Modulating co-translational protein folding by rational design and ribosome engineering
Ahn, Minkoo, Włodarski, Tomasz, Mitropoulou, Alkistis, Chan, Sammy H. S., Sidhu, Haneesh, Plessa, Elena, Becker, Thomas A., Budisa, Nediljko, Waudby, Christopher A., Beckmann, Roland, Cassaignau, Anaïs M. E., Cabrita, Lisa D., Christodoulou, John
Published in Nature communications (22.07.2022)
Published in Nature communications (22.07.2022)
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Author Correction: Modulating co-translational protein folding by rational design and ribosome engineering
Ahn, Minkoo, Włodarski, Tomasz, Mitropoulou, Alkistis, Chan, Sammy H. S., Sidhu, Haneesh, Plessa, Elena, Becker, Thomas A., Budisa, Nediljko, Waudby, Christopher A., Beckmann, Roland, Cassaignau, Anaïs M. E., Cabrita, Lisa D., Christodoulou, John
Published in Nature communications (16.09.2022)
Published in Nature communications (16.09.2022)
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On Preventing and Detecting Cyber Attacks in Industrial Control System Networks
Padée, Adam, Wójcik, Michał, Ćwiek, Arkadiusz, Klimaszewski, Konrad, Kopka, Przemysław, Kozioł, Sylwester, Kuźnicki, Krzysztof, Możdżonek, Rafał, Wiślicki, Wojciech, Włodarski, Tomasz
Published in Journal of Telecommunications and Information Technology (01.07.2019)
Published in Journal of Telecommunications and Information Technology (01.07.2019)
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Bayesian reweighting of biomolecular structural ensembles using heterogeneous cryo-EM maps with the cryoENsemble method
Włodarski, Tomasz, Streit, Julian O., Mitropoulou, Alkistis, Cabrita, Lisa D., Vendruscolo, Michele, Christodoulou, John
Published in Scientific reports (05.08.2024)
Published in Scientific reports (05.08.2024)
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Interactions between nascent proteins and the ribosome surface inhibit co-translational folding
Cassaignau, Anaïs M. E., Włodarski, Tomasz, Chan, Sammy H. S., Woodburn, Lauren F., Bukvin, Ivana V., Streit, Julian O., Cabrita, Lisa D., Waudby, Christopher A., Christodoulou, John
Published in Nature chemistry (01.12.2021)
Published in Nature chemistry (01.12.2021)
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Common sequence motifs of nascent chains engage the ribosome surface and trigger factor
Deckert, Annika, Cassaignau, Anaïs M. E., Wang, Xiaolin, Włodarski, Tomasz, Chan, Sammy H. S., Waudby, Christopher A., Kirkpatrick, John P., Vendruscolo, Michele, Cabrita, Lisa D., Christodoulou, John
Published in Proceedings of the National Academy of Sciences - PNAS (28.12.2021)
Published in Proceedings of the National Academy of Sciences - PNAS (28.12.2021)
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A structural ensemble of a ribosome–nascent chain complex during cotranslational protein folding
Cabrita, Lisa D, Cassaignau, Anaïs M E, Launay, Hélène M M, Waudby, Christopher A, Wlodarski, Tomasz, Camilloni, Carlo, Karyadi, Maria-Evangelia, Robertson, Amy L, Wang, Xiaolin, Wentink, Anne S, Goodsell, Luke S, Woolhead, Cheryl A, Vendruscolo, Michele, Dobson, Christopher M, Christodoulou, John
Published in Nature structural & molecular biology (01.04.2016)
Published in Nature structural & molecular biology (01.04.2016)
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The ribosome stabilizes partially folded intermediates of a nascent multi-domain protein
Chan, Sammy H. S., Włodarski, Tomasz, Streit, Julian O., Cassaignau, Anaïs M. E., Woodburn, Lauren F., Ahn, Minkoo, Freiherr von Sass, Georg Johannes, Waudby, Christopher A., Budisa, Nediljko, Cabrita, Lisa D., Christodoulou, John
Published in Nature chemistry (01.10.2022)
Published in Nature chemistry (01.10.2022)
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The ribosome lowers the entropic penalty of protein folding
Streit, Julian O., Bukvin, Ivana V., Chan, Sammy H. S., Bashir, Shahzad, Woodburn, Lauren F., Włodarski, Tomasz, Figueiredo, Angelo Miguel, Jurkeviciute, Gabija, Sidhu, Haneesh K., Hornby, Charity R., Waudby, Christopher A., Cabrita, Lisa D., Cassaignau, Anaïs M. E., Christodoulou, John
Published in Nature (London) (05.09.2024)
Published in Nature (London) (05.09.2024)
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Nascent chain dynamics and ribosome interactions within folded ribosome-nascent chain complexes observed by NMR spectroscopy
Burridge, Charles, Waudby, Christopher A, W odarski, Tomasz, Cassaignau, Anaïs M. E, Cabrita, Lisa D, Christodoulou, John
Published in Chemical science (Cambridge) (13.10.2021)
Published in Chemical science (Cambridge) (13.10.2021)
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Structural characterization of the interaction of α-synuclein nascent chains with the ribosomal surface and trigger factor
Deckert, Annika, Waudby, Christopher A., Wlodarski, Tomasz, Wentink, Anne S., Wang, Xiaolin, Kirkpatrick, John P., Paton, Jack F. S., Camilloni, Carlo, Kukic, Predrag, Dobson, Christopher M., Vendruscolo, Michele, Cabrita, Lisa D., Christodoulou, John
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2016)
Published in Proceedings of the National Academy of Sciences - PNAS (03.05.2016)
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Comprehensive structural and substrate specificity classification of the Saccharomyces cerevisiae methyltransferome
Wlodarski, Tomasz, Kutner, Jan, Towpik, Joanna, Knizewski, Lukasz, Rychlewski, Leszek, Kudlicki, Andrzej, Rowicka, Maga, Dziembowski, Andrzej, Ginalski, Krzysztof
Published in PloS one (09.08.2011)
Published in PloS one (09.08.2011)
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Paramagnetic relaxation enhancement NMR reveals the structures and ribosome interactions of nascent chains during biosynthesis
Streit, Julian O., Bukvin, Ivana V., Hornby, Charity, Wlodarski, Tomasz, Sidhu, Haneesh, Waudby, Christopher A., Cabrita, Lisa D., Cassaignau, Anais M., Christodoulou, John
Published in Biophysical journal (11.02.2022)
Published in Biophysical journal (11.02.2022)
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Systematic mapping of free energy landscapes of a growing filamin domain during biosynthesis
Waudby, Christopher A., Wlodarski, Tomasz, Karyadi, Maria-Evangelia, Cassaignau, Anaïs M. E., Chan, Sammy H. S., Wentink, Anne S., Schmidt-Engler, Julian M., Camilloni, Carlo, Vendruscolo, Michele, Cabrita, Lisa D., Christodoulou, John
Published in Proceedings of the National Academy of Sciences - PNAS (25.09.2018)
Published in Proceedings of the National Academy of Sciences - PNAS (25.09.2018)
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Structures and Dynamics of Protein Folding on the Ribosome by NMR Spectroscopy
Cassaignau, Anais M., Waudby, Christopher, Wlodarski, Tomasz, Cabrita, Lisa, Christodoulou, John
Published in Biophysical journal (02.02.2018)
Published in Biophysical journal (02.02.2018)
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The Computational Studies of Co-Translational Protein Folding
Wlodarski, Tomasz, Waudby, Chris, Sammy, Chan, Vendruscolo, Michele, Christodoulou, John
Published in Biophysical journal (27.01.2015)
Published in Biophysical journal (27.01.2015)
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Structural Investigation of an Immunoglobulin Domain on the Ribosome using NMR Spectroscopy
Cassaignau, Anais M.E., Launay, Hélène M.M., Waudby, Christopher A., Wlodarski, Tomasz, Karyadi, Maria-Evangelia, Robertson, Amy L., Wang, Xiaolin, Camilloni, Carlo, Vendruscolo, Michele, Woolhead, Cheryl A., Cabrita, Lisa, Christodoulou, John
Published in Biophysical journal (03.02.2017)
Published in Biophysical journal (03.02.2017)
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