COVID-19 and Cancer: Current Challenges and Perspectives
Bakouny, Ziad, Hawley, Jessica E., Choueiri, Toni K., Peters, Solange, Rini, Brian I., Warner, Jeremy L., Painter, Corrie A.
Published in Cancer Cell (09.11.2020)
Published in Cancer Cell (09.11.2020)
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Use of Natural Language Processing to Extract Clinical Cancer Phenotypes from Electronic Medical Records
Savova, Guergana K, Danciu, Ioana, Alamudun, Folami, Miller, Timothy, Lin, Chen, Bitterman, Danielle S, Tourassi, Georgia, Warner, Jeremy L
Published in Cancer research (Chicago, Ill.) (01.11.2019)
Published in Cancer research (Chicago, Ill.) (01.11.2019)
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Combining billing codes, clinical notes, and medications from electronic health records provides superior phenotyping performance
Wei, Wei-Qi, Teixeira, Pedro L, Mo, Huan, Cronin, Robert M, Warner, Jeremy L, Denny, Joshua C
Published in Journal of the American Medical Informatics Association : JAMIA (01.04.2016)
Published in Journal of the American Medical Informatics Association : JAMIA (01.04.2016)
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Using topic modeling via non-negative matrix factorization to identify relationships between genetic variants and disease phenotypes: A case study of Lipoprotein(a) (LPA)
Zhao, Juan, Feng, QiPing, Wu, Patrick, Warner, Jeremy L, Denny, Joshua C, Wei, Wei-Qi
Published in PloS one (13.02.2019)
Published in PloS one (13.02.2019)
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Optimizing word embeddings for small datasets: a case study on patient portal messages from breast cancer patients
Song, Qingyuan, Ni, Congning, Warner, Jeremy L., Chen, Qingxia, Song, Lijun, Rosenbloom, S. Trent, Malin, Bradley A., Yin, Zhijun
Published in Scientific reports (12.07.2024)
Published in Scientific reports (12.07.2024)
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Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC)
Horak, Peter, Griffith, Malachi, Danos, Arpad M., Pitel, Beth A., Madhavan, Subha, Liu, Xuelu, Chow, Cynthia, Williams, Heather, Carmody, Leigh, Barrow-Laing, Lisa, Rieke, Damian, Kreutzfeldt, Simon, Stenzinger, Albrecht, Tamborero, David, Benary, Manuela, Rajagopal, Padma Sheila, Ida, Cristiane M., Lesmana, Harry, Satgunaseelan, Laveniya, Merker, Jason D., Tolstorukov, Michael Y., Campregher, Paulo Vidal, Warner, Jeremy L., Rao, Shruti, Natesan, Maya, Shen, Haolin, Venstrom, Jeffrey, Roy, Somak, Tao, Kayoko, Kanagal-Shamanna, Rashmi, Xu, Xinjie, Ritter, Deborah I., Pagel, Kym, Krysiak, Kilannin, Dubuc, Adrian, Akkari, Yassmine M., Li, Xuan Shirley, Lee, Jennifer, King, Ian, Raca, Gordana, Wagner, Alex H., Li, Marylin M., Plon, Sharon E., Kulkarni, Shashikant, Griffith, Obi L., Chakravarty, Debyani, Sonkin, Dmitriy
Published in Genetics in medicine (01.09.2022)
Published in Genetics in medicine (01.09.2022)
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Evolving patterns in systemic treatment utilization and survival among older patients with advanced cutaneous melanoma
Hong, Yoon Duk, Enewold, Lindsey, Sharon, Elad, Warner, Jeremy L., Davidoff, Amy J., Zeruto, Chris, Mariotto, Angela B.
Published in Cancer medicine (Malden, MA) (01.08.2024)
Published in Cancer medicine (Malden, MA) (01.08.2024)
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Delivering Cancer Care During the COVID-19 Pandemic: Recommendations and Lessons Learned From ASCO Global Webinars
Jazieh, Abdul Rahman, Chan, Stephen L, Curigliano, Giuseppe, Dickson, Natalie, Eaton, Vanessa, Garcia-Foncillas, Jesus, Gilmore, Terry, Horn, Leora, Kerr, David J, Lee, Jeeyun, Mathias, Clarissa, Nogueira-Rodrigues, Angélica, Pierce, Lori, Rogado, Alvaro, Schilsky, Richard L, Soria, Jean-Charles, Warner, Jeremy L, Yoshida, Kazuhiro
Published in JCO global oncology (01.09.2020)
Published in JCO global oncology (01.09.2020)
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Burden of AML, 1990-2019: Estimates From the Global Burden of Disease Study
Jani, Chinmay T., Ahmed, Alaaeldin, Singh, Harpreet, Mouchati, Christian, Al Omari, Omar, Bhatt, Padmanabh S., Sharma, Rajesh, Farooq, Minaam, Liu, Weitao, Shalhoub, Joseph, Marshall, Dominic, Salciccioli, Justin D., Warner, Jeremy L., Lam, Prudence
Published in JCO global oncology (01.09.2023)
Published in JCO global oncology (01.09.2023)
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Inferring gender from first names: Comparing the accuracy of Genderize, Gender API, and the gender R package on authors of diverse nationality
VanHelene, Alexander D, Khatri, Ishaani, Hilton, C Beau, Mishra, Sanjay, Gamsiz Uzun, Ece D, Warner, Jeremy L
Published in PLOS digital health (01.10.2024)
Published in PLOS digital health (01.10.2024)
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SEETrials: Leveraging large language models for safety and efficacy extraction in oncology clinical trials
Lee, Kyeryoung, Paek, Hunki, Huang, Liang-Chin, Hilton, C Beau, Datta, Surabhi, Higashi, Josh, Ofoegbu, Nneka, Wang, Jingqi, Rubinstein, Samuel M., Cowan, Andrew J., Kwok, Mary, Warner, Jeremy L., Xu, Hua, Wang, Xiaoyan
Published in Informatics in medicine unlocked (2024)
Published in Informatics in medicine unlocked (2024)
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Development of a bayesian toxo-equivalence model between docetaxel and paclitaxel
Sigworth, Elizabeth A., Rubinstein, Samuel M., Chaugai, Sandip, Rivera, Donna R., Walker, Philip D., Chen, Qingxia, Warner, Jeremy L.
Published in iScience (15.04.2022)
Published in iScience (15.04.2022)
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COVID-19 Vaccine Among Actively-Treated People With Cancer: A Glimpse Into the Known Unknowns?
Thakkar, Astha, Mishra, Sanjay, Warner, Jeremy L
Published in JNCI : Journal of the National Cancer Institute (07.02.2022)
Published in JNCI : Journal of the National Cancer Institute (07.02.2022)
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External phenome analysis enables a rational federated query strategy to detect changing rates of treatment-related complications associated with multiple myeloma
Warner, Jeremy L, Alterovitz, Gil, Bodio, Kelly, Joyce, Robin M
Published in Journal of the American Medical Informatics Association : JAMIA (01.07.2013)
Published in Journal of the American Medical Informatics Association : JAMIA (01.07.2013)
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Systematic review of infectious events with the Bruton tyrosine kinase inhibitor ibrutinib in the treatment of hematologic malignancies
Tillman, Benjamin F., Pauff, James M., Satyanarayana, Gowri, Talbott, Mahsa, Warner, Jeremy L.
Published in European journal of haematology (01.04.2018)
Published in European journal of haematology (01.04.2018)
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Reversal of Medical Practices
Warner, Jeremy L., MD, MS, Yang, Peter, MD, Alterovitz, Gil, PhD
Published in Mayo Clinic proceedings (01.10.2013)
Published in Mayo Clinic proceedings (01.10.2013)
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Introducing a Comprehensive Score of Systemic Anticancer Treatment Relevance
Zack, Travis, Warner, Jeremy L
Published in Studies in health technology and informatics (25.01.2024)
Published in Studies in health technology and informatics (25.01.2024)
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