Inhibition of Endosteal Vascular Niche Remodeling Rescues Hematopoietic Stem Cell Loss in AML
Duarte, Delfim, Hawkins, Edwin D., Akinduro, Olufolake, Ang, Heather, De Filippo, Katia, Kong, Isabella Y., Haltalli, Myriam, Ruivo, Nicola, Straszkowski, Lenny, Vervoort, Stephin J., McLean, Catriona, Weber, Tom S., Khorshed, Reema, Pirillo, Chiara, Wei, Andrew, Ramasamy, Saravana K., Kusumbe, Anjali P., Duffy, Ken, Adams, Ralf H., Purton, Louise E., Carlin, Leo M., Lo Celso, Cristina
Published in Cell stem cell (04.01.2018)
Published in Cell stem cell (04.01.2018)
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Non-genetic determinants of malignant clonal fitness at single-cell resolution
Fennell, Katie A, Vassiliadis, Dane, Lam, Enid Y N, Martelotto, Luciano G, Balic, Jesse J, Hollizeck, Sebastian, Weber, Tom S, Semple, Timothy, Wang, Qing, Miles, Denise C, MacPherson, Laura, Chan, Yih-Chih, Guirguis, Andrew A, Kats, Lev M, Wong, Emily S, Dawson, Sarah-Jane, Naik, Shalin H, Dawson, Mark A
Published in Nature (London) (06.01.2022)
Published in Nature (London) (06.01.2022)
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Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments
Tian, Luyi, Dong, Xueyi, Freytag, Saskia, Lê Cao, Kim-Anh, Su, Shian, JalalAbadi, Abolfazl, Amann-Zalcenstein, Daniela, Weber, Tom S, Seidi, Azadeh, Jabbari, Jafar S, Naik, Shalin H, Ritchie, Matthew E
Published in Nature methods (01.06.2019)
Published in Nature methods (01.06.2019)
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Journal Article
Replicative history marks transcriptional and functional disparity in the CD8 + T cell memory pool
Bresser, Kaspar, Kok, Lianne, Swain, Arpit C, King, Lisa A, Jacobs, Laura, Weber, Tom S, Perié, Leïla, Duffy, Ken R, de Boer, Rob J, Scheeren, Ferenc A, Schumacher, Ton N
Published in Nature immunology (01.05.2022)
Published in Nature immunology (01.05.2022)
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Journal Article
Sample path properties of the average generation of a Bellman–Harris process
Meli, Gianfelice, Weber, Tom S., Duffy, Ken R.
Published in Journal of mathematical biology (01.07.2019)
Published in Journal of mathematical biology (01.07.2019)
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Journal Article
Clonal multi-omics reveals Bcor as a negative regulator of emergency dendritic cell development
Tian, Luyi, Tomei, Sara, Schreuder, Jaring, Weber, Tom S., Amann-Zalcenstein, Daniela, Lin, Dawn S., Tran, Jessica, Audiger, Cindy, Chu, Mathew, Jarratt, Andrew, Willson, Tracy, Hilton, Adrienne, Pang, Ee Shan, Patton, Timothy, Kelly, Madison, Su, Shian, Gouil, Quentin, Diakumis, Peter, Bahlo, Melanie, Sargeant, Toby, Kats, Lev M., Hodgkin, Philip D., O’Keeffe, Meredith, Ng, Ashley P., Ritchie, Matthew E., Naik, Shalin H.
Published in Immunity (Cambridge, Mass.) (08.06.2021)
Published in Immunity (Cambridge, Mass.) (08.06.2021)
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Journal Article
Single-cell analyses reveal the clonal and molecular aetiology of Flt3L-induced emergency dendritic cell development
Lin, Dawn S, Tian, Luyi, Tomei, Sara, Amann-Zalcenstein, Daniela, Baldwin, Tracey M, Weber, Tom S, Schreuder, Jaring, Stonehouse, Olivia J, Rautela, Jai, Huntington, Nicholas D, Taoudi, Samir, Ritchie, Matthew E, Hodgkin, Philip D, Ng, Ashley P, Nutt, Stephen L, Naik, Shalin H
Published in Nature cell biology (01.03.2021)
Published in Nature cell biology (01.03.2021)
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Journal Article
Author Correction: Replicative history marks transcriptional and functional disparity in the CD8 + T cell memory pool
Bresser, Kaspar, Kok, Lianne, Swain, Arpit C, King, Lisa A, Jacobs, Laura, Weber, Tom S, Perié, Leïla, Duffy, Ken R, de Boer, Rob J, Scheeren, Ferenc A, Schumacher, Ton N
Published in Nature immunology (01.07.2022)
Published in Nature immunology (01.07.2022)
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Journal Article
Clonal analysis of fetal hematopoietic stem/progenitor cells reveals how post-transplantation capabilities are distributed
Stonehouse, Olivia J., Biben, Christine, Weber, Tom S., Garnham, Alexandra, Fennell, Katie A., Farley, Alison, Terreaux, Antoine F., Alexander, Warren S., Dawson, Mark A., Naik, Shalin H., Taoudi, Samir
Published in Stem cell reports (13.08.2024)
Published in Stem cell reports (13.08.2024)
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Journal Article
Inferring average generation via division-linked labeling
Weber, Tom S., Perié, Leïla, Duffy, Ken R.
Published in Journal of mathematical biology (01.08.2016)
Published in Journal of mathematical biology (01.08.2016)
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Journal Article
Site-specific recombinatorics: in situ cellular barcoding with the Cre Lox system
Weber, Tom S, Dukes, Mark, Miles, Denise C, Glaser, Stefan P, Naik, Shalin H, Duffy, Ken R
Published in BMC systems biology (30.06.2016)
Published in BMC systems biology (30.06.2016)
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Broad Volume Distributions Indicate Nonsynchronized Growth and Suggest Sudden Collapses of Germinal Center B Cell Populations
Wittenbrink, Nicole, Weber, Tom S, Klein, Anke, Weiser, Armin A, Zuschratter, Werner, Sibila, Michael, Schuchhardt, Johannes, Or-Guil, Michal
Published in The Journal of immunology (1950) (01.02.2010)
Published in The Journal of immunology (1950) (01.02.2010)
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Journal Article
Sample Path Properties of the Average Generation of a Bellman-Harris Process
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Journal Article
Clonal analysis of fetal hematopoietic stem/progenitor cell subsets reveals how post-transplantation capabilities are distributed
Stonehouse, Olivia, Biben, Christine, Weber, Tom S, Garnham, Alexandra, Fennell, Katie, Farley, Alison, Terreaux, Antoine, Warren, Alexander, Dawson, Mark, Naik, Shalin, Taoudi, Samir
Published in bioRxiv (19.02.2024)
Published in bioRxiv (19.02.2024)
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Site-specific recombinatorics: in situ cellular barcoding with the Cre Lox system
Weber, Tom S, Dukes, Mark, Miles, Denise, Glaser, Stefan, Naik, Shalin, Duffy, Ken R
Published in arXiv.org (28.02.2016)
Published in arXiv.org (28.02.2016)
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Journal Article
The clonal and molecular aetiology of emergency dendritic cell development
Lin, Dawn S, Tian, Luyi, Tomei, Sara, Amann-Zalcenstein, Daniela, Baldwin, Tracey M, Weber, Tom S, Schreuder, Jaring, Stonehouse, Olivia, Rautela, Jai, Huntington, Nicholas D, Ng, Ashley P, Nutt, Stephen L, Taoudi, Samir, Ritchie, Matthew E, Hodgkin, Philip D, Naik, Shalin H
Published in bioRxiv (30.05.2020)
Published in bioRxiv (30.05.2020)
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scRNA-seq mixology: towards better benchmarking of single cell RNA-seq analysis methods
Tian, Luyi, Dong, Xueyi, Freytag, Saskia, Kim-Anh Le Cao, Su, Shian, Jalalabadi, Abolfazl, Amann-Zalcenstein, Daniela, Weber, Tom S, Seidi, Azadeh, Jabbari, Jafar S, Naik, Shalin, Ritchie, Matthew E
Published in bioRxiv (15.03.2019)
Published in bioRxiv (15.03.2019)
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