Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing
Yang, Xinping, Coulombe-Huntington, Jasmin, Kang, Shuli, Sheynkman, Gloria M., Hao, Tong, Richardson, Aaron, Sun, Song, Yang, Fan, Shen, Yun A., Murray, Ryan R., Spirohn, Kerstin, Begg, Bridget E., Duran-Frigola, Miquel, MacWilliams, Andrew, Pevzner, Samuel J., Zhong, Quan, Wanamaker, Shelly A., Tam, Stanley, Ghamsari, Lila, Sahni, Nidhi, Yi, Song, Rodriguez, Maria D., Balcha, Dawit, Tan, Guihong, Costanzo, Michael, Andrews, Brenda, Boone, Charles, Zhou, Xianghong J., Salehi-Ashtiani, Kourosh, Charloteaux, Benoit, Chen, Alyce A., Calderwood, Michael A., Aloy, Patrick, Roth, Frederick P., Hill, David E., Iakoucheva, Lilia M., Xia, Yu, Vidal, Marc
Published in Cell (11.02.2016)
Published in Cell (11.02.2016)
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A Proteome-Scale Map of the Human Interactome Network
Rolland, Thomas, Taşan, Murat, Charloteaux, Benoit, Pevzner, Samuel J., Zhong, Quan, Sahni, Nidhi, Yi, Song, Lemmens, Irma, Fontanillo, Celia, Mosca, Roberto, Kamburov, Atanas, Ghiassian, Susan D., Yang, Xinping, Ghamsari, Lila, Balcha, Dawit, Begg, Bridget E., Braun, Pascal, Brehme, Marc, Broly, Martin P., Carvunis, Anne-Ruxandra, Convery-Zupan, Dan, Corominas, Roser, Coulombe-Huntington, Jasmin, Dann, Elizabeth, Dreze, Matija, Dricot, Amélie, Fan, Changyu, Franzosa, Eric, Gebreab, Fana, Gutierrez, Bryan J., Hardy, Madeleine F., Jin, Mike, Kang, Shuli, Kiros, Ruth, Lin, Guan Ning, Luck, Katja, MacWilliams, Andrew, Menche, Jörg, Murray, Ryan R., Palagi, Alexandre, Poulin, Matthew M., Rambout, Xavier, Rasla, John, Reichert, Patrick, Romero, Viviana, Ruyssinck, Elien, Sahalie, Julie M., Scholz, Annemarie, Shah, Akash A., Sharma, Amitabh, Shen, Yun, Spirohn, Kerstin, Tam, Stanley, Tejeda, Alexander O., Wanamaker, Shelly A., Twizere, Jean-Claude, Vega, Kerwin, Walsh, Jennifer, Cusick, Michael E., Xia, Yu, Barabási, Albert-László, Iakoucheva, Lilia M., Aloy, Patrick, De Las Rivas, Javier, Tavernier, Jan, Calderwood, Michael A., Hill, David E., Hao, Tong, Roth, Frederick P., Vidal, Marc
Published in Cell (20.11.2014)
Published in Cell (20.11.2014)
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Author Correction: Uncovering mechanisms of global ocean change effects on the Dungeness crab (Cancer magister) through metabolomics analysis
Wanamaker, Shelly A, McElhany, Paul, Maher, Michael, Perez, Danielle, Busch, D Shallin, Nichols, Krista M
Published in Scientific reports (05.04.2023)
Published in Scientific reports (05.04.2023)
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Correction: Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc
Wanamaker, Shelly A, Mitchell, Kaitlyn R, Thompson, Rhonda Elliott, Eudeline, Benoit, Vadopalas, Brent, Timmins-Schiffman, Emma B, Roberts, Steven B
Published in BMC genomics (06.04.2023)
Published in BMC genomics (06.04.2023)
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Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism
Corominas, Roser, Yang, Xinping, Lin, Guan Ning, Kang, Shuli, Shen, Yun, Ghamsari, Lila, Broly, Martin, Rodriguez, Maria, Tam, Stanley, Wanamaker, Shelly A, Fan, Changyu, Yi, Song, Tasan, Murat, Lemmens, Irma, Kuang, Xingyan, Zhao, Nan, Malhotra, Dheeraj, Michaelson, Jacob J, Vacic, Vladimir, Calderwood, Michael A, Roth, Frederick P, Tavernier, Jan, Horvath, Steve, Salehi-Ashtiani, Kourosh, Korkin, Dmitry, Sebat, Jonathan, Hill, David E, Hao, Tong, Vidal, Marc, Iakoucheva, Lilia M
Published in Nature communications (11.04.2014)
Published in Nature communications (11.04.2014)
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Uncovering mechanisms of global ocean change effects on the Dungeness crab (Cancer magister) through metabolomics analysis
Wanamaker, Shelly A, McElhany, Paul, Maher, Michael, Perez, Danielle, Busch, D Shallin, Nichols, Krista M
Published in Scientific reports (24.07.2019)
Published in Scientific reports (24.07.2019)
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Author Correction: PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants
Willige, Björn C, Zander, Mark, Yoo, Chan Yul, Phan, Amy, Garza, Renee M, Wanamaker, Shelly A, He, Yupeng, Nery, Joseph R, Chen, Huaming, Chen, Meng, Ecker, Joseph R, Chory, Joanne
Published in Nature genetics (01.02.2023)
Published in Nature genetics (01.02.2023)
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Author Correction: CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping
Wanamaker, Shelly A, Garza, Renee M, MacWilliams, Andrew, Nery, Joseph R, Bartlett, Anna, Castanon, Rosa, Goubil, Adeline, Feeney, Joseph, O'Malley, Ronan, Huang, Shao-Shan C, Zhang, Zhuzhu Z, Galli, Mary, Ecker, Joseph R
Published in Nature methods (01.03.2023)
Published in Nature methods (01.03.2023)
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Author Correction: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism
Corominas, Roser, Yang, Xinping, Lin, Guan Ning, Kang, Shuli, Shen, Yun, Ghamsari, Lila, Broly, Martin, Rodriguez, Maria, Tam, Stanley, Wanamaker, Shelly A, Fan, Changyu, Yi, Song, Tasan, Murat, Lemmens, Irma, Kuang, Xingyan, Zhao, Nan, Malhotra, Dheeraj, Michaelson, Jacob J, Vacic, Vladimir, Calderwood, Michael A, Roth, Frederick P, Tavernier, Jan, Horvath, Steve, Salehi-Ashtiani, Kourosh, Korkin, Dmitry, Sebat, Jonathan, Hill, David E, Hao, Tong, Vidal, Marc, Iakoucheva, Lilia M
Published in Nature communications (02.02.2023)
Published in Nature communications (02.02.2023)
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Temporal proteomic profiling reveals insight into critical developmental processes and temperature-influenced physiological response differences in a bivalve mollusc
Wanamaker, Shelly A, Mitchell, Kaitlyn R, Thompson, Rhonda Elliott, Eudeline, Benoit, Vadopalas, Brent, Timmins-Schiffman, Emma B, Roberts, Steven B
Published in BMC genomics (19.10.2020)
Published in BMC genomics (19.10.2020)
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PHYTOCHROME-INTERACTING FACTORs trigger environmentally responsive chromatin dynamics in plants
Willige, Björn C, Zander, Mark, Yoo, Chan Yul, Phan, Amy, Garza, Renee M, Wanamaker, Shelly A, He, Yupeng, Nery, Joseph R, Chen, Huaming, Chen, Meng, Ecker, Joseph R, Chory, Joanne
Published in Nature genetics (01.07.2021)
Published in Nature genetics (01.07.2021)
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CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping
Wanamaker, Shelly A, Garza, Renee M, MacWilliams, Andrew, Nery, Joseph R, Bartlett, Anna, Castanon, Rosa, Goubil, Adeline, Feeney, Joseph, O'Malley, Ronan, Huang, Shao-Shan C, Zhang, Zhuzhu Z, Galli, Mary, Ecker, Joseph R
Published in Nature methods (01.08.2017)
Published in Nature methods (01.08.2017)
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Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins
ROZENBLATT-ROSEN, Orit, DEO, Rahul C, PEVZNER, Samuel J, ABDERAZZAQ, Fieda, BYRDSON, Danielle, CARVUNIS, Anne-Ruxandra, CHEN, Alyce A, JINGWEI CHENG, CORRELL, Mick, DUARTE, Melissa, CHANGYU FAN, FELTKAMP, Mariet C, PADI, Megha, FICARROL, Scott B, FRANCHI, Rachel, GARG, Brijesh K, GULBAHCE, Natali, TONG HAO, HOLTHAUS, Amy M, JAMES, Robert, KORKHIN, Anna, LITOVCHICK, Larisa, MAR, Jessica C, ADELMANT, Guillaume, PAK, Theodore R, RABELLO, Sabrina, RUBIO, Renee, YUN SHEN, SINGH, Saurav, SPANGLE, Jennifer M, TASAN, Murat, WANAMAKER, Shelly, WEBBER, James T, ROECKLEIN-CANFIELD, Jennifer, CALDERWOOD, Michael A, JOHANNSEN, Eric, BARABASI, Albert-László, BEROUKHIM, Rameen, KIEFF, Elliott, CUSICK, Michael E, HILL, David E, MÜNGER, Karl, MARTO, Jarrod A, QUACKENBUSH, John, ROTH, Frederick P, ROLLAND, Thomas, DECAPRIO, James A, VIDAL, Marc, GRACE, Miranda, DRICOT, Amélie, ASKENAZI, Manor, TAVARES, Maria
Published in Nature (London) (26.07.2012)
Published in Nature (London) (26.07.2012)
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Interpreting cancer genomes using systematic host perturbations by tumour virus proteins
Rozenblatt-Rosen, Orit, Deo, Rahul C., Padi, Megha, Adelmant, Guillaume, Calderwood, Michael A., Rolland, Thomas, Grace, Miranda, Dricot, Amélie, Askenazi, Manor, Tavares, Maria, Pevzner, Sam, Abderazzaq, Fieda, Byrdsong, Danielle, Carvunis, Anne-Ruxandra, Chen, Alyce A., Cheng, Jingwei, Correll, Mick, Duarte, Melissa, Fan, Changyu, Feltkamp, Mariet C., Ficarro, Scott B., Franchi, Rachel, Garg, Brijesh K., Gulbahce, Natali, Hao, Tong, Holthaus, Amy M., James, Robert, Korkhin, Anna, Litovchick, Larisa, Mar, Jessica C., Pak, Theodore R., Rabello, Sabrina, Rubio, Renee, Shen, Yun, Singh, Saurav, Spangle, Jennifer M., Tasan, Murat, Wanamaker, Shelly, Webber, James T., Roecklein-Canfield, Jennifer, Johannsen, Eric, Barabási, Albert-László, Beroukhim, Rameen, Kieff, Elliott, Cusick, Michael E., Hill, David E., Münger, Karl, Marto, Jarrod A., Quackenbush, John, Roth, Frederick P., DeCaprio, James A., Vidal, Marc
Published in Nature (London) (26.07.2012)
Published in Nature (London) (26.07.2012)
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