Pedigree-based estimation of human mobile element retrotransposition rates
Feusier, Julie, Watkins, W Scott, Thomas, Jainy, Farrell, Andrew, Witherspoon, David J, Baird, Lisa, Ha, Hongseok, Xing, Jinchuan, Jorde, Lynn B
Published in Genome research (01.10.2019)
Published in Genome research (01.10.2019)
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Journal Article
The mutational dynamics of short tandem repeats in large, multigenerational families
Steely, Cody J, Watkins, W Scott, Baird, Lisa, Jorde, Lynn B
Published in Genome Biology (12.12.2022)
Published in Genome Biology (12.12.2022)
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Journal Article
Two contemporaneous mitogenomes from terminal Pleistocene burials in eastern Beringia
Tackney, Justin C., Potter, Ben A., Raff, Jennifer, Powers, Michael, Watkins, W. Scott, Warner, Derek, Reuther, Joshua D., Irish, Joel D., O’Rourke, Dennis H.
Published in Proceedings of the National Academy of Sciences - PNAS (10.11.2015)
Published in Proceedings of the National Academy of Sciences - PNAS (10.11.2015)
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Journal Article
De novo and recessive forms of congenital heart disease have distinct genetic and phenotypic landscapes
Watkins, W Scott, Hernandez, E Javier, Wesolowski, Sergiusz, Bisgrove, Brent W, Sunderland, Ryan T, Lin, Edwin, Lemmon, Gordon, Demarest, Bradley L, Miller, Thomas A, Bernstein, Daniel, Brueckner, Martina, Chung, Wendy K, Gelb, Bruce D, Goldmuntz, Elizabeth, Newburger, Jane W, Seidman, Christine E, Shen, Yufeng, Yost, H Joseph, Yandell, Mark, Tristani-Firouzi, Martin
Published in Nature communications (17.10.2019)
Published in Nature communications (17.10.2019)
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Journal Article
TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data
Goubert, Clément, Thomas, Jainy, Payer, Lindsay M, Kidd, Jeffrey M, Feusier, Julie, Watkins, W Scott, Burns, Kathleen H, Jorde, Lynn B, Feschotte, Cédric
Published in Nucleic acids research (06.04.2020)
Published in Nucleic acids research (06.04.2020)
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Journal Article
Clinical and biochemical function of polymorphic NR0B1 GGAA-microsatellites in Ewing sarcoma: a report from the Children's Oncology Group
Monument, Michael J, Johnson, Kirsten M, McIlvaine, Elizabeth, Abegglen, Lisa, Watkins, W Scott, Jorde, Lynn B, Womer, Richard B, Beeler, Natalie, Monovich, Laura, Lawlor, Elizabeth R, Bridge, Julia A, Schiffman, Joshua D, Krailo, Mark D, Randall, R Lor, Lessnick, Stephen L
Published in PloS one (05.08.2014)
Published in PloS one (05.08.2014)
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Journal Article
Microsatellites as EWS/FLI response elements in Ewing's sarcoma
Gangwal, Kunal, Sankar, Savita, Hollenhorst, Peter C, Kinsey, Michelle, Haroldsen, Stephen C, Shah, Atul A, Boucher, Kenneth M, Watkins, W. Scott, Jorde, Lynn B, Graves, Barbara J, Lessnick, Stephen L
Published in Proceedings of the National Academy of Sciences - PNAS (22.07.2008)
Published in Proceedings of the National Academy of Sciences - PNAS (22.07.2008)
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Journal Article
Maximum-likelihood estimation of recent shared ancestry (ERSA)
Huff, Chad D, Witherspoon, David J, Simonson, Tatum S, Xing, Jinchuan, Watkins, W Scott, Zhang, Yuhua, Tuohy, Therese M, Neklason, Deborah W, Burt, Randall W, Guthery, Stephen L, Woodward, Scott R, Jorde, Lynn B
Published in Genome research (01.05.2011)
Published in Genome research (01.05.2011)
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Journal Article
Genomic analysis of natural selection and phenotypic variation in high-altitude mongolians
Xing, Jinchuan, Wuren, Tana, Simonson, Tatum S, Watkins, W Scott, Witherspoon, David J, Wu, Wilfred, Qin, Ga, Huff, Chad D, Jorde, Lynn B, Ge, Ri-Li
Published in PLoS genetics (01.07.2013)
Published in PLoS genetics (01.07.2013)
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Journal Article
Extremely low-coverage whole genome sequencing in South Asians captures population genomics information
Rustagi, Navin, Zhou, Anbo, Watkins, W Scott, Gedvilaite, Erika, Wang, Shuoguo, Ramesh, Naveen, Muzny, Donna, Gibbs, Richard A, Jorde, Lynn B, Yu, Fuli, Xing, Jinchuan
Published in BMC genomics (22.05.2017)
Published in BMC genomics (22.05.2017)
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Journal Article
Mobile element scanning (ME-Scan) by targeted high-throughput sequencing
Witherspoon, David J, Xing, Jinchuan, Zhang, Yuhua, Watkins, W Scott, Batzer, Mark A, Jorde, Lynn B
Published in BMC genomics (30.06.2010)
Published in BMC genomics (30.06.2010)
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Journal Article
Pharmacogenomics of 17-alpha hydroxyprogesterone caproate for recurrent preterm birth prevention
Manuck, Tracy A., MD, Watkins, W. Scott, MS, Moore, Barry, MS, Esplin, M. Sean, MD, Varner, Michael W., MD, Jackson, G. Marc, MD, Yandell, Mark, PhD, Jorde, Lynn, PhD
Published in American journal of obstetrics and gynecology (01.04.2014)
Published in American journal of obstetrics and gynecology (01.04.2014)
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Journal Article
Genetic diversity in India and the inference of Eurasian population expansion
Xing, Jinchuan, Watkins, W Scott, Hu, Ya, Huff, Chad D, Sabo, Aniko, Muzny, Donna M, Bamshad, Michael J, Gibbs, Richard A, Jorde, Lynn B, Yu, Fuli
Published in Genome biology (24.11.2010)
Published in Genome biology (24.11.2010)
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Journal Article
Discovery of rare, diagnostic AluYb8/9 elements in diverse human populations
Feusier, Julie, Witherspoon, David J, Scott Watkins, W, Goubert, Clñment, Sasani, Thomas A, Jorde, Lynn B
Published in Mobile DNA (27.07.2017)
Published in Mobile DNA (27.07.2017)
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Journal Article
Toward a more uniform sampling of human genetic diversity: A survey of worldwide populations by high-density genotyping
Xing, Jinchuan, Watkins, W. Scott, Shlien, Adam, Walker, Erin, Huff, Chad D., Witherspoon, David J., Zhang, Yuhua, Simonson, Tatum S., Weiss, Robert B., Schiffman, Joshua D., Malkin, David, Woodward, Scott R., Jorde, Lynn B.
Published in Genomics (San Diego, Calif.) (01.10.2010)
Published in Genomics (San Diego, Calif.) (01.10.2010)
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Journal Article
Targeted Gene Sequencing in Children with Crohn's Disease and Their Parents: Implications for Missing Heritability
Chen, Jiun-Sheng, Hu, Fulan, Kugathasan, Subra, Jorde, Lynn B, Nix, David, Rutherford, Ann, Denson, Lee, Watkins, W Scott, Prahalad, Sampath, Huff, Chad, Guthery, Stephen L
Published in G3 : genes - genomes - genetics (01.09.2018)
Published in G3 : genes - genomes - genetics (01.09.2018)
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Journal Article
Common Variation in Cytoskeletal Genes is Associated with Conotruncal Heart Defects
Musfee, Fadi I, Agopian, A J, Goldmuntz, Elizabeth, Hakonarson, Hakon, Morrow, Bernice E, Taylor, Deanne M, Tristani-Firouzi, Martin, Watkins, W Scott, Yandell, Mark, Mitchell, Laura E
Published in Genes (27.04.2021)
Published in Genes (27.04.2021)
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Journal Article
Alu repeats increase local recombination rates
Witherspoon, David J, Watkins, W Scott, Zhang, Yuhua, Xing, Jinchuan, Tolpinrud, Whitney L, Hedges, Dale J, Batzer, Mark A, Jorde, Lynn B
Published in BMC genomics (16.11.2009)
Published in BMC genomics (16.11.2009)
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Journal Article
A Strong Signature of Balancing Selection in the 5′ cis-Regulatory Region of CCR5
Bamshad, Michael J., Mummidi, Srinivas, Gonzalez, Enrique, Ahuja, Seema S., Dunn, Diane M., Watkins, W. Scott, Wooding, Stephen, Stone, Anne C., Jorde, Lynn B., Weiss, Robert B., Ahuja, Sunil K.
Published in Proceedings of the National Academy of Sciences - PNAS (06.08.2002)
Published in Proceedings of the National Academy of Sciences - PNAS (06.08.2002)
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Journal Article