scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses
Wang, Juexin, Ma, Anjun, Chang, Yuzhou, Gong, Jianting, Jiang, Yuexu, Qi, Ren, Wang, Cankun, Fu, Hongjun, Ma, Qin, Xu, Dong
Published in Nature communications (25.03.2021)
Published in Nature communications (25.03.2021)
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A single-cell and spatial RNA-seq database for Alzheimer’s disease (ssREAD)
Wang, Cankun, Acosta, Diana, McNutt, Megan, Bian, Jiang, Ma, Anjun, Fu, Hongjun, Ma, Qin
Published in Nature communications (06.06.2024)
Published in Nature communications (06.06.2024)
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Journal Article
Microglia coordinate cellular interactions during spinal cord repair in mice
Brennan, Faith H., Li, Yang, Wang, Cankun, Ma, Anjun, Guo, Qi, Li, Yi, Pukos, Nicole, Campbell, Warren A., Witcher, Kristina G., Guan, Zhen, Kigerl, Kristina A., Hall, Jodie C. E., Godbout, Jonathan P., Fischer, Andy J., McTigue, Dana M., He, Zhigang, Ma, Qin, Popovich, Phillip G.
Published in Nature communications (14.07.2022)
Published in Nature communications (14.07.2022)
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Single-cell biological network inference using a heterogeneous graph transformer
Ma, Anjun, Wang, Xiaoying, Li, Jingxian, Wang, Cankun, Xiao, Tong, Liu, Yuntao, Cheng, Hao, Wang, Juexin, Li, Yang, Chang, Yuzhou, Li, Jinpu, Wang, Duolin, Jiang, Yuexu, Su, Li, Xin, Gang, Gu, Shaopeng, Li, Zihai, Liu, Bingqiang, Xu, Dong, Ma, Qin
Published in Nature communications (21.02.2023)
Published in Nature communications (21.02.2023)
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LPInsider: a webserver for lncRNA-protein interaction extraction from the literature
Li, Ying, Wei, Lizheng, Wang, Cankun, Zhao, Jianing, Han, Siyu, Zhang, Yu, Du, Wei
Published in BMC bioinformatics (15.04.2022)
Published in BMC bioinformatics (15.04.2022)
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Author Correction: scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses
Wang, Juexin, Ma, Anjun, Chang, Yuzhou, Gong, Jianting, Jiang, Yuexu, Qi, Ren, Wang, Cankun, Fu, Hongjun, Ma, Qin, Xu, Dong
Published in Nature communications (04.05.2022)
Published in Nature communications (04.05.2022)
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IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis
Monier, Brandon, McDermaid, Adam, Wang, Cankun, Zhao, Jing, Miller, Allison, Fennell, Anne, Ma, Qin
Published in PLoS computational biology (01.02.2019)
Published in PLoS computational biology (01.02.2019)
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Using Machine Learning to Measure Relatedness Between Genes: A Multi-Features Model
Wang, Yan, Yang, Sen, Zhao, Jing, Du, Wei, Liang, Yanchun, Wang, Cankun, Zhou, Fengfeng, Tian, Yuan, Ma, Qin
Published in Scientific reports (12.03.2019)
Published in Scientific reports (12.03.2019)
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Impaired Human Cardiac Cell Development due to NOTCH1 Deficiency
Ye, Shiqiao, Wang, Cankun, Xu, Zhaohui, Lin, Hui, Wan, Xiaoping, Yu, Yang, Adhicary, Subhodip, Zhang, Joe Z., Zhou, Yang, Liu, Chun, Alonzo, Matthew, Bi, Jianli, Ramirez-Navarro, Angelina, Deschenes, Isabelle, Ma, Qin, Garg, Vidu, Wu, Joseph C., Zhao, Ming-Tao
Published in Circulation research (20.01.2023)
Published in Circulation research (20.01.2023)
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Wolframin is a novel regulator of tau pathology and neurodegeneration
Chen, Shuo, Acosta, Diana, Li, Liangping, Liang, Jiawen, Chang, Yuzhou, Wang, Cankun, Fitzgerald, Julie, Morrison, Cody, Goulbourne, Chris N., Nakano, Yoshi, Villegas, Nancy C. Hernandez, Venkataraman, Lalitha, Brown, Cris, Serrano, Geidy E., Bell, Erica, Wemlinger, Trina, Wu, Min, Kokiko-Cochran, Olga N., Popovich, Phillip, Flowers, Xena E., Honig, Lawrence S., Vonsattel, Jean Paul, Scharre, Douglas W., Beach, Thomas G., Ma, Qin, Kuret, Jeff, Kõks, Sulev, Urano, Fumihiko, Duff, Karen E., Fu, Hongjun
Published in Acta neuropathologica (01.05.2022)
Published in Acta neuropathologica (01.05.2022)
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Spatially resolved transcriptomics reveals genes associated with the vulnerability of middle temporal gyrus in Alzheimer's disease
Chen, Shuo, Chang, Yuzhou, Li, Liangping, Acosta, Diana, Li, Yang, Guo, Qi, Wang, Cankun, Turkes, Emir, Morrison, Cody, Julian, Dominic, Hester, Mark E, Scharre, Douglas W, Santiskulvong, Chintda, Song, Sarah XueYing, Plummer, Jasmine T, Serrano, Geidy E, Beach, Thomas G, Duff, Karen E, Ma, Qin, Fu, Hongjun
Published in Acta neuropathologica communications (21.12.2022)
Published in Acta neuropathologica communications (21.12.2022)
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De novo Prediction of Moonlighting Proteins Using Multimodal Deep Ensemble Learning
Li, Ying, Zhao, Jianing, Liu, Zhaoqian, Wang, Cankun, Wei, Lizheng, Han, Siyu, Du, Wei
Published in Frontiers in genetics (22.03.2021)
Published in Frontiers in genetics (22.03.2021)
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Research on property and burning behavior of flammable casing for underground coal gasification
Ren, Xiangyi, Wu, Jianjun, Wang, Cankun, Xie, Junfeng, Wang, Jianjun, Liu, Mingtao, Han, Lihong
Published in Heliyon (01.12.2023)
Published in Heliyon (01.12.2023)
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Distinctive patterns of sulfide- and butyrate-metabolizing bacteria after bariatric surgery: potential implications for colorectal cancer risk
Hussan, Hisham, Clinton, Steven K, Grainger, Elizabeth M, Webb, Maxine, Wang, Cankun, Webb, Amy, Needleman, Bradley, Noria, Sabrena, Zhu, Jiangjiang, Choueiry, Fouad, Pietrzak, Maciej, Bailey, Michael T
Published in Gut microbes (01.12.2023)
Published in Gut microbes (01.12.2023)
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DESSO-DB: A web database for sequence and shape motif analyses and identification
Wang, Xiaoying, Wang, Cankun, Li, Lang, Ma, Qin, Ma, Anjun, Liu, Bingqiang
Published in Computational and structural biotechnology journal (01.01.2022)
Published in Computational and structural biotechnology journal (01.01.2022)
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Molecular Regulation of Heme Oxygenase-1 Expression by E2F Transcription Factor 2 in Lung Fibroblast Cells: Relevance to Idiopathic Pulmonary Fibrosis
Ye, Qinmao, Taleb, Sarah J, Wang, Heather, Parinandi, Narasimham L, Kass, Daniel J, Rojas, Mauricio, Wang, Cankun, Ma, Qin, Zhao, Jing, Zhao, Yutong
Published in Biomolecules (Basel, Switzerland) (01.10.2022)
Published in Biomolecules (Basel, Switzerland) (01.10.2022)
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