Healthy human gut phageome
Manrique, Pilar, Bolduc, Benjamin, Walk, Seth T., van der Oost, John, de Vos, Willem M., Young, Mark J.
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (13.09.2016)
Get full text
Journal Article
Microbiota-Derived Indole Metabolites Promote Human and Murine Intestinal Homeostasis through Regulation of Interleukin-10 Receptor
Alexeev, Erica E., Lanis, Jordi M., Kao, Daniel J., Campbell, Eric L., Kelly, Caleb J., Battista, Kayla D., Gerich, Mark E., Jenkins, Brittany R., Walk, Seth T., Kominsky, Douglas J., Colgan, Sean P.
Published in The American journal of pathology (01.05.2018)
Published in The American journal of pathology (01.05.2018)
Get full text
Journal Article
Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species
Luo, Chengwei, Walk, Seth T, Gordon, David M, Feldgarden, Michael, Tiedje, James M, Konstantinidis, Konstantinos T
Published in Proceedings of the National Academy of Sciences - PNAS (26.04.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (26.04.2011)
Get full text
Journal Article
Disruption of the human gut microbiota following Norovirus infection
Nelson, Adam M, Walk, Seth T, Taube, Stefan, Taniuchi, Mami, Houpt, Eric R, Wobus, Christiane E, Young, Vincent B
Published in PloS one (30.10.2012)
Published in PloS one (30.10.2012)
Get full text
Journal Article
Escherichia coli Isolates That Carry vat, fyuA, chuA, and yfcV Efficiently Colonize the Urinary Tract
SPURBECK, Rachel R, DINH, Paul C, WALK, Seth T, STAPLETON, Ann E, HOOTON, Thomas M, NOLAN, Lisa K, KWANG SIK KIM, JOHNSON, James R, MOBLEY, Harry L. T
Published in Infection and Immunity (01.12.2012)
Published in Infection and Immunity (01.12.2012)
Get full text
Journal Article
Cryptic Lineages of the Genus Escherichia
Walk, Seth T, Alm, Elizabeth W, Gordon, David M, Ram, Jeffrey L, Toranzos, Gary A, Tiedje, James M, Whittam, Thomas S
Published in Applied and Environmental Microbiology (01.10.2009)
Published in Applied and Environmental Microbiology (01.10.2009)
Get full text
Journal Article
Gut microbiome dysbiosis drives metabolic dysfunction in Familial dysautonomia
Cheney, Alexandra M, Costello, Stephanann M, Pinkham, Nicholas V, Waldum, Annie, Broadaway, Susan C, Cotrina-Vidal, Maria, Mergy, Marc, Tripet, Brian, Kominsky, Douglas J, Grifka-Walk, Heather M, Kaufmann, Horacio, Norcliffe-Kaufmann, Lucy, Peach, Jesse T, Bothner, Brian, Lefcort, Frances, Copié, Valérie, Walk, Seth T
Published in Nature communications (13.01.2023)
Published in Nature communications (13.01.2023)
Get full text
Journal Article
Fimbrial Profiles Predict Virulence of Uropathogenic Escherichia coli Strains: Contribution of Ygi and Yad Fimbriae
SPURBECK, Rachel R, STAPLETON, Ann E, JOHNSON, James R, WALK, Seth T, HOOTON, Thomas M, MOBLEY, Harry L. T
Published in Infection and Immunity (01.12.2011)
Published in Infection and Immunity (01.12.2011)
Get full text
Journal Article
The Rise and Fall of SARS-CoV-2 Variants and Ongoing Diversification of Omicron
Wiegand, Tanner, Nemudryi, Artem, Nemudraia, Anna, McVey, Aidan, Little, Agusta, Taylor, David N, Walk, Seth T, Wiedenheft, Blake
Published in Viruses (01.09.2022)
Published in Viruses (01.09.2022)
Get full text
Journal Article
Antiviral responses in a Jamaican fruit bat intestinal organoid model of SARS-CoV-2 infection
Hashimi, Marziah, Sebrell, T Andrew, Hedges, Jodi F, Snyder, Deann, Lyon, Katrina N, Byrum, Stephanie D, Mackintosh, Samuel G, Crowley, Dan, Cherne, Michelle D, Skwarchuk, David, Robison, Amanda, Sidar, Barkan, Kunze, Anja, Loveday, Emma K, Taylor, Matthew P, Chang, Connie B, Wilking, James N, Walk, Seth T, Schountz, Tony, Jutila, Mark A, Bimczok, Diane
Published in Nature communications (28.10.2023)
Published in Nature communications (28.10.2023)
Get full text
Journal Article
A Synthetic Hydrogel, VitroGel ® ORGANOID-3, Improves Immune Cell-Epithelial Interactions in a Tissue Chip Co-Culture Model of Human Gastric Organoids and Dendritic Cells
Cherne, Michelle D, Sidar, Barkan, Sebrell, T Andrew, Sanchez, Humberto S, Heaton, Kody, Kassama, Francis J, Roe, Mandi M, Gentry, Andrew B, Chang, Connie B, Walk, Seth T, Jutila, Mark, Wilking, James N, Bimczok, Diane
Published in Frontiers in pharmacology (06.09.2021)
Published in Frontiers in pharmacology (06.09.2021)
Get full text
Journal Article
The systemic inflammatory response to Clostridium difficile infection
Rao, Krishna, Erb-Downward, John R, Walk, Seth T, Micic, Dejan, Falkowski, Nicole, Santhosh, Kavitha, Mogle, Jill A, Ring, Cathrin, Young, Vincent B, Huffnagle, Gary B, Aronoff, David M
Published in PloS one (18.03.2014)
Published in PloS one (18.03.2014)
Get full text
Journal Article
A simplified protocol for deriving sterile, infectious murine Heligmosomoides polygyrus bakeri larvae
Blackwell, Karlin H., Walk, Heather M.G., Peters, L. Robert, Gunlikson, Emily M., Bright, Jack C., Kominsky, Douglas J., Walk, Seth T.
Published in STAR protocols (01.09.2024)
Published in STAR protocols (01.09.2024)
Get full text
Journal Article
Escherichia albertii in wild and domestic birds
Oaks, J Lindsay, Besser, Thomas E, Walk, Seth T, Gordon, David M, Beckmen, Kimberlee B, Burek, Kathy A, Haldorson, Gary J, Bradway, Dan S, Ouellette, Lindsey, Rurangirwa, Fred R, Davis, Margaret A, Dobbin, Greg, Whittam, Thomas S
Published in Emerging infectious diseases (01.04.2010)
Published in Emerging infectious diseases (01.04.2010)
Get full text
Journal Article