The long-term genetic stability and individual specificity of the human gut microbiome
Chen, Lianmin, Wang, Daoming, Garmaeva, Sanzhima, Kurilshikov, Alexander, Vich Vila, Arnau, Gacesa, Ranko, Sinha, Trishla, Segal, Eran, Weersma, Rinse K., Wijmenga, Cisca, Zhernakova, Alexandra, Fu, Jingyuan
Published in Cell (29.04.2021)
Published in Cell (29.04.2021)
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Journal Article
Impact of commonly used drugs on the composition and metabolic function of the gut microbiota
Vich Vila, Arnau, Collij, Valerie, Sanna, Serena, Sinha, Trishla, Imhann, Floris, Bourgonje, Arno R., Mujagic, Zlatan, Jonkers, Daisy M. A. E., Masclee, Ad A. M., Fu, Jingyuan, Kurilshikov, Alexander, Wijmenga, Cisca, Zhernakova, Alexandra, Weersma, Rinse K.
Published in Nature communications (17.01.2020)
Published in Nature communications (17.01.2020)
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Journal Article
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
Zhernakova, Alexandra, Kurilshikov, Alexander, Bonder, Marc Jan, Tigchelaar, Ettje F., Schirmer, Melanie, Vatanen, Tommi, Mujagic, Zlatan, Vila, Arnau Vich, Falony, Gwen, Vieira-Silva, Sara, Wang, Jun, Imhann, Floris, Brandsma, Eelke, Jankipersadsing, Soesma A., Joossens, Marie, Cenit, Maria Carmen, Deelen, Patrick, Swertz, Morris A., study, LifeLines cohort, Weersma, Rinse K., Feskens, Edith J. M., Netea, Mihai G., Gevers, Dirk, Jonkers, Daisy, Franke, Lude, Aulchenko, Yurii S., Huttenhower, Curtis, Raes, Jeroen, Hofker, Marten H., Xavier, Ramnik J., Wijmenga, Cisca, Fu, Jingyuan
Published in Science (American Association for the Advancement of Science) (29.04.2016)
Published in Science (American Association for the Advancement of Science) (29.04.2016)
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Journal Article
Interplay of host genetics and gut microbiota underlying the onset and clinical presentation of inflammatory bowel disease
Imhann, Floris, Vich Vila, Arnau, Bonder, Marc Jan, Fu, Jingyuan, Gevers, Dirk, Visschedijk, Marijn C, Spekhorst, Lieke M, Alberts, Rudi, Franke, Lude, van Dullemen, Hendrik M, Ter Steege, Rinze W F, Huttenhower, Curtis, Dijkstra, Gerard, Xavier, Ramnik J, Festen, Eleonora A M, Wijmenga, Cisca, Zhernakova, Alexandra, Weersma, Rinse K
Published in Gut (01.01.2018)
Published in Gut (01.01.2018)
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Journal Article
The role of the microbiome for human health: from basic science to clinical applications
Mohajeri, M. Hasan, Brummer, Robert J. M., Rastall, Robert A., Weersma, Rinse K., Harmsen, Hermie J. M., Faas, Marijke, Eggersdorfer, Manfred
Published in European journal of nutrition (01.05.2018)
Published in European journal of nutrition (01.05.2018)
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Journal Article
The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood Lipids
Fu, Jingyuan, Bonder, Marc Jan, Cenit, María Carmen, Tigchelaar, Ettje F, Maatman, Astrid, Dekens, Jackie A.M, Brandsma, Eelke, Marczynska, Joanna, Imhann, Floris, Weersma, Rinse K, Franke, Lude, Poon, Tiffany W, Xavier, Ramnik J, Gevers, Dirk, Hofker, Marten H, Wijmenga, Cisca, Zhernakova, Alexandra
Published in Circulation research (09.10.2015)
Published in Circulation research (09.10.2015)
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Journal Article
The effect of host genetics on the gut microbiome
Bonder, Marc Jan, Kurilshikov, Alexander, Tigchelaar, Ettje F, Mujagic, Zlatan, Imhann, Floris, Vila, Arnau Vich, Deelen, Patrick, Vatanen, Tommi, Schirmer, Melanie, Smeekens, Sanne P, Zhernakova, Daria V, Jankipersadsing, Soesma A, Jaeger, Martin, Oosting, Marije, Cenit, Maria Carmen, Masclee, Ad A M, Swertz, Morris A, Li, Yang, Kumar, Vinod, Joosten, Leo, Harmsen, Hermie, Weersma, Rinse K, Franke, Lude, Hofker, Marten H, Xavier, Ramnik J, Jonkers, Daisy, Netea, Mihai G, Wijmenga, Cisca, Fu, Jingyuan, Zhernakova, Alexandra
Published in Nature genetics (01.11.2016)
Published in Nature genetics (01.11.2016)
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Journal Article
Gut microbiota composition and functional changes in inflammatory bowel disease and irritable bowel syndrome
Vich Vila, Arnau, Imhann, Floris, Collij, Valerie, Jankipersadsing, Soesma A, Gurry, Thomas, Mujagic, Zlatan, Kurilshikov, Alexander, Bonder, Marc Jan, Jiang, Xiaofang, Tigchelaar, Ettje F, Dekens, Jackie, Peters, Vera, Voskuil, Michiel D, Visschedijk, Marijn C, van Dullemen, Hendrik M, Keszthelyi, Daniel, Swertz, Morris A, Franke, Lude, Alberts, Rudi, Festen, Eleonora A M, Dijkstra, Gerard, Masclee, Ad A M, Hofker, Marten H, Xavier, Ramnik J, Alm, Eric J, Fu, Jingyuan, Wijmenga, Cisca, Jonkers, Daisy M A E, Zhernakova, Alexandra, Weersma, Rinse K
Published in Science translational medicine (19.12.2018)
Published in Science translational medicine (19.12.2018)
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Journal Article
Pharmacomicrobiomics: a novel route towards personalized medicine?
Doestzada, Marwah, Vich Vila, Arnau, Zhernakova, Alexandra, P. Y. Koonen, Debby, K. Weersma, Rinse, J. Touw, Daan, Kuipers, Folkert, Wijmenga, Cisca, Fu, Jingyuan
Published in Protein & cell (01.05.2018)
Published in Protein & cell (01.05.2018)
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Journal Article
Distinctive inflammatory bowel disease phenotype in primary sclerosing cholangitis
de Vries, A Boudewijn, Janse, Marcel, Blokzijl, Hans, Weersma, Rinse K
Published in World journal of gastroenterology : WJG (14.02.2015)
Published in World journal of gastroenterology : WJG (14.02.2015)
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Journal Article
Shared gut, but distinct oral microbiota composition in primary Sjögren's syndrome and systemic lupus erythematosus
van der Meulen, Taco A., Harmsen, Hermie J.M., Vila, Arnau Vich, Kurilshikov, Alexander, Liefers, Silvia C., Zhernakova, Alexandra, Fu, Jingyuan, Wijmenga, Cisca, Weersma, Rinse K., de Leeuw, Karina, Bootsma, Hendrika, Spijkervet, Fred K.L., Vissink, Arjan, Kroese, Frans G.M.
Published in Journal of autoimmunity (01.02.2019)
Published in Journal of autoimmunity (01.02.2019)
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Journal Article
Gut microbiome structure and metabolic activity in inflammatory bowel disease
Franzosa, Eric A., Sirota-Madi, Alexandra, Avila-Pacheco, Julian, Fornelos, Nadine, Haiser, Henry J., Reinker, Stefan, Vatanen, Tommi, Hall, A. Brantley, Mallick, Himel, McIver, Lauren J., Sauk, Jenny S., Wilson, Robin G., Stevens, Betsy W., Scott, Justin M., Pierce, Kerry, Deik, Amy A., Bullock, Kevin, Imhann, Floris, Porter, Jeffrey A., Zhernakova, Alexandra, Fu, Jingyuan, Weersma, Rinse K., Wijmenga, Cisca, Clish, Clary B., Vlamakis, Hera, Huttenhower, Curtis, Xavier, Ramnik J.
Published in Nature microbiology (01.02.2019)
Published in Nature microbiology (01.02.2019)
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Journal Article
Population‐based epidemiology, malignancy risk, and outcome of primary sclerosing cholangitis
Boonstra, Kirsten, Weersma, Rinse K., Erpecum, Karel J., Rauws, Erik A., Spanier, B.W. Marcel, Poen, Alexander C., Nieuwkerk, Karin M., Drenth, Joost P., Witteman, Ben J., Tuynman, Hans A., Naber, Anton H., Kingma, Paul J., Buuren, Henk R., Hoek, Bart, Vleggaar, Frank P., Geloven, Nan, Beuers, Ulrich, Ponsioen, Cyriel Y.
Published in Hepatology (Baltimore, Md.) (01.12.2013)
Published in Hepatology (Baltimore, Md.) (01.12.2013)
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Journal Article
Gut microbial co-abundance networks show specificity in inflammatory bowel disease and obesity
Chen, Lianmin, Collij, Valerie, Jaeger, Martin, van den Munckhof, Inge C. L., Vich Vila, Arnau, Kurilshikov, Alexander, Gacesa, Ranko, Sinha, Trishla, Oosting, Marije, Joosten, Leo A. B., Rutten, Joost H. W., Riksen, Niels P., Xavier, Ramnik J., Kuipers, Folkert, Wijmenga, Cisca, Zhernakova, Alexandra, Netea, Mihai G., Weersma, Rinse K., Fu, Jingyuan
Published in Nature communications (11.08.2020)
Published in Nature communications (11.08.2020)
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Journal Article
The emerging role of the small intestinal microbiota in human health and disease
Ruigrok, Renate A. A. A., Weersma, Rinse K., Vich Vila, Arnau
Published in Gut microbes (31.12.2023)
Published in Gut microbes (31.12.2023)
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Journal Article
The influence of proton pump inhibitors and other commonly used medication on the gut microbiota
Imhann, Floris, Vich Vila, Arnau, Bonder, Marc Jan, Lopez Manosalva, Ailine G., Koonen, Debby P.Y., Fu, Jingyuan, Wijmenga, Cisca, Zhernakova, Alexandra, Weersma, Rinse K.
Published in Gut microbes (04.07.2017)
Published in Gut microbes (04.07.2017)
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Journal Article
Genetic effects on the commensal microbiota in inflammatory bowel disease patients
Aschard, Hugues, Laville, Vincent, Tchetgen, Eric Tchetgen, Knights, Dan, Imhann, Floris, Seksik, Philippe, Zaitlen, Noah, Silverberg, Mark S, Cosnes, Jacques, Weersma, Rinse K, Xavier, Ramnik, Beaugerie, Laurent, Skurnik, David, Sokol, Harry
Published in PLoS genetics (08.03.2019)
Published in PLoS genetics (08.03.2019)
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Journal Article
A meta-analysis of genome-wide association scans identifies IL18RAP, PTPN2, TAGAP, and PUS10 as shared risk loci for Crohn's disease and celiac disease
Festen, Eleonora A M, Goyette, Philippe, Green, Todd, Boucher, Gabrielle, Beauchamp, Claudine, Trynka, Gosia, Dubois, Patrick C, Lagacé, Caroline, Stokkers, Pieter C F, Hommes, Daan W, Barisani, Donatella, Palmieri, Orazio, Annese, Vito, van Heel, David A, Weersma, Rinse K, Daly, Mark J, Wijmenga, Cisca, Rioux, John D
Published in PLoS genetics (01.01.2011)
Published in PLoS genetics (01.01.2011)
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