A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories
Götz, Markus, Barth, Anders, Bohr, Søren S.-R., Börner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Mélodie C. A. S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A. M., Sigel, Roland K. O., Sletfjerding, Magnus Berg, Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja
Published in Nature communications (14.09.2022)
Published in Nature communications (14.09.2022)
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Journal Article
Beyond the Random Coil: Stochastic Conformational Switching in Intrinsically Disordered Proteins
Choi, Ucheor B., McCann, James J., Weninger, Keith R., Bowen, Mark E.
Published in Structure (London) (13.04.2011)
Published in Structure (London) (13.04.2011)
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Journal Article
MutL traps MutS at a DNA mismatch
Qiu, Ruoyi, Sakato, Miho, Sacho, Elizabeth J., Wilkins, Hunter, Zhang, Xingdong, Modrich, Paul, Hingorani, Manju M., Erie, Dorothy A., Weninger, Keith R.
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (01.09.2015)
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Journal Article
Single Molecule FRET: A Powerful Tool to Study Intrinsically Disordered Proteins
LeBlanc, Sharonda J, Kulkarni, Prakash, Weninger, Keith R
Published in Biomolecules (Basel, Switzerland) (08.11.2018)
Published in Biomolecules (Basel, Switzerland) (08.11.2018)
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Journal Article
Cancer/Testis Antigen PAGE4, a Regulator of c‑Jun Transactivation, Is Phosphorylated by Homeodomain-Interacting Protein Kinase 1, a Component of the Stress-Response Pathway
Mooney, Steven M, Qiu, Ruoyi, Kim, John J, Sacho, Elizabeth J, Rajagopalan, Krithika, Johng, Dorhyun, Shiraishi, Takumi, Kulkarni, Prakash, Weninger, Keith R
Published in Biochemistry (Easton) (18.03.2014)
Published in Biochemistry (Easton) (18.03.2014)
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Journal Article
How Membrane Geometry Regulates Protein Sorting Independently of Mean Curvature
Larsen, Jannik B, Rosholm, Kadla R, Kennard, Celeste, Pedersen, Søren L, Munch, Henrik K, Tkach, Vadym, Sakon, John J, Bjørnholm, Thomas, Weninger, Keith R, Bendix, Poul Martin, Jensen, Knud J, Hatzakis, Nikos S, Uline, Mark J, Stamou, Dimitrios
Published in ACS central science (22.07.2020)
Published in ACS central science (22.07.2020)
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Journal Article
Single-molecule FRET–derived model of the synaptotagmin 1–SNARE fusion complex
Choi, Ucheor B, Strop, Pavel, Vrljic, Marija, Chu, Steven, Brunger, Axel T, Weninger, Keith R
Published in Nature structural & molecular biology (01.03.2010)
Published in Nature structural & molecular biology (01.03.2010)
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Journal Article
Recurrent mismatch binding by MutS mobile clamps on DNA localizes repair complexes nearby
Hao, Pengyu, LeBlanc, Sharonda J., Case, Brandon C., Elston, Timothy C., Hingorani, Manju M., Erie, Dorothy A., Weninge, Keith R.
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (28.07.2020)
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Journal Article
Dynamic human MutSα–MutLα complexes compact mismatched DNA
Bradford, Kira C., Wilkins, Hunter, Hao, Pengyu, Li, Zimeng M., Wang, Bangchen, Burke, Dan, Wu, Dong, Smith, Austin E., Spaller, Logan, Du, Chunwei, Gauer, Jacob W., Chan, Edward, Hsieh, Peggy, Weninger, Keith R., Erie, Dorothy A.
Published in Proceedings of the National Academy of Sciences - PNAS (14.07.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (14.07.2020)
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Journal Article
Three-dimensional molecular modeling with single molecule FRET
Brunger, Axel T., Strop, Pavel, Vrljic, Marija, Chu, Steven, Weninger, Keith R.
Published in Journal of structural biology (01.03.2011)
Published in Journal of structural biology (01.03.2011)
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Journal Article
Non-ergodicity of a globular protein extending beyond its functional timescale
Li, Jun, Xie, JingFei, Godec, Alja, Weninger, Keith R, Liu, Cong, Smith, Jeremy C, Hong, Liang
Published in Chemical science (Cambridge) (24.08.2022)
Published in Chemical science (Cambridge) (24.08.2022)
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Journal Article
Reply to: On the statistical foundation of a recent single molecule FRET benchmark
Götz, Markus, Barth, Anders, Bohr, Søren S. -R., Börner, Richard, Chen, Jixin, Cordes, Thorben, Erie, Dorothy A., Gebhardt, Christian, Hadzic, Mélodie C. A. S., Hamilton, George L., Hatzakis, Nikos S., Hugel, Thorsten, Kisley, Lydia, Lamb, Don C., de Lannoy, Carlos, Mahn, Chelsea, Dunukara, Dushani, de Ridder, Dick, Sanabria, Hugo, Schimpf, Julia, Seidel, Claus A. M., Sigel, Roland K. O., Sletfjerding, Magnus B., Thomsen, Johannes, Vollmar, Leonie, Wanninger, Simon, Weninger, Keith R., Xu, Pengning, Schmid, Sonja
Published in Nature communications (30.04.2024)
Published in Nature communications (30.04.2024)
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Journal Article
The Stress-response protein prostate-associated gene 4, interacts with c-Jun and potentiates its transactivation
Rajagopalan, Krithika, Qiu, Ruoyi, Mooney, Steven M., Rao, Shweta, Shiraishi, Takumi, Sacho, Elizabeth, Huang, Hongying, Shapiro, Ellen, Weninger, Keith R., Kulkarni, Prakash
Published in Biochimica et biophysica acta (01.02.2014)
Published in Biochimica et biophysica acta (01.02.2014)
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