Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells
Grow, Edward J., Flynn, Ryan A., Chavez, Shawn L., Bayless, Nicholas L., Wossidlo, Mark, Wesche, Daniel J., Martin, Lance, Ware, Carol B., Blish, Catherine A., Chang, Howard Y., Reijo Pera, Renee A., Wysocka, Joanna
Published in Nature (London) (11.06.2015)
Published in Nature (London) (11.06.2015)
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Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data
Kim, Hyeon-Jin, Yardimci, Galip Gürkan, Bonora, Giancarlo, Ramani, Vijay, Liu, Jie, Qiu, Ruolan, Lee, Choli, Hesson, Jennifer, Ware, Carol B, Shendure, Jay, Duan, Zhijun, Noble, William Stafford
Published in PLoS computational biology (18.09.2020)
Published in PLoS computational biology (18.09.2020)
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Journal Article
The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition
Sperber, Henrik, Mathieu, Julie, Wang, Yuliang, Ferreccio, Amy, Hesson, Jennifer, Xu, Zhuojin, Fischer, Karin A., Devi, Arikketh, Detraux, Damien, Gu, Haiwei, Battle, Stephanie L., Showalter, Megan, Valensisi, Cristina, Bielas, Jason H., Ericson, Nolan G., Margaretha, Lilyana, Robitaille, Aaron M., Margineantu, Daciana, Fiehn, Oliver, Hockenbery, David, Blau, C. Anthony, Raftery, Daniel, Margolin, Adam A., Hawkins, R. David, Moon, Randall T., Ware, Carol B., Ruohola-Baker, Hannele
Published in Nature cell biology (01.12.2015)
Published in Nature cell biology (01.12.2015)
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Journal Article
Derivation of naïve human embryonic stem cells
Ware, Carol B., Nelson, Angelique M., Mecham, Brigham, Hesson, Jennifer, Zhou, Wenyu, Jonlin, Erica C., Jimenez-Caliani, Antonio J., Deng, Xinxian, Cavanaugh, Christopher, Cook, Savannah, Tesar, Paul J., Okada, Jeffrey, Margaretha, Lilyana, Sperber, Henrik, Choi, Michael, Balu, C. Anthony, Treuting, Piper M., Hawkins, R. David, Cirulli, Vincenzo, Ruohola-Baker, Hannele
Published in Proceedings of the National Academy of Sciences - PNAS (25.03.2014)
Published in Proceedings of the National Academy of Sciences - PNAS (25.03.2014)
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Journal Article
Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes
Ma, Wenxiu, Ay, Ferhat, Lee, Choli, Gulsoy, Gunhan, Deng, Xinxian, Cook, Savannah, Hesson, Jennifer, Cavanaugh, Christopher, Ware, Carol B, Krumm, Anton, Shendure, Jay, Blau, Carl Anthony, Disteche, Christine M, Noble, William S, Duan, Zhijun
Published in Nature methods (01.01.2015)
Published in Nature methods (01.01.2015)
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Journal Article
Facioscapulohumeral dystrophy: incomplete suppression of a retrotransposed gene
Snider, Lauren, Geng, Linda N, Lemmers, Richard J L F, Kyba, Michael, Ware, Carol B, Nelson, Angelique M, Tawil, Rabi, Filippova, Galina N, van der Maarel, Silvère M, Tapscott, Stephen J, Miller, Daniel G
Published in PLoS genetics (28.10.2010)
Published in PLoS genetics (28.10.2010)
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Transplantation of undifferentiated murine embryonic stem cells in the heart: teratoma formation and immune response
Nussbaum, Jeannette, Minami, Elina, Laflamme, Michael A, Virag, Jitka A I, Ware, Carol B, Masino, Amanda, Muskheli, Veronica, Pabon, Lil, Reinecke, Hans, Murry, Charles E
Published in The FASEB journal (01.05.2007)
Published in The FASEB journal (01.05.2007)
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Journal Article
Self-renewal of human embryonic stem cells requires insulin-like growth factor-1 receptor and ERBB2 receptor signaling
Wang, Linlin, Schulz, Thomas C., Sherrer, Eric S., Dauphin, Derek S., Shin, Soojung, Nelson, Angelique M., Ware, Carol B., Zhan, Mei, Song, Chao-Zhong, Chen, Xiaoji, Brimble, Sandii N., McLean, Amanda, Galeano, Maria J., Uhl, Elizabeth W., D'Amour, Kevin A., Chesnut, Jonathan D., Rao, Mahendra S., Blau, C. Anthony, Robins, Allan J.
Published in Blood (01.12.2007)
Published in Blood (01.12.2007)
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Journal Article
Histone Deacetylase Inhibition Elicits an Evolutionarily Conserved Self-Renewal Program in Embryonic Stem Cells
Ware, Carol B., Wang, Linlin, Mecham, Brigham H., Shen, Lanlan, Nelson, Angelique M., Bar, Merav, Lamba, Deepak A., Dauphin, Derek S., Buckingham, Brian, Askari, Bardia, Lim, Raymond, Tewari, Muneesh, Gartler, Stanley M., Issa, Jean-Pierre, Pavlidis, Paul, Duan, Zhijun, Blau, C. Anthony
Published in Cell stem cell (03.04.2009)
Published in Cell stem cell (03.04.2009)
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Journal Article
Epigenetic memory via concordant DNA methylation is inversely correlated to developmental potential of mammalian cells
Choi, Minseung, Genereux, Diane P, Goodson, Jamie, Al-Azzawi, Haneen, Allain, Shannon Q, Simon, Noah, Palasek, Stan, Ware, Carol B, Cavanaugh, Chris, Miller, Daniel G, Johnson, Winslow C, Sinclair, Kevin D, Stöger, Reinhard, Laird, Charles D
Published in PLoS genetics (06.11.2017)
Published in PLoS genetics (06.11.2017)
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Journal Article
Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States
Battle, Stephanie L., Doni Jayavelu, Naresh, Azad, Robert N., Hesson, Jennifer, Ahmed, Faria N., Overbey, Eliah G., Zoller, Joseph A., Mathieu, Julie, Ruohola-Baker, Hannele, Ware, Carol B., Hawkins, R. David
Published in Stem cell reports (14.05.2019)
Published in Stem cell reports (14.05.2019)
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Journal Article
Glutamate Cysteine Ligase Modifier Subunit Deficiency and Gender as Determinants of Acetaminophen-Induced Hepatotoxicity in Mice
McConnachie, Lisa A., Mohar, Isaac, Hudson, Francesca N., Ware, Carol B., Ladiges, Warren C., Fernandez, Carolina, Chatterton-Kirchmeier, Sam, White, Collin C., Pierce, Robert H., Kavanagh, Terrance J.
Published in Toxicological sciences (01.10.2007)
Published in Toxicological sciences (01.10.2007)
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Journal Article
Connexin 43 Functions as a Positive Regulator of Stem Cell Differentiation into Definitive Endoderm and Pancreatic Progenitors
Yang, Wendy, Lampe, Paul D., Kensel-Hammes, Patricia, Hesson, Jennifer, Ware, Carol B., Crisa, Laura, Cirulli, Vincenzo
Published in iScience (27.09.2019)
Published in iScience (27.09.2019)
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Journal Article
A knock-in mouse model of gastrointestinal stromal tumor harboring Kit K641E
RUBIN, Brian P, ANTONESCU, Cristina R, SCOTT-BROWNE, James P, COMSTOCK, Melissa L, YANSONG GU, TANAS, Munir R, WARE, Carol B, WOODELL, Jessica
Published in Cancer research (Chicago, Ill.) (01.08.2005)
Published in Cancer research (Chicago, Ill.) (01.08.2005)
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Journal Article
A Comparison of NIH‐Approved Human ESC Lines
Ware, Carol B., Nelson, Angelique M., Blau, C. Anthony
Published in Stem cells (Dayton, Ohio) (01.12.2006)
Published in Stem cells (Dayton, Ohio) (01.12.2006)
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Journal Article
TNF Receptor-Deficient Mice Reveal Divergent Roles for p55 and p75 in Several Models of Inflammation
Peschon, Jacques J, Torrance, Dauphine S, Stocking, Kim L, Glaccum, Moira B, Otten, Carol, Willis, Cynthia R, Charrier, Keith, Morrissey, Philip J, Ware, Carol B, Mohler, Kendall M
Published in The Journal of immunology (1950) (15.01.1998)
Published in The Journal of immunology (1950) (15.01.1998)
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