Instrument and process independent binning and baseline correction methods for liquid chromatography–high resolution-mass spectrometry deconvolution
Krishnan, Shaji, Vogels, Jack T.W.E., Coulier, Leon, Bas, Richard C., Hendriks, Margriet W.B., Hankemeier, Thomas, Thissen, Uwe
Published in Analytica chimica acta (31.08.2012)
Published in Analytica chimica acta (31.08.2012)
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Journal Article
Cross-species comparison of genes related to nutrient sensing mechanisms expressed along the intestine
van der Wielen, Nikkie, van Avesaat, Mark, de Wit, Nicole J W, Vogels, Jack T W E, Troost, Freddy, Masclee, Ad, Koopmans, Sietse-Jan, van der Meulen, Jan, Boekschoten, Mark V, Müller, Michael, Hendriks, Henk F J, Witkamp, Renger F, Meijerink, Jocelijn
Published in PloS one (2014)
Published in PloS one (2014)
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Journal Article
Equating, or Correction for Between-Block Effects with Application to Body Fluid LC−MS and NMR Metabolomics Data Sets
Draisma, Harmen H. M, Reijmers, Theo H, van der Kloet, Frans, Bobeldijk-Pastorova, Ivana, Spies-Faber, Elly, Vogels, Jack T. W. E, Meulman, Jacqueline J, Boomsma, Dorret I, van der Greef, Jan, Hankemeier, Thomas
Published in Analytical chemistry (Washington) (01.02.2010)
Published in Analytical chemistry (Washington) (01.02.2010)
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Journal Article
Visualization and identification of health space, based on personalized molecular phenotype and treatment response to relevant underlying biological processes
Bouwman, Jildau, Vogels, Jack Twe, Wopereis, Suzan, Rubingh, Carina M, Bijlsma, Sabina, Ommen, Ben van
Published in BMC medical genomics (06.01.2012)
Published in BMC medical genomics (06.01.2012)
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Journal Article
Evaluation of metabolite profiles as biomarkers for the pharmacological effects of thiazolidinediones in Type 2 diabetes mellitus patients and healthy volunteers
Van Doorn, Martijn, Vogels, Jack, Tas, Albert, Van Hoogdalem, Ewoud Jan, Burggraaf, Jacobus, Cohen, Adam, Van Der Greef, Jan
Published in British journal of clinical pharmacology (01.05.2007)
Published in British journal of clinical pharmacology (01.05.2007)
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Journal Article
Deconvolution using signal segmentation
Jellema, Renger H., Krishnan, Shaji, Hendriks, Margriet M.W.B., Muilwijk, Bas, Vogels, Jack T.W.E.
Published in Chemometrics and intelligent laboratory systems (01.11.2010)
Published in Chemometrics and intelligent laboratory systems (01.11.2010)
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Journal Article
Identification of Disease- and Nutrient-Related Metabolic Fingerprints in Osteoarthritic Guinea Pigs
Lamers, Robert-Jan A.N., Spies-Faber, Elly J., Jellema, Renger H., Spijksma, Gerwin K., Vogels, Jack T.W.E., van der Greef, Jan, van Nesselrooij, Joop H.J., DeGroot, Jeroen, Kraus, Virginia B., Verzijl, Nicole, TeKoppele, Johan M.
Published in The Journal of nutrition (01.06.2003)
Published in The Journal of nutrition (01.06.2003)
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Journal Article
Integrative biological analysis of the APOE3-leiden transgenic mouse
Clish, Clary B, Davidov, Eugene, Oresic, Matej, Plasterer, Thomas N, Lavine, Gary, Londo, Tom, Meys, Michael, Snell, Philip, Stochaj, Wayne, Adourian, Aram, Zhang, Xiang, Morel, Nicole, Neumann, Eric, Verheij, Elwin, Vogels, Jack T W E, Havekes, Louis M, Afeyan, Noubar, Regnier, Fred, van der Greef, Jan, Naylor, Stephen
Published in Omics (Larchmont, N.Y.) (2004)
Published in Omics (Larchmont, N.Y.) (2004)
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Journal Article
Uniform procedure of (1)H NMR analysis of rat urine and toxicometabonomics Part II: comparison of NMR profiles for classification of hepatotoxicity
Schoonen, Willem G E J, Kloks, Cathelijne P A M, Ploemen, Jan-Peter H T M, Smit, Martin J, Zandberg, Pieter, Horbach, G Jean, Mellema, Jan-Remt, Thijssen-Vanzuylen, Carol, Tas, Albert C, van Nesselrooij, Joop H J, Vogels, Jack T W E
Published in Toxicological sciences (01.07.2007)
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Published in Toxicological sciences (01.07.2007)
Journal Article
Detection of Adulteration in Orange Juices by a New Screening Method Using Proton NMR Spectroscopy in Combination with Pattern Recognition Techniques
Vogels, Jack T. W. E, Terwel, Loes, Tas, Albert C, van den Berg, Frans, Dukel, Fred, van der Greef, Jan
Published in Journal of agricultural and food chemistry (01.01.1996)
Published in Journal of agricultural and food chemistry (01.01.1996)
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Journal Article
Methods for the differential integrative omic analysis of plasma from a transgenic disease animal model
Davidov, Eugene, Clish, Clary B, Oresic, Matej, Meys, Michael, Stochaj, Wayne, Snell, Philip, Lavine, Gary, Londo, Thomas R, Adourian, Aram, Zhang, Xiang, Johnston, Mark, Morel, Nicole, Marple, Edward W, Plasterer, Thomas N, Neumann, Eric, Verheij, Elwin, Vogels, Jack T W E, Havekes, Louis M, van der Greef, Jan, Naylor, Stephen
Published in Omics (Larchmont, N.Y.) (2004)
Published in Omics (Larchmont, N.Y.) (2004)
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Journal Article
1H-NMR spectroscopy combined with pattern recognition analysis reveals characteristic chemical patterns in urines of MS patients and non-human primates with MS-like disease
't Hart, Bert A, Vogels, Jack T.W.E, Spijksma, Gerwin, Brok, Herbert P.M, Polman, Chris, van der Greef, Jan
Published in Journal of the neurological sciences (15.08.2003)
Published in Journal of the neurological sciences (15.08.2003)
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Journal Article
Relevance of bioaccumulating substances in the TTC concept
Leeman, Winfried R., Rouhani-Rankouhi, Tanja, Vogels, Jack, Krul, Lisette
Published in Regulatory toxicology and pharmacology (01.06.2016)
Published in Regulatory toxicology and pharmacology (01.06.2016)
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Journal Article
Integrated analysis of toxicity data of two pharmaceutical immunosuppressants and two environmental pollutants with immunomodulating properties to improve the understanding of side effects—A toxicopathologist׳s view
Kuper, C. Frieke, Vogels, Jack, Kemmerling, Jessica, Fehlert, Ellen, Rühl-Fehlert, Christine, Vohr, Hans-Werner, Krul, Cyrille
Published in European journal of pharmacology (15.07.2015)
Published in European journal of pharmacology (15.07.2015)
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Journal Article
The transferability from rat subacute 4-week oral toxicity study to translational research exemplified by two pharmaceutical immunosuppressants and two environmental pollutants with immunomodulating properties
Kemmerling, Jessica, Fehlert, Ellen, Kuper, C. Frieke, Rühl-Fehlert, Christine, Stropp, Gisela, Vogels, Jack, Krul, Cyrille, Vohr, Hans-Werner
Published in European journal of pharmacology (15.07.2015)
Published in European journal of pharmacology (15.07.2015)
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Journal Article
Proteome analysis reveals novel proteins associated with proliferation and differentiation of the colorectal cancer cell line Caco-2
Stierum, Rob, Gaspari, Marco, Dommels, Yvonne, Ouatas, Taoufik, Pluk, Helma, Jespersen, Sonja, Vogels, Jack, Verhoeckx, Kitty, Groten, John, Ommen, Ben van
Published in Biochimica et biophysica acta (21.08.2003)
Published in Biochimica et biophysica acta (21.08.2003)
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Journal Article
Non-invasive measurement of brain damage in a primate model of multiple sclerosis
't Hart, Bert A, Vogels, Jack, Bauer, Jan, Brok, Herbert P M, Blezer, Erwin
Published in Trends in molecular medicine (01.02.2004)
Published in Trends in molecular medicine (01.02.2004)
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Journal Article
Uniform Procedure of super(1)H NMR Analysis of Rat Urine and Toxicometabonomics Part II: Comparison of NMR Profiles for Classification of Hepatotoxicity
Schoonen, Willem GEJ, Kloks, Cathelijne PAM, Ploemen, Jan-Peter HTM, Smit, Martin J, Zandberg, Pieter, Horbach, GJean, Mellema, Jan-Remt, Thijssen-vanZuylen, Carol, Tas, Albert C, van Nesselrooij, Joop HJ, Vogels, Jack TWE
Published in Toxicological sciences (01.07.2007)
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Published in Toxicological sciences (01.07.2007)
Journal Article
Sensitivity of super(1)H NMR Analysis of Rat Urine in Relation to Toxicometabonomics. Part I: Dose-Dependent Toxic Effects of Bromobenzene and Paracetamol
Schoonen, Willem GEJ, Kloks, Cathelijne PAM, Ploemen, Jan-Peter HTM, Horbach, GJean, Smit, Martin J, Zandberg, Pieter, Mellema, Jan-Remt, Zuylen, Carol Thijssen-van, Tas, Albert C, van Nesselrooij, Joop HJ, Vogels, Jack TWE
Published in Toxicological sciences (01.07.2007)
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Published in Toxicological sciences (01.07.2007)
Journal Article
Sensitivity of (1)H NMR analysis of rat urine in relation to toxicometabonomics. Part I: dose-dependent toxic effects of bromobenzene and paracetamol
Schoonen, Willem G E J, Kloks, Cathelijne P A M, Ploemen, Jan-Peter H T M, Horbach, G Jean, Smit, Martin J, Zandberg, Pieter, Mellema, Jan-Remt, Zuylen, Carol Thijssen-van, Tas, Albert C, van Nesselrooij, Joop H J, Vogels, Jack T W E
Published in Toxicological sciences (01.07.2007)
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Published in Toxicological sciences (01.07.2007)
Journal Article