Identification of breast cancer associated variants that modulate transcription factor binding
Liu, Yunxian, Walavalkar, Ninad M, Dozmorov, Mikhail G, Rich, Stephen S, Civelek, Mete, Guertin, Michael J
Published in PLoS genetics (28.09.2017)
Published in PLoS genetics (28.09.2017)
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Probing the dynamic distribution of bound states for methylcytosine-binding domains on DNA
Cramer, Jason M, Scarsdale, J Neel, Walavalkar, Ninad M, Buchwald, William A, Ginder, Gordon D, Williams, Jr, David C
Published in The Journal of biological chemistry (17.01.2014)
Published in The Journal of biological chemistry (17.01.2014)
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Unique Features of the Anti-parallel, Heterodimeric Coiled-coil Interaction between Methyl-cytosine Binding Domain 2 (MBD2) Homologues and GATA Zinc Finger Domain Containing 2A (GATAD2A/p66α)
Walavalkar, Ninad M., Gordon, Nathaniel, Williams, David C.
Published in The Journal of biological chemistry (01.02.2013)
Published in The Journal of biological chemistry (01.02.2013)
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Journal Article
p66α—MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2—NuRD complex
Gnanapragasam, Merlin Nithya, Scarsdale, J. Neel, Amaya, Maria L., Webb, Heather D., Desai, Megha A., Walavalkar, Ninad M., Wang, Shou Zhen, Zu Zhu, Sheng, Ginder, Gordon D., Williams, David C., Felsenfeld, Gary
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
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Journal Article
Methylation specific targeting of a chromatin remodeling complex from sponges to humans
Cramer, Jason M., Pohlmann, Deborah, Gomez, Fernando, Mark, Leslie, Kornegay, Benjamin, Hall, Chelsea, Siraliev-Perez, Edhriz, Walavalkar, Ninad M., Sperlazza, M. Jeannette, Bilinovich, Stephanie, Prokop, Jeremy W., Hill, April L., Williams Jr, David C.
Published in Scientific reports (17.01.2017)
Published in Scientific reports (17.01.2017)
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Journal Article
Solution structure and intramolecular exchange of methyl-cytosine binding domain protein 4 (MBD4) on DNA suggests a mechanism to scan for mCpG/TpG mismatches
Walavalkar, Ninad M, Cramer, Jason M, Buchwald, William A, Scarsdale, J Neel, Williams, Jr, David C
Published in Nucleic acids research (02.09.2014)
Published in Nucleic acids research (02.09.2014)
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Kinetic networks identify TWIST2 as a key regulatory node in adipogenesis
Dutta, Arun B, Lank, Daniel S, Przanowska, Roza K, Przanowski, Piotr, Wang, Lixin, Nguyen, Bao, Walavalkar, Ninad M, Duarte, Fabiana M, Guertin, Michael J
Published in Genome research (01.03.2023)
Published in Genome research (01.03.2023)
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An intrinsically disordered region of methyl-CpG binding domain protein 2 (MBD2) recruits the histone deacetylase core of the NuRD complex
Desai, Megha A, Webb, Heather D, Sinanan, Leander M, Scarsdale, J Neel, Walavalkar, Ninad M, Ginder, Gordon D, Williams, Jr, David C
Published in Nucleic acids research (31.03.2015)
Published in Nucleic acids research (31.03.2015)
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Dissecting the structural basis of MEIG1 interaction with PACRG
Li, Wei, Walavalkar, Ninad M., Buchwald, William A., Teves, Maria E., Zhang, Ling, Liu, Hong, Bilinovich, Stephanie, Peterson, Darrell L., Strauss III, Jerome F., Williams Jr, David C., Zhang, Zhibing
Published in Scientific reports (04.01.2016)
Published in Scientific reports (04.01.2016)
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Probing the Dynamic Distribution of Bound States for Methylcytosine-binding Domains on DNAThis work was supported, in whole or in part, by National Institutes of Health Grants R01 GM098624 (to D. C. W.) and R01 DK029902 (to G. D. G.). NMR data were acquired using NMR instrumentation in the Virginia Commonwealth University Massey Cancer Center Structural Biology Core, and surface plasmon resonance data were acquired in the Virginia Commonwealth University Massey Cancer Center Flow Cytometry Core,
Cramer, Jason M., Scarsdale, J. Neel, Walavalkar, Ninad M., Buchwald, William A., Ginder, Gordon D., Williams, David C.
Published in The Journal of biological chemistry (01.01.2014)
Published in The Journal of biological chemistry (01.01.2014)
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Journal Article
p66[alpha]-MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2-NuRD complex
Gnanapragasam, Merlin Nithya, Scarsdale, J Neel, Amaya, Maria L, Webb, Heather D, Desai, Megha A, Walavalkar, Ninad M, Wang, Shou Zhen, Zhu, Sheng Zu, Ginder, Gordon D, Williams, David C
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
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Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
Journal Article
p66α-MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2-NuRD complex
Gnanapragasam, Merlin Nithya, Scarsdale, J. Neel, Amaya, Maria L, Webb, Heather D, Desai, Megha A, Walavalkar, Ninad M, Wang, Shou Zhen, Zu Zhu, Sheng, Ginder, Gordon D, Williams, David C. Jr
Published in Proceedings of the National Academy of Sciences - PNAS (2011)
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Published in Proceedings of the National Academy of Sciences - PNAS (2011)
Journal Article
p66Alpha-MBD2 coiled-coil interaction and recruitment of Mi-2 are critical for globin gene silencing by the MBD2-NuRD complex
Gnanapragasam, Merlin Nithya, Scarsdale, J Neel, Amaya, Maria L, Webb, Heather D, Desai, Megha A, Walavalkar, Ninad M, Wang, Shou Zhen, Zu Zhu, Sheng, Ginder, Gordon D, Williams, Jr, David C
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2011)
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Journal Article