Epigenetic Perturbations by Arg882-Mutated DNMT3A Potentiate Aberrant Stem Cell Gene-Expression Program and Acute Leukemia Development
Lu, Rui, Wang, Ping, Parton, Trevor, Zhou, Yang, Chrysovergis, Kaliopi, Rockowitz, Shira, Chen, Wei-Yi, Abdel-Wahab, Omar, Wade, Paul A., Zheng, Deyou, Wang, Gang Greg
Published in Cancer cell (11.07.2016)
Published in Cancer cell (11.07.2016)
Get full text
Journal Article
An obesity-associated gut microbiome reprograms the intestinal epigenome and leads to altered colonic gene expression
Qin, Yufeng, Roberts, John D, Grimm, Sara A, Lih, Fred B, Deterding, Leesa J, Li, Ruifang, Chrysovergis, Kaliopi, Wade, Paul A
Published in Genome Biology (23.01.2018)
Published in Genome Biology (23.01.2018)
Get full text
Journal Article
Comprehensive structure-function characterization of DNMT3B and DNMT3A reveals distinctive de novo DNA methylation mechanisms
Gao, Linfeng, Emperle, Max, Guo, Yiran, Grimm, Sara A, Ren, Wendan, Adam, Sabrina, Uryu, Hidetaka, Zhang, Zhi-Min, Chen, Dongliang, Yin, Jiekai, Dukatz, Michael, Anteneh, Hiwot, Jurkowska, Renata Z, Lu, Jiuwei, Wang, Yinsheng, Bashtrykov, Pavel, Wade, Paul A, Wang, Gang Greg, Jeltsch, Albert, Song, Jikui
Published in Nature communications (03.07.2020)
Published in Nature communications (03.07.2020)
Get full text
Journal Article
Interaction of the pioneer transcription factor GATA3 with nucleosomes
Tanaka, Hiroki, Takizawa, Yoshimasa, Takaku, Motoki, Kato, Daiki, Kumagawa, Yusuke, Grimm, Sara A, Wade, Paul A, Kurumizaka, Hitoshi
Published in Nature communications (18.08.2020)
Published in Nature communications (18.08.2020)
Get full text
Journal Article
INO80 Facilitates Pluripotency Gene Activation in Embryonic Stem Cell Self-Renewal, Reprogramming, and Blastocyst Development
Wang, Li, Du, Ying, Ward, James M., Shimbo, Takashi, Lackford, Brad, Zheng, Xiaofeng, Miao, Yi-liang, Zhou, Bingying, Han, Leng, Fargo, David C., Jothi, Raja, Williams, Carmen J., Wade, Paul A., Hu, Guang
Published in Cell stem cell (01.05.2014)
Published in Cell stem cell (01.05.2014)
Get full text
Journal Article
Genomic transcription factor binding site selection is edited by the chromatin remodeling factor CHD4
Saotome, Mika, Poduval, Deepak B, Grimm, Sara A, Nagornyuk, Aerica, Gunarathna, Sakuntha, Shimbo, Takashi, Wade, Paul A, Takaku, Motoki
Published in Nucleic acids research (24.04.2024)
Published in Nucleic acids research (24.04.2024)
Get full text
Journal Article
GATA3 zinc finger 2 mutations reprogram the breast cancer transcriptional network
Takaku, Motoki, Grimm, Sara A, Roberts, John D, Chrysovergis, Kaliopi, Bennett, Brian D, Myers, Page, Perera, Lalith, Tucker, Charles J, Perou, Charles M, Wade, Paul A
Published in Nature communications (13.03.2018)
Published in Nature communications (13.03.2018)
Get full text
Journal Article
MBD3 localizes at promoters, gene bodies and enhancers of active genes
Shimbo, Takashi, Du, Ying, Grimm, Sara A, Dhasarathy, Archana, Mav, Deepak, Shah, Ruchir R, Shi, Huidong, Wade, Paul A
Published in PLoS genetics (01.12.2013)
Published in PLoS genetics (01.12.2013)
Get full text
Journal Article
DNMT1 reads heterochromatic H4K20me3 to reinforce LINE-1 DNA methylation
Ren, Wendan, Fan, Huitao, Grimm, Sara A, Kim, Jae Jin, Li, Linhui, Guo, Yiran, Petell, Christopher James, Tan, Xiao-Feng, Zhang, Zhi-Min, Coan, John P, Yin, Jiekai, Kim, Dae In, Gao, Linfeng, Cai, Ling, Khudaverdyan, Nelli, Çetin, Burak, Patel, Dinshaw J, Wang, Yinsheng, Cui, Qiang, Strahl, Brian D, Gozani, Or, Miller, Kyle M, O'Leary, Seán E, Wade, Paul A, Wang, Gang Greg, Song, Jikui
Published in Nature communications (03.05.2021)
Published in Nature communications (03.05.2021)
Get full text
Journal Article
Direct readout of heterochromatic H3K9me3 regulates DNMT1-mediated maintenance DNA methylation
Ren, Wendan, Fan, Huitao, Grimm, Sara A., Guo, Yiran, Kim, Jae Jin, Yin, Jiekai, Li, Linhui, Petell, Christopher J., Tan, Xiao-Feng, Zhang, Zhi-Min, Coan, John P., Gao, Linfeng, Cai, Ling, Detrick, Brittany, Çetin, Burak, Cui, Qiang, Strahl, Brian D., Gozani, Or, Wang, Yinsheng, Miller, Kyle M., O’Leary, Seán E., Wade, Paul A., Patel, Dinshaw J., Wang, Gang Greg, Song, Jikui
Published in Proceedings of the National Academy of Sciences - PNAS (04.08.2020)
Published in Proceedings of the National Academy of Sciences - PNAS (04.08.2020)
Get full text
Journal Article
Caloric restriction remodels the hepatic chromatin landscape and bile acid metabolism by modulating the gut microbiota
Fan, Yun, Qian, Hong, Zhang, Meijia, Tao, Chengzhe, Li, Zhi, Yan, Wenkai, Huang, Yuna, Zhang, Yan, Xu, Qiaoqiao, Wang, Xinru, Wade, Paul A, Xia, Yankai, Qin, Yufeng, Lu, Chuncheng
Published in Genome Biology (30.04.2023)
Published in Genome Biology (30.04.2023)
Get full text
Journal Article
Rif1 promotes a repressive chromatin state to safeguard against endogenous retrovirus activation
Li, Pishun, Wang, Li, Bennett, Brian D, Wang, Jiajia, Li, Jialun, Qin, Yufeng, Takaku, Motoki, Wade, Paul A, Wong, Jiemin, Hu, Guang
Published in Nucleic acids research (15.12.2017)
Published in Nucleic acids research (15.12.2017)
Get full text
Journal Article
Transcriptome and DNA Methylome Analysis in a Mouse Model of Diet-Induced Obesity Predicts Increased Risk of Colorectal Cancer
Li, Ruifang, Grimm, Sara A., Mav, Deepak, Gu, Haiwei, Djukovic, Danijel, Shah, Ruchir, Merrick, B. Alex, Raftery, Daniel, Wade, Paul A.
Published in Cell reports (Cambridge) (16.01.2018)
Published in Cell reports (Cambridge) (16.01.2018)
Get full text
Journal Article
Multiple tissue-specific epigenetic alterations regulate persistent gene expression changes following developmental DES exposure in mouse reproductive tissues
Jefferson, Tanner B., Wang, Tianyuan, Jefferson, Wendy N., Li, Yin, Hamilton, Katherine J., Wade, Paul A., Williams, Carmen J., Korach, Kenneth S.
Published in Epigenetics (31.12.2023)
Published in Epigenetics (31.12.2023)
Get full text
Journal Article