Revealing disease-associated pathways by network integration of untargeted metabolomics
Pirhaji, Leila, Milani, Pamela, Leidl, Mathias, Curran, Timothy, Avila-Pacheco, Julian, Clish, Clary B, White, Forest M, Saghatelian, Alan, Fraenkel, Ernest
Published in Nature methods (01.09.2016)
Published in Nature methods (01.09.2016)
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Multiplexed relative and absolute quantitative immunopeptidomics reveals MHC I repertoire alterations induced by CDK4/6 inhibition
Stopfer, Lauren E, Mesfin, Joshua M, Joughin, Brian A, Lauffenburger, Douglas A, White, Forest M
Published in Nature communications (02.06.2020)
Published in Nature communications (02.06.2020)
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High-Density, Targeted Monitoring of Tyrosine Phosphorylation Reveals Activated Signaling Networks in Human Tumors
Stopfer, Lauren E, Flower, Cameron T, Gajadhar, Aaron S, Patel, Bhavin, Gallien, Sebastien, Lopez-Ferrer, Daniel, White, Forest M
Published in Cancer research (Chicago, Ill.) (01.05.2021)
Published in Cancer research (Chicago, Ill.) (01.05.2021)
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Journal Article
Peak learning of mass spectrometry imaging data using artificial neural networks
Abdelmoula, Walid M, Lopez, Begona Gimenez-Cassina, Randall, Elizabeth C, Kapur, Tina, Sarkaria, Jann N, White, Forest M, Agar, Jeffrey N, Wells, William M, Agar, Nathalie Y R
Published in Nature communications (20.09.2021)
Published in Nature communications (20.09.2021)
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Journal Article
Multiple Reaction Monitoring for Robust Quantitative Proteomic Analysis of Cellular Signaling Networks
Wolf-Yadlin, Alejandro, Hautaniemi, Sampsa, Lauffenburger, Douglas A., White, Forest M.
Published in Proceedings of the National Academy of Sciences - PNAS (03.04.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (03.04.2007)
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Journal Article
Localized Metabolomic Gradients in Patient-Derived Xenograft Models of Glioblastoma
Randall, Elizabeth C, Lopez, Begoña G C, Peng, Sen, Regan, Michael S, Abdelmoula, Walid M, Basu, Sankha S, Santagata, Sandro, Yoon, Haejin, Haigis, Marcia C, Agar, Jeffrey N, Tran, Nhan L, Elmquist, William F, White, Forest M, Sarkaria, Jann N, Agar, Nathalie Y R
Published in Cancer research (Chicago, Ill.) (15.03.2020)
Published in Cancer research (Chicago, Ill.) (15.03.2020)
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Journal Article
The Physics of Cancer
White, Forest M, Gatenby, Robert A, Fischbach, Claudia
Published in Cancer research (Chicago, Ill.) (01.05.2019)
Published in Cancer research (Chicago, Ill.) (01.05.2019)
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Journal Article
ATRX directs binding of PRC2 to Xist RNA and Polycomb targets
Sarma, Kavitha, Cifuentes-Rojas, Catherine, Ergun, Ayla, Del Rosario, Amanda, Jeon, Yesu, White, Forest, Sadreyev, Ruslan, Lee, Jeannie T
Published in Cell (06.11.2014)
Published in Cell (06.11.2014)
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Journal Article
Deciphering the immunopeptidome in vivo reveals new tumour antigens
Jaeger, Alex M, Stopfer, Lauren E, Ahn, Ryuhjin, Sanders, Emma A, Sandel, Demi A, Freed-Pastor, William A, Rideout, 3rd, William M, Naranjo, Santiago, Fessenden, Tim, Nguyen, Kim B, Winter, Peter S, Kohn, Ryan E, Westcott, Peter M K, Schenkel, Jason M, Shanahan, Sean-Luc, Shalek, Alex K, Spranger, Stefani, White, Forest M, Jacks, Tyler
Published in Nature (London) (07.07.2022)
Published in Nature (London) (07.07.2022)
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Journal Article
Quantitative Analysis of EGFRvIII Cellular Signaling Networks Reveals a Combinatorial Therapeutic Strategy for Glioblastoma
Huang, Paul H., Mukasa, Akitake, Bonavia, Rudy, Flynn, Ryan A., Brewer, Zachary E., Cavenee, Webster K., Furnari, Frank B., White, Forest M.
Published in Proceedings of the National Academy of Sciences - PNAS (31.07.2007)
Published in Proceedings of the National Academy of Sciences - PNAS (31.07.2007)
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Journal Article
MEK inhibition enhances presentation of targetable MHC-I tumor antigens in mutant melanomas
Stopfer, Lauren E, Rettko, Nicholas J, Leddy, Owen, Mesfin, Joshua M, Brown, Eric, Winski, Shannon, Bryson, Bryan, Wells, James A, White, Forest M
Published in Nevada RNformation (06.12.2022)
Published in Nevada RNformation (06.12.2022)
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Absolute quantification of tumor antigens using embedded MHC-I isotopologue calibrants
Stopfer, Lauren E, Gajadhar, Aaron S, Patel, Bhavin, Gallien, Sebastien, Frederick, Dennie T, Boland, Genevieve M, Sullivan, Ryan J, White, Forest M
Published in Proceedings of the National Academy of Sciences - PNAS (14.09.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (14.09.2021)
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Journal Article
SirT1 is required in the male germ cell for differentiation and fecundity in mice
Bell, Eric L, Nagamori, Ippei, Williams, Eric O, Del Rosario, Amanda M, Bryson, Bryan D, Watson, Nicki, White, Forest M, Sassone-Corsi, Paolo, Guarente, Leonard
Published in Development (Cambridge) (01.09.2014)
Published in Development (Cambridge) (01.09.2014)
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