Pore formation in lipid membrane I: Continuous reversible trajectory from intact bilayer through hydrophobic defect to transversal pore
Akimov, Sergey A., Volynsky, Pavel E., Galimzyanov, Timur R., Kuzmin, Peter I., Pavlov, Konstantin V., Batishchev, Oleg V.
Published in Scientific reports (22.09.2017)
Published in Scientific reports (22.09.2017)
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PREDDIMER: a web server for prediction of transmembrane helical dimers
Polyansky, Anton A, Chugunov, Anton O, Volynsky, Pavel E, Krylov, Nikolay A, Nolde, Dmitry E, Efremov, Roman G
Published in Bioinformatics (15.03.2014)
Published in Bioinformatics (15.03.2014)
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The Conformation of the Epidermal Growth Factor Receptor Transmembrane Domain Dimer Dynamically Adapts to the Local Membrane Environment
Bocharov, Eduard V, Bragin, Pavel E, Pavlov, Konstantin V, Bocharova, Olga V, Mineev, Konstantin S, Polyansky, Anton A, Volynsky, Pavel E, Efremov, Roman G, Arseniev, Alexander S
Published in Biochemistry (Easton) (28.03.2017)
Published in Biochemistry (Easton) (28.03.2017)
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Spatial structure of TLR4 transmembrane domain in bicelles provides the insight into the receptor activation mechanism
Mineev, Konstantin S., Goncharuk, Sergey A., Goncharuk, Marina V., Volynsky, Pavel E., Novikova, Ekaterina V., Aresinev, Alexander S.
Published in Scientific reports (31.07.2017)
Published in Scientific reports (31.07.2017)
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Spatial Structure of the Dimeric Transmembrane Domain of the Growth Factor Receptor ErbB2 Presumably Corresponding to the Receptor Active State
Bocharov, Eduard V., Mineev, Konstantin S., Volynsky, Pavel E., Ermolyuk, Yaroslav S., Tkach, Elena N., Sobol, Alexander G., Chupin, Vladimir V., Kirpichnikov, Michail P., Efremov, Roman G., Arseniev, Alexander S.
Published in The Journal of biological chemistry (14.03.2008)
Published in The Journal of biological chemistry (14.03.2008)
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The Membrane-Water Partition Coefficients of Antifungal, but Not Antibacterial, Membrane-Active Compounds Are Similar
Volynsky, Pavel E., Smirnova, Alexandra I., Akimov, Sergey A., Sokolov, Svyatoslav S., Severin, Fedor F.
Published in Frontiers in microbiology (05.11.2021)
Published in Frontiers in microbiology (05.11.2021)
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Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1
Bocharov, Eduard V., Mayzel, Maxim L., Volynsky, Pavel E., Goncharuk, Marina V., Ermolyuk, Yaroslav S., Schulga, Alexey A., Artemenko, Elena O., Efremov, Roman G., Arseniev, Alexander S.
Published in The Journal of biological chemistry (24.10.2008)
Published in The Journal of biological chemistry (24.10.2008)
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Antimicrobial Peptides Induce Growth of Phosphatidylglycerol Domains in a Model Bacterial Membrane
Polyansky, Anton A, Ramaswamy, Rajesh, Volynsky, Pavel E, Sbalzarini, Ivo F, Marrink, Siewert J, Efremov, Roman G
Published in The journal of physical chemistry letters (21.10.2010)
Published in The journal of physical chemistry letters (21.10.2010)
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Unique Dimeric Structure of BNip3 Transmembrane Domain Suggests Membrane Permeabilization as a Cell Death Trigger
Bocharov, Eduard V., Pustovalova, Yulia E., Pavlov, Konstantin V., Volynsky, Pavel E., Goncharuk, Marina V., Ermolyuk, Yaroslav S., Karpunin, Dmitry V., Schulga, Alexey A., Kirpichnikov, Michail P., Efremov, Roman G., Maslennikov, Innokenty V., Arseniev, Alexander S.
Published in The Journal of biological chemistry (01.06.2007)
Published in The Journal of biological chemistry (01.06.2007)
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Journal Article
Effects of Sterols on the Interaction of SDS, Benzalkonium Chloride, and A Novel Compound, Kor105, with Membranes
Jiménez-Munguía, Irene, Volynsky, Pavel E, Batishchev, Oleg V, Akimov, Sergey A, Korshunova, Galina A, Smirnova, Ekaterina A, Knorre, Dmitry A, Sokolov, Sviatoslav S, Severin, Fedor F
Published in Biomolecules (Basel, Switzerland) (18.10.2019)
Published in Biomolecules (Basel, Switzerland) (18.10.2019)
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Cytostatic effects of structurally different ginsenosides on yeast cells with altered sterol biosynthesis and transport
Sokolov, Svyatoslav S., Volynsky, Pavel E., Zangieva, Olga T., Severin, Fedor F., Glagoleva, Elena S., Knorre, Dmitry A.
Published in Biochimica et biophysica acta. Biomembranes (01.10.2022)
Published in Biochimica et biophysica acta. Biomembranes (01.10.2022)
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Phospholipase A2 way to hydrolysis: Dint formation, hydrophobic mismatch, and lipid exclusion
Alekseeva, Anna S., Volynsky, Pavel E., Krylov, Nikolay A., Chernikov, Valery P., Vodovozova, Elena L., Boldyrev, Ivan A.
Published in Biochimica et biophysica acta. Biomembranes (01.01.2021)
Published in Biochimica et biophysica acta. Biomembranes (01.01.2021)
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HER2 Transmembrane Domain Dimerization Coupled with Self-Association of Membrane-Embedded Cytoplasmic Juxtamembrane Regions
Bragin, Pavel E., Mineev, Konstantin S., Bocharova, Olga V., Volynsky, Pavel E., Bocharov, Eduard V., Arseniev, Alexander S.
Published in Journal of molecular biology (16.01.2016)
Published in Journal of molecular biology (16.01.2016)
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Pyrenemethyl ara-Uridine-2′-carbamate: A Strong Interstrand Excimer in the Major Groove of a DNA Duplex
Dioubankova, Natalia N, Malakhov, Andrei D, Stetsenko, Dmitry A, Gait, Michael J, Volynsky, Pavel E, Efremov, Roman G, Korshun, Vladimir A
Published in Chembiochem : a European journal of chemical biology (05.09.2003)
Published in Chembiochem : a European journal of chemical biology (05.09.2003)
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All - d - Enantiomeric Peptide D3 Designed for Alzheimer's Disease Treatment Dynamically Interacts with Membrane-Bound Amyloid-β Precursors
Bocharov, Eduard V, Gremer, Lothar, Urban, Anatoly S, Okhrimenko, Ivan S, Volynsky, Pavel E, Nadezhdin, Kirill D, Bocharova, Olga V, Kornilov, Daniil A, Zagryadskaya, Yuliya A, Kamynina, Anna V, Kuzmichev, Pavel K, Kutzsche, Janine, Bolakhrif, Najoua, Müller-Schiffmann, Andreas, Dencher, Norbert A, Arseniev, Alexander S, Efremov, Roman G, Gordeliy, Valentin I, Willbold, Dieter
Published in Journal of medicinal chemistry (25.11.2021)
Published in Journal of medicinal chemistry (25.11.2021)
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