Statistical methods for detecting differentially abundant features in clinical metagenomic samples
White, James Robert, Nagarajan, Niranjan, Pop, Mihai
Published in PLoS computational biology (01.04.2009)
Published in PLoS computational biology (01.04.2009)
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Journal Article
Tumor Microbiome Diversity and Composition Influence Pancreatic Cancer Outcomes
Riquelme, Erick, Zhang, Yu, Zhang, Liangliang, Montiel, Maria, Zoltan, Michelle, Dong, Wenli, Quesada, Pompeyo, Sahin, Ismet, Chandra, Vidhi, San Lucas, Anthony, Scheet, Paul, Xu, Hanwen, Hanash, Samir M., Feng, Lei, Burks, Jared K., Do, Kim-Anh, Peterson, Christine B., Nejman, Deborah, Tzeng, Ching-Wei D., Kim, Michael P., Sears, Cynthia L., Ajami, Nadim, Petrosino, Joseph, Wood, Laura D., Maitra, Anirban, Straussman, Ravid, Katz, Matthew, White, James Robert, Jenq, Robert, Wargo, Jennifer, McAllister, Florencia
Published in Cell (08.08.2019)
Published in Cell (08.08.2019)
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Journal Article
Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples
Riley, David R, Sieber, Karsten B, Robinson, Kelly M, White, James Robert, Ganesan, Ashwinkumar, Nourbakhsh, Syrus, Dunning Hotopp, Julie C
Published in PLoS computational biology (01.06.2013)
Published in PLoS computational biology (01.06.2013)
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Journal Article
Using a Control to Better Understand Phyllosphere Microbiota
Ottesen, Andrea R, Gorham, Sasha, Reed, Elizabeth, Newell, Michael J, Ramachandran, Padmini, Canida, Travis, Allard, Marc, Evans, Peter, Brown, Eric, White, James Robert
Published in PloS one (26.09.2016)
Published in PloS one (26.09.2016)
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Journal Article
Cervicovaginal Fungi and Bacteria Associated With Cervical Intraepithelial Neoplasia and High-Risk Human Papillomavirus Infections in a Hispanic Population
Godoy-Vitorino, Filipa, Romaguera, Josefina, Zhao, Chunyu, Vargas-Robles, Daniela, Ortiz-Morales, Gilmary, Vázquez-Sánchez, Frances, Sanchez-Vázquez, Maria, de la Garza-Casillas, Manuel, Martinez-Ferrer, Magaly, White, James Robert, Bittinger, Kyle, Dominguez-Bello, Maria Gloria, Blaser, Martin J
Published in Frontiers in microbiology (23.10.2018)
Published in Frontiers in microbiology (23.10.2018)
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Comparative Analysis of Colon Cancer-Derived Fusobacterium nucleatum Subspecies: Inflammation and Colon Tumorigenesis in Murine Models
Queen, Jessica, Domingue, Jada C, White, James Robert, Stevens, Courtney, Udayasuryan, Barath, Nguyen, Tam T D, Wu, Shaoguang, Ding, Hua, Fan, Hongni, McMann, Madison, Corona, Alina, Larman, Tatianna C, Verbridge, Scott S, Housseau, Franck, Slade, Daniel J, Drewes, Julia L, Sears, Cynthia L
Published in mBio (08.02.2022)
Published in mBio (08.02.2022)
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Journal Article
Bacterial and fungal characterization of pancreatic adenocarcinoma from Endoscopic Ultrasound-guided biopsies
Wright, Robin D, Bartelli, Thais F, Baydogan, Seyda, White, James Robert, Kim, Michael P, Bhutani, Manoop S, McAllister, Florencia
Published in Frontiers in immunology (13.10.2023)
Published in Frontiers in immunology (13.10.2023)
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Journal Article
Clonal Hematopoiesis Is Associated With Long‐Term Adverse Outcomes Following Cardiac Surgery
Ninni, Sandro, Vicario, Rocio, Coisne, Augustin, Woitrain, Eloise, Tazibet, Amine, Stewart, Caitlin M., Diaz, Luis A., White, James Robert, Koussa, Mohammed, Dubrulle, Henri, Juthier, Francis, Jungling, Marie, Vincentelli, André, Edme, Jean‐Louis, Nattel, Stanley, de Winther, Menno, Geissmann, Frederic, Dombrowicz, David, Staels, Bart, Montaigne, David
Published in Journal of the American Heart Association (03.09.2024)
Published in Journal of the American Heart Association (03.09.2024)
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Journal Article
Gut microbial gene expression in mother-fed and formula-fed piglets
Poroyko, Valeriy, White, James Robert, Wang, Mei, Donovan, Sharon, Alverdy, John, Liu, Donald C, Morowitz, Michael J
Published in PloS one (27.08.2010)
Published in PloS one (27.08.2010)
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Journal Article
Gut microbiome meta-analysis reveals dysbiosis is independent of body mass index in predicting risk of obesity-associated CRC
Greathouse, K Leigh, White, James Robert, Padgett, R Noah, Perrotta, Brittany G, Jenkins, Gregory D, Chia, Nicholas, Chen, Jun
Published in BMJ open gastroenterology (01.01.2019)
Published in BMJ open gastroenterology (01.01.2019)
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Journal Article
Metabolic Biosynthesis Pathways Identified from Fecal Microbiome Associated with Prostate Cancer
Liss, Michael A., White, James Robert, Goros, Martin, Gelfond, Jonathan, Leach, Robin, Johnson-Pais, Teresa, Lai, Zhao, Rourke, Elizabeth, Basler, Joseph, Ankerst, Donna, Shah, Dimpy P.
Published in European urology (01.11.2018)
Published in European urology (01.11.2018)
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The potential role of lung microbiota in lung cancer attributed to household coal burning exposures
Hosgood III, H. Dean, Sapkota, Amy R., Rothman, Nathaniel, Rohan, Thomas, Hu, Wei, Xu, Jun, Vermeulen, Roel, He, Xingzhou, White, James Robert, Wu, Guoping, Wei, Fusheng, Mongodin, Emmanuel F., Lan, Qing
Published in Environmental and molecular mutagenesis (01.10.2014)
Published in Environmental and molecular mutagenesis (01.10.2014)
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Journal Article
Therapeutic administration of Tregitope-Human Albumin Fusion with Insulin Peptides to promote Antigen-Specific Adaptive Tolerance Induction
De Groot, Anne S, Skowron, Gail, White, James Robert, Boyle, Christine, Richard, Guilhem, Serreze, David, Martin, William D
Published in Scientific reports (06.11.2019)
Published in Scientific reports (06.11.2019)
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Journal Article
Hematopoietic Somatic Mosaicism Is Associated With an Increased Risk of Postoperative Atrial Fibrillation
Ninni, Sandro, Dombrowicz, David, Kuznetsova, Tanya, Vicario, Rocio, Gao, Vance, Molendi-Coste, Olivier, Haas, Joel, Woitrain, Eloise, Coisne, Augustin, Neele, Annette E., Prange, Koen, Willemsen, Lisa, Aghezzaf, Samy, Fragkogianni, Stamatina, Tazibet, Amine, Pineau, Laurent, White, James Robert, Eeckhoute, Jérôme, Koussa, Mohamed, Dubrulle, Henri, Juthier, Francis, Soquet, Jérôme, Vincentelli, André, Edme, Jean-Louis, de Winther, Menno, Geissmann, Frederic, Staels, Bart, Montaigne, David
Published in Journal of the American College of Cardiology (04.04.2023)
Published in Journal of the American College of Cardiology (04.04.2023)
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High-resolution microbiome profiling uncovers Fusobacterium nucleatum , Lactobacillus gasseri/johnsonii , and Lactobacillus vaginalis associated to oral and oropharyngeal cancer in saliva from HPV positive and HPV negative patients treated with surgery and chemo-radiation
Guerrero-Preston, Rafael, White, James Robert, Godoy-Vitorino, Filipa, Rodríguez-Hilario, Arnold, Navarro, Kelvin, González, Herminio, Michailidi, Christina, Jedlicka, Anne, Canapp, Sierra, Bondy, Jessica, Dziedzic, Amanda, Mora-Lagos, Barbara, Rivera-Alvarez, Gustavo, Ili-Gangas, Carmen, Brebi-Mieville, Priscilla, Westra, William, Koch, Wayne, Kang, Hyunseok, Marchionni, Luigi, Kim, Young, Sidransky, David
Published in Oncotarget (19.12.2017)
Published in Oncotarget (19.12.2017)
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Journal Article
Hematopoietic Somatic Mosaicism Is Associated With an Increased Risk of Postoperative Atrial Fibrillation: Hematopoietic mosaicism predisposes to postoperative atrialfibrillation
Ninni, Sandro, Dombrowicz, David, Kuznetsova, Tanya, Vicario, Rocio, Gao, Vance, Molendi-Coste, Olivier, Haas, Joel, Woitrain, Eloise, Coisne, Augustin, Neele, Annette E, Prange, Koen, Willemsen, Lisa, Aghezzaf, Samy, Fragkogianni, Stamatina, Tazibet, Amine, Pineau, Laurent, White, James Robert, Eeckhoute, Jérôme, Koussa, Mohamed, Dubrulle, Henri, Juthier, Francis, Soquet, Jérôme, Vincentelli, André, Edme, Jean-Louis, de Winther, Menno, Geissmann, Frederic, Staels, Bart, Montaigne, David
Published in Journal of the American College of Cardiology (01.04.2023)
Published in Journal of the American College of Cardiology (01.04.2023)
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Journal Article
Abstract 6673: Tumor microbial burden is regulated by mast cells and determines immunotherapy responses
Rajaei, Hajar, Jang, Jeong-Hoon, Liu, Haoyue, Faraoni, Erika Y., Le Roux, Olivia, Chandra, Vidhi, Tahan, Virginia, Li, Le, Riquelme, Erick, White, James Robert, Diaz, Luis A., McAllister, Florencia
Published in Cancer research (Chicago, Ill.) (22.03.2024)
Published in Cancer research (Chicago, Ill.) (22.03.2024)
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