The Landscape of Somatic Genetic Alterations in Breast Cancers From ATM Germline Mutation Carriers
Weigelt, Britta, Bi, Rui, Kumar, Rahul, Blecua, Pedro, Mandelker, Diana L, Geyer, Felipe C, Pareja, Fresia, James, Paul A, Couch, Fergus J, Eccles, Diana M, Blows, Fiona, Pharoah, Paul, Li, Anqi, Selenica, Pier, Lim, Raymond S, Jayakumaran, Gowtham, Waddell, Nic, Shen, Ronglai, Norton, Larry, Wen, Hannah Y, Powell, Simon N, Riaz, Nadeem, Robson, Mark E, Reis-Filho, Jorge S, Chenevix-Trench, Georgia
Published in JNCI : Journal of the National Cancer Institute (01.09.2018)
Published in JNCI : Journal of the National Cancer Institute (01.09.2018)
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Journal Article
Genome‐wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT‐ROBO, ITGA2 and MET signaling
Nones, Katia, Waddell, Nic, Song, Sarah, Patch, Ann‐Marie, Miller, David, Johns, Amber, Wu, Jianmin, Kassahn, Karin S., Wood, David, Bailey, Peter, Fink, Lynn, Manning, Suzanne, Christ, Angelika N., Nourse, Craig, Kazakoff, Stephen, Taylor, Darrin, Leonard, Conrad, Chang, David K., Jones, Marc D., Thomas, Michelle, Watson, Clare, Pinese, Mark, Cowley, Mark, Rooman, Ilse, Pajic, Marina, Butturini, Giovanni, Malpaga, Anna, Corbo, Vincenzo, Crippa, Stefano, Falconi, Massimo, Zamboni, Giuseppe, Castelli, Paola, Lawlor, Rita T., Gill, Anthony J., Scarpa, Aldo, Pearson, John V., Biankin, Andrew V., Grimmond, Sean M.
Published in International journal of cancer (01.09.2014)
Published in International journal of cancer (01.09.2014)
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Journal Article
miR-139-5p is a regulator of metastatic pathways in breast cancer
Krishnan, Keerthana, Steptoe, Anita L, Martin, Hilary C, Pattabiraman, Diwakar R, Nones, Katia, Waddell, Nic, Mariasegaram, Mythily, Simpson, Peter T, Lakhani, Sunil R, Vlassov, Alexander, Grimmond, Sean M, Cloonan, Nicole
Published in RNA (Cambridge) (01.12.2013)
Published in RNA (Cambridge) (01.12.2013)
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Journal Article
MicroRNA-182-5p targets a network of genes involved in DNA repair
Krishnan, Keerthana, Steptoe, Anita L, Martin, Hilary C, Wani, Shivangi, Nones, Katia, Waddell, Nic, Mariasegaram, Mythily, Simpson, Peter T, Lakhani, Sunil R, Gabrielli, Brian, Vlassov, Alexander, Cloonan, Nicole, Grimmond, Sean M
Published in RNA (Cambridge) (01.02.2013)
Published in RNA (Cambridge) (01.02.2013)
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Journal Article
Type I Interferons Suppress Anti-parasitic Immunity and Can Be Targeted to Improve Treatment of Visceral Leishmaniasis
Kumar, Rajiv, Bunn, Patrick T., Singh, Siddharth Sankar, Ng, Susanna S., Montes de Oca, Marcela, De Labastida Rivera, Fabian, Chauhan, Shashi Bhushan, Singh, Neetu, Faleiro, Rebecca J., Edwards, Chelsea L., Frame, Teija C.M., Sheel, Meru, Austin, Rebecca J., Lane, Steven W., Bald, Tobias, Smyth, Mark J., Hill, Geoffrey.R., Best, Shannon E., Haque, Ashraful, Corvino, Dillon, Waddell, Nic, Koufariotis, Lambross, Mukhopadhay, Pamela, Rai, Madhukar, Chakravarty, Jaya, Singh, Om Prakash, Sacks, David, Nylen, Susanne, Uzonna, Jude, Sundar, Shyam, Engwerda, Christian R.
Published in Cell reports (Cambridge) (25.02.2020)
Published in Cell reports (Cambridge) (25.02.2020)
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Journal Article
qpure: A tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles
Song, Sarah, Nones, Katia, Miller, David, Harliwong, Ivon, Kassahn, Karin S, Pinese, Mark, Pajic, Marina, Gill, Anthony J, Johns, Amber L, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Newell, Felicity, Cowley, Mark J, Wu, Jianmin, Wilson, Peter, Fink, Lynn, Biankin, Andrew V, Waddell, Nic, Grimmond, Sean M, Pearson, John V
Published in PloS one (25.09.2012)
Published in PloS one (25.09.2012)
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Journal Article
Aberrant expression of E-cadherin in lobular carcinomas of the breast
Da Silva, Leonard, Parry, Suzanne, Reid, Lynne, Keith, Patricia, Waddell, Nic, Kossai, Myriam, Clarke, Catherine, Lakhani, Sunil R, Simpson, Peter T
Published in The American journal of surgical pathology (01.05.2008)
Published in The American journal of surgical pathology (01.05.2008)
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Journal Article
Next-Generation Sequencing of Endobronchial Ultrasound Transbronchial Needle Aspiration Specimens in Lung Cancer
Fielding, David, Dalley, Andrew J, Bashirzadeh, Farzad, Singh, Mahendra, Nandakumar, Lakshmy, McCart Reed, Amy E, Black, Debra, Kazakoff, Stephen, Nones, Katia, Pearson, John, Waddell, Nic, Lakhani, Sunil R, Simpson, Peter T
Published in American journal of respiratory and critical care medicine (01.08.2017)
Published in American journal of respiratory and critical care medicine (01.08.2017)
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Journal Article
Clinical and Pathologic Features of Familial Pancreatic Cancer
HUMPHRIS, Jeremy L, JOHNS, Amber L, SCOTT MEAD, R, GILL, Anthony J, SAMRA, Jaswinder S, KENCH, James G, MUSGROVE, Elizabeth A, TUCKER, Katherine M, SPIGELMAN, Allan D, WADDELL, Nic, GRIMMOND, Sean M, BIANKIN, Andrew V, SIMPSON, Skye H, COWLEY, Mark J, PAJIC, Marina, CHANG, David K, NAGRIAL, Adnan M, CHIN, Venessa T, CHANTRILL, Lorraine A, PINESE, Mark
Published in Cancer (01.12.2014)
Published in Cancer (01.12.2014)
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Journal Article
HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer
Da Silva, Leonard, Simpson, Peter T, Smart, Chanel E, Cocciardi, Sibylle, Waddell, Nic, Lane, Annette, Morrison, Brian J, Vargas, Ana Cristina, Healey, Sue, Beesley, Jonathan, Pakkiri, Pria, Parry, Suzanne, Kurniawan, Nyoman, Reid, Lynne, Keith, Patricia, Faria, Paulo, Pereira, Emilio, Skalova, Alena, Bilous, Michael, Balleine, Rosemary L, Do, Hongdo, Dobrovic, Alexander, Fox, Stephen, Franco, Marcello, Reynolds, Brent, Khanna, Kum Kum, Cummings, Margaret, Chenevix-Trench, Georgia, Lakhani, Sunil R
Published in Breast cancer research : BCR (01.01.2010)
Published in Breast cancer research : BCR (01.01.2010)
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Journal Article
Comparative microRNA profiling of sporadic and BRCA1 associated basal-like breast cancers
Yan, Max, Shield-Artin, Kristy, Byrne, David, Deb, Siddhartha, Waddell, Nic, Haviv, Izhak, Fox, Stephen B
Published in BMC cancer (08.07.2015)
Published in BMC cancer (08.07.2015)
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Journal Article
Mutation of ERBB2 Provides a Novel Alternative Mechanism for the Ubiquitous Activation of RAS-MAPK in Ovarian Serous Low Malignant Potential Tumors
Anglesio, Michael S, Arnold, Jeremy M, George, Joshy, Tinker, Anna V, Tothill, Richard, Waddell, Nic, Simms, Lisa, Locandro, Bianca, Fereday, Sian, Traficante, Nadia, Russell, Peter, Sharma, Raghwa, Birrer, Michael J, deFazio, Anna, Chenevix-Trench, Georgia, Bowtell, David D L
Published in Molecular cancer research (01.11.2008)
Published in Molecular cancer research (01.11.2008)
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Journal Article
Using the MCF10A/MCF10CA1a Breast Cancer Progression Cell Line Model to Investigate the Effect of Active, Mutant Forms of EGFR in Breast Cancer Development and Treatment Using Gefitinib
Bessette, Darrell C, Tilch, Erik, Seidens, Tatjana, Quinn, Michael C J, Wiegmans, Adrian P, Shi, Wei, Cocciardi, Sibylle, McCart-Reed, Amy, Saunus, Jodi M, Simpson, Peter T, Grimmond, Sean M, Lakhani, Sunil R, Khanna, Kum Kum, Waddell, Nic, Al-Ejeh, Fares, Chenevix-Trench, Georgia
Published in PloS one (13.05.2015)
Published in PloS one (13.05.2015)
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Journal Article
Increased amphiregulin expression by CD4+ T cells from individuals with asymptomatic Leishmania donovani infection
Singh, Siddharth Sankar, Chauhan, Shashi Bhushan, Ng, Susanna SS, Corvino, Dillon, Labastida Rivera, Fabian, Engel, Jessica A, Waddell, Nic, Mukhopadhay, Pamela, Johnston, Rebecca L, Koufariotis, Lambros T, Nylen, Susanne, Prakash Singh, Om, Engwerda, Christian R, Kumar, Rajiv, Sundar, Shyam
Published in Clinical & translational immunology (2022)
Published in Clinical & translational immunology (2022)
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Journal Article
A workflow to increase verification rate of chromosomal structural rearrangements using high-throughput next-generation sequencing
Quek, Kelly, Nones, Katia, Patch, Ann-Marie, Fink, J. Lynn, Newell, Felicity, Cloonan, Nicole, Miller, David, Fadlullah, Muhammad Z. H, Kassahn, Karin, Christ, Angelika N, Bruxner, Timothy J. C, Manning, Suzanne, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Wani, Shivangi, Steptoe, Anita, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Wilson, Peter, Biankin, Andrew V, Pearson, John V, Waddell, Nic, Grimmond, Sean M
Published in BioTechniques (01.07.2014)
Published in BioTechniques (01.07.2014)
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Journal Article
Use of DNA-damaging agents and RNA pooling to assess expression profiles associated with BRCA1 and BRCA2 mutation status in familial breast cancer patients
Walker, Logan C, Thompson, Bryony A, Waddell, Nic, Grimmond, Sean M, Spurdle, Amanda B
Published in PLoS genetics (01.02.2010)
Published in PLoS genetics (01.02.2010)
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Journal Article
BRCA1 and BRCA2 missense variants of high and low clinical significance influence lymphoblastoid cell line post-irradiation gene expression
Waddell, Nic, Ten Haaf, Anette, Marsh, Anna, Johnson, Julie, Walker, Logan C, Gongora, Milena, Brown, Melissa, Grover, Piyush, Girolami, Mark, Grimmond, Sean, Chenevix-Trench, Georgia, Spurdle, Amanda B
Published in PLoS genetics (23.05.2008)
Published in PLoS genetics (23.05.2008)
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Journal Article
Tumor immunoevasion by the conversion of effector NK cells into type 1 innate lymphoid cells
Gao, Yulong, Souza-Fonseca-Guimaraes, Fernando, Bald, Tobias, Ng, Susanna S, Young, Arabella, Ngiow, Shin Foong, Rautela, Jai, Straube, Jasmin, Waddell, Nic, Blake, Stephen J, Yan, Juming, Bartholin, Laurent, Lee, Jason S, Vivier, Eric, Takeda, Kazuyoshi, Messaoudene, Meriem, Zitvogel, Laurence, Teng, Michele W L, Belz, Gabrielle T, Engwerda, Christian R, Huntington, Nicholas D, Nakamura, Kyohei, Hölzel, Michael, Smyth, Mark J
Published in Nature immunology (01.09.2017)
Published in Nature immunology (01.09.2017)
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Journal Article
PINA v2.0: mining interactome modules
Cowley, Mark J., Pinese, Mark, Kassahn, Karin S., Waddell, Nic, Pearson, John V., Grimmond, Sean M., Biankin, Andrew V., Hautaniemi, Sampsa, Wu, Jianmin
Published in Nucleic acids research (01.01.2012)
Published in Nucleic acids research (01.01.2012)
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