, Beat
Published in Nature communications (11.02.2021)
Published in Nature communications (11.02.2021)
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The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication
Wang, Muhua, Yu, Yeisoo, Haberer, Georg, Marri, Pradeep Reddy, Fan, Chuanzhu, Goicoechea, Jose Luis, Zuccolo, Andrea, Song, Xiang, Kudrna, Dave, Ammiraju, Jetty S S, Cossu, Rosa Maria, Maldonado, Carlos, Chen, Jinfeng, Lee, Seunghee, Sisneros, Nick, de Baynast, Kristi, Golser, Wolfgang, Wissotski, Marina, Kim, Woojin, Sanchez, Paul, Ndjiondjop, Marie-Noelle, Sanni, Kayode, Long, Manyuan, Carney, Judith, Panaud, Olivier, Wicker, Thomas, Machado, Carlos A, Chen, Mingsheng, Mayer, Klaus F X, Rounsley, Steve, Wing, Rod A
Published in Nature genetics (01.09.2014)
Published in Nature genetics (01.09.2014)
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Evolution of the Grain Dispersal System in Barley
Pourkheirandish, Mohammad, Hensel, Goetz, Kilian, Benjamin, Senthil, Natesan, Chen, Guoxiong, Sameri, Mohammad, Azhaguvel, Perumal, Sakuma, Shun, Dhanagond, Sidram, Sharma, Rajiv, Mascher, Martin, Himmelbach, Axel, Gottwald, Sven, Nair, Sudha K., Tagiri, Akemi, Yukuhiro, Fumiko, Nagamura, Yoshiaki, Kanamori, Hiroyuki, Matsumoto, Takashi, Willcox, George, Middleton, Christopher P., Wicker, Thomas, Walther, Alexander, Waugh, Robbie, Fincher, Geoffrey B., Stein, Nils, Kumlehn, Jochen, Sato, Kazuhiro, Komatsuda, Takao
Published in Cell (30.07.2015)
Published in Cell (30.07.2015)
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The AvrPm3-Pm3 effector-NLR interactions control both race-specific resistance and host-specificity of cereal mildews on wheat
Bourras, Salim, Kunz, Lukas, Xue, Minfeng, Praz, Coraline Rosalie, Müller, Marion Claudia, Kälin, Carol, Schläfli, Michael, Ackermann, Patrick, Flückiger, Simon, Parlange, Francis, Menardo, Fabrizio, Schaefer, Luisa Katharina, Ben-David, Roi, Roffler, Stefan, Oberhaensli, Simone, Widrig, Victoria, Lindner, Stefan, Isaksson, Jonatan, Wicker, Thomas, Yu, Dazhao, Keller, Beat
Published in Nature communications (23.05.2019)
Published in Nature communications (23.05.2019)
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Rapid turnover of effectors in grass powdery mildew (Blumeria graminis)
Menardo, Fabrizio, Praz, Coraline R, Wicker, Thomas, Keller, Beat
Published in BMC evolutionary biology (31.10.2017)
Published in BMC evolutionary biology (31.10.2017)
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