Impact of regulatory variation across human iPSCs and differentiated cells
Banovich, Nicholas E, Li, Yang I, Raj, Anil, Ward, Michelle C, Greenside, Peyton, Calderon, Diego, Tung, Po Yuan, Burnett, Jonathan E, Myrthil, Marsha, Thomas, Samantha M, Burrows, Courtney K, Romero, Irene Gallego, Pavlovic, Bryan J, Kundaje, Anshul, Pritchard, Jonathan K, Gilad, Yoav
Published in Genome research (01.01.2018)
Published in Genome research (01.01.2018)
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Journal Article
Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes
Ward, Michelle C, Banovich, Nicholas E, Sarkar, Abhishek, Stephens, Matthew, Gilad, Yoav
Published in eLife (08.02.2021)
Published in eLife (08.02.2021)
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Journal Article
Anthracyclines induce cardiotoxicity through a shared gene expression response signature
Matthews, E Renee, Johnson, Omar D, Horn, Kandace J, Gutiérrez, José A, Powell, Simon R, Ward, Michelle C
Published in PLoS genetics (28.02.2024)
Published in PLoS genetics (28.02.2024)
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Journal Article
Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions
Findley, Anthony S, Monziani, Alan, Richards, Allison L, Rhodes, Katherine, Ward, Michelle C, Kalita, Cynthia A, Alazizi, Adnan, Pazokitoroudi, Ali, Sankararaman, Sriram, Wen, Xiaoquan, Lanfear, David E, Pique-Regi, Roger, Gilad, Yoav, Luca, Francesca
Published in eLife (14.05.2021)
Published in eLife (14.05.2021)
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Journal Article
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes
Schwalie, Petra C, Ward, Michelle C, Cain, Carolyn E, Faure, Andre J, Gilad, Yoav, Odom, Duncan T, Flicek, Paul
Published in Genome biology (31.12.2013)
Published in Genome biology (31.12.2013)
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Journal Article
Latent Regulatory Potential of Human-Specific Repetitive Elements
Ward, Michelle C., Wilson, Michael D., Barbosa-Morais, Nuno L., Schmidt, Dominic, Stark, Rory, Pan, Qun, Schwalie, Petra C., Menon, Suraj, Lukk, Margus, Watt, Stephen, Thybert, David, Kutter, Claudia, Kirschner, Kristina, Flicek, Paul, Blencowe, Benjamin J., Odom, Duncan T.
Published in Molecular cell (24.01.2013)
Published in Molecular cell (24.01.2013)
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Journal Article
Association of Human iPSC Gene Signatures and X Chromosome Dosage with Two Distinct Cardiac Differentiation Trajectories
D'Antonio-Chronowska, Agnieszka, Donovan, Margaret K.R., Young Greenwald, William W., Nguyen, Jennifer Phuong, Fujita, Kyohei, Hashem, Sherin, Matsui, Hiroko, Soncin, Francesca, Parast, Mana, Ward, Michelle C., Coulet, Florence, Smith, Erin N., Adler, Eric, D'Antonio, Matteo, Frazer, Kelly A.
Published in Stem cell reports (12.11.2019)
Published in Stem cell reports (12.11.2019)
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Journal Article
Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs
Ward, Michelle C, Zhao, Siming, Luo, Kaixuan, Pavlovic, Bryan J, Karimi, Mohammad M, Stephens, Matthew, Gilad, Yoav
Published in eLife (12.04.2018)
Published in eLife (12.04.2018)
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Journal Article
Successful transmission and transcriptional deployment of a human chromosome via mouse male meiosis
Ernst, Christina, Pike, Jeremy, Aitken, Sarah J, Long, Hannah K, Eling, Nils, Stojic, Lovorka, Ward, Michelle C, Connor, Frances, Rayner, Timothy F, Lukk, Margus, Klose, Robert J, Kutter, Claudia, Odom, Duncan T
Published in eLife (18.11.2016)
Published in eLife (18.11.2016)
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Journal Article
Insights into hominid evolution from the gorilla genome sequence
Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Gregory E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Published in Nature (London) (08.03.2012)
Published in Nature (London) (08.03.2012)
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Journal Article
A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics
Gallego Romero, Irene, Pavlovic, Bryan J, Hernando-Herraez, Irene, Zhou, Xiang, Ward, Michelle C, Banovich, Nicholas E, Kagan, Courtney L, Burnett, Jonathan E, Huang, Constance H, Mitrano, Amy, Chavarria, Claudia I, Friedrich Ben-Nun, Inbar, Li, Yingchun, Sabatini, Karen, Leonardo, Trevor R, Parast, Mana, Marques-Bonet, Tomas, Laurent, Louise C, Loring, Jeanne F, Gilad, Yoav
Published in eLife (23.06.2015)
Published in eLife (23.06.2015)
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Journal Article
Deregulated LAP2α expression in cervical cancer associates with aberrant E2F and p53 activities
Ward, Michelle C, van der Watt, Pauline J, Tzoneva, Gannie, Leaner, Virna D
Published in IUBMB life (01.11.2011)
Published in IUBMB life (01.11.2011)
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Journal Article
Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions
Findley, Anthony S, Monziani, Alan, Richards, Allison L, Rhodes, Katie, Ward, Michelle C, Kalita, Cynthia A, Alazizi, Adnan, Pazokitoroudi, Ali, Sankararaman, Sriram, Wen, Xiaoquan, Lanfear, David E, Pique-Regi, Roger, Gilad, Yoav, Luca, Francesca
Published in bioRxiv (31.01.2021)
Published in bioRxiv (31.01.2021)
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