Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers
Subach, Oksana M, Vlaskina, Anna V, Agapova, Yulia K, Nikolaeva, Alena Y, Anokhin, Konstantin V, Piatkevich, Kiryl D, Patrushev, Maxim V, Boyko, Konstantin M, Subach, Fedor V
Published in International journal of molecular sciences (07.02.2023)
Published in International journal of molecular sciences (07.02.2023)
Get full text
Journal Article
Bright and stable monomeric green fluorescent protein derived from StayGold
Zhang, Hanbin, Lesnov, Gleb D., Subach, Oksana M., Zhang, Wenhao, Kuzmicheva, Tatyana P., Vlaskina, Anna V., Samygina, Valeriya R., Chen, Liangyi, Ye, Xianxin, Nikolaeva, Alena Yu, Gabdulkhakov, Azat, Papadaki, Stavrini, Qin, Wenming, Borshchevskiy, Valentin, Perfilov, Maxim M., Gavrikov, Alexey S., Drobizhev, Mikhail, Mishin, Alexander S., Piatkevich, Kiryl D., Subach, Fedor V.
Published in Nature methods (01.04.2024)
Published in Nature methods (01.04.2024)
Get full text
Journal Article
Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein
Subach, Oksana M, Sotskov, Vladimir P, Plusnin, Viktor V, Gruzdeva, Anna M, Barykina, Natalia V, Ivashkina, Olga I, Anokhin, Konstantin V, Nikolaeva, Alena Y, Korzhenevskiy, Dmitry A, Vlaskina, Anna V, Lazarenko, Vladimir A, Boyko, Konstantin M, Rakitina, Tatiana V, Varizhuk, Anna M, Pozmogova, Galina E, Podgorny, Oleg V, Piatkevich, Kiryl D, Boyden, Edward S, Subach, Fedor V
Published in International journal of molecular sciences (28.02.2020)
Published in International journal of molecular sciences (28.02.2020)
Get full text
Journal Article
FNCaMP, ratiometric green calcium indicator based on mNeonGreen protein
Subach, Oksana M., Varfolomeeva, Larisa, Vlaskina, Anna V., Agapova, Yulia K., Nikolaeva, Alena Y., Piatkevich, Kiryl D., Patrushev, Maxim V., Boyko, Konstantin M., Subach, Fedor V.
Published in Biochemical and biophysical research communications (12.07.2023)
Published in Biochemical and biophysical research communications (12.07.2023)
Get full text
Journal Article
LSSmScarlet2 and LSSmScarlet3, Chemically Stable Genetically Encoded Red Fluorescent Proteins with a Large Stokes’ Shift
Subach, Oksana M., Vlaskina, Anna V., Agapova, Yulia K., Piatkevich, Kiryl D., Patrushev, Maxim V., Samygina, Valeriya R., Subach, Fedor V.
Published in International journal of molecular sciences (21.09.2022)
Published in International journal of molecular sciences (21.09.2022)
Get full text
Journal Article
Combined Structural and Computational Study of the mRubyFT Fluorescent Timer Locked in Its Blue Form
Boyko, Konstantin M, Khrenova, Maria G, Nikolaeva, Alena Y, Dorovatovskii, Pavel V, Vlaskina, Anna V, Subach, Oksana M, Popov, Vladimir O, Subach, Fedor V
Published in International journal of molecular sciences (26.04.2023)
Published in International journal of molecular sciences (26.04.2023)
Get full text
Journal Article
LSSmScarlet, dCyRFP2s, dCyOFP2s and CRISPRed2s, Genetically Encoded Red Fluorescent Proteins with a Large Stokes Shift
Subach, Oksana M, Vlaskina, Anna V, Agapova, Yuliya K, Dorovatovskii, Pavel V, Nikolaeva, Alena Y, Ivashkina, Olga I, Popov, Vladimir O, Piatkevich, Kiryl D, Khrenova, Maria G, Smirnova, Tatiana A, Boyko, Konstantin M, Subach, Fedor V
Published in International journal of molecular sciences (28.11.2021)
Published in International journal of molecular sciences (28.11.2021)
Get full text
Journal Article
cNTnC and fYTnC2, Genetically Encoded Green Calcium Indicators Based on Troponin C from Fast Animals
Subach, Oksana M, Vlaskina, Anna V, Agapova, Yuliya K, Korzhenevskiy, Dmitriy A, Nikolaeva, Alena Y, Varizhuk, Anna M, Subach, Maksim F, Patrushev, Maxim V, Piatkevich, Kiryl D, Boyko, Konstantin M, Subach, Fedor V
Published in International journal of molecular sciences (23.11.2022)
Published in International journal of molecular sciences (23.11.2022)
Get full text
Journal Article
An Algorithm for the Development of a Recombinant Antiherpetic Subunit Vaccine Combining the Crystal Structure Analysis, AlphaFold2-Based Modeling, and Immunoinformatics
Rakitina, Tatiana V, Smirnova, Evgeniya V, Podshivalov, David D, Timofeev, Vladimir I, Komolov, Aleksandr S, Vlaskina, Anna V, Gaeva, Tatiana N, Vasilov, Raif G, Dyakova, Yulia A, Kovalchuk, Mikhail V
Published in Crystals (Basel) (01.09.2023)
Published in Crystals (Basel) (01.09.2023)
Get full text
Journal Article
FGCaMP7, an Improved Version of Fungi-Based Ratiometric Calcium Indicator for In Vivo Visualization of Neuronal Activity
Barykina, Natalia V, Sotskov, Vladimir P, Gruzdeva, Anna M, Wu, You Kure, Portugues, Ruben, Subach, Oksana M, Chefanova, Elizaveta S, Plusnin, Viktor V, Ivashkina, Olga I, Anokhin, Konstantin V, Vlaskina, Anna V, Korzhenevskiy, Dmitry A, Nikolaeva, Alena Y, Boyko, Konstantin M, Rakitina, Tatiana V, Varizhuk, Anna M, Pozmogova, Galina E, Subach, Fedor V
Published in International journal of molecular sciences (24.04.2020)
Published in International journal of molecular sciences (24.04.2020)
Get full text
Journal Article
FRCaMP, a Red Fluorescent Genetically Encoded Calcium Indicator Based on Calmodulin from Schizosaccharomyces Pombe Fungus
Subach, Oksana M, Barykina, Natalia V, Chefanova, Elizaveta S, Vlaskina, Anna V, Sotskov, Vladimir P, Ivashkina, Olga I, Anokhin, Konstantin V, Subach, Fedor V
Published in International journal of molecular sciences (24.12.2020)
Published in International journal of molecular sciences (24.12.2020)
Get full text
Journal Article
The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer
Subach, Oksana M, Tashkeev, Aleksandr, Vlaskina, Anna V, Petrenko, Dmitry E, Gaivoronskii, Filipp A, Nikolaeva, Alena Y, Ivashkina, Olga I, Anokhin, Konstantin V, Popov, Vladimir O, Boyko, Konstantin M, Subach, Fedor V
Published in International journal of molecular sciences (16.03.2022)
Published in International journal of molecular sciences (16.03.2022)
Get full text
Journal Article
Web Resource
Comparison of histone-like HU protein DNA-binding properties and HU/IHF protein sequence alignment
Kamashev, Dmitri, Agapova, Yulia, Rastorguev, Sergey, Talyzina, Anna A, Boyko, Konstantin M, Korzhenevskiy, Dmitry A, Vlaskina, Anna, Vasilov, Raif, Timofeev, Vladimir I, Rakitina, Tatiana V
Published in PloS one (13.11.2017)
Published in PloS one (13.11.2017)
Get full text
Journal Article
Structure-based inhibitors targeting the alpha-helical domain of the Spiroplasma melliferum histone-like HU protein
Agapova, Yuliya K., Altukhov, Dmitry A., Timofeev, Vladimir I., Stroylov, Victor S., Mityanov, Vitaly S., Korzhenevskiy, Dmitry A., Vlaskina, Anna V., Smirnova, Eugenia V., Bocharov, Eduard V., Rakitina, Tatiana V.
Published in Scientific reports (15.09.2020)
Published in Scientific reports (15.09.2020)
Get full text
Journal Article
Targeted Modification of Mammalian DNA by a Novel Type V Cas12a Endonuclease from Ruminococcus bromii
Vasilev, Ruslan, Gunitseva, Natalia, Shebanova, Regina, Korzhenkov, Aleksei, Vlaskina, Anna, Evteeva, Marta, Polushkina, Irina, Nikitchina, Natalia, Toshchakov, Stepan, Kamenski, Piotr, Patrushev, Maxim, Mazunin, Ilya
Published in International journal of molecular sciences (18.08.2022)
Published in International journal of molecular sciences (18.08.2022)
Get full text
Journal Article
Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation
Britikov, Vladimir, Timofeev, Vladimir, Petrenko, Dmitry, Britikova, Elena, Nikolaeva, Alena, Vlaskina, Anna, Boyko, Konstantin, Mikhailova, Anna, Rakitina, Tatiana
Published in Crystals (Basel) (01.05.2022)
Published in Crystals (Basel) (01.05.2022)
Get full text
Journal Article
Self-Assembly and Conformational Change in the Oligomeric Structure of the Ectodomain of the TBEV E Protein Studied via X-ray, Small-Angle X-ray Scattering, and Molecular Dynamics
Konarev, Petr V, Vlaskina, Anna V, Korzhenevskiy, Dmitry, Rakitina, Tatiana V, Petrenko, Dmitry, Agapova, Yulia, Kordonskaya, Yulia, Samygina, Valeriya R
Published in Crystals (Basel) (01.12.2023)
Published in Crystals (Basel) (01.12.2023)
Get full text
Journal Article
The Crystal Structure of Nα-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding
Timofeev, Vladimir, Petrenko, Dmitry, Agapova, Yulia, Vlaskina, Anna, Karlinsky, David, Mikhailova, Anna, Kuranova, Inna, Rakitina, Tatiana
Published in Crystals (Basel) (01.11.2021)
Published in Crystals (Basel) (01.11.2021)
Get full text
Journal Article
YTnC2 , an improved genetically encoded green calcium indicator based on toadfish troponin C
Subach, Oksana M., Vlaskina, Anna V., Agapova, Yulia K., Nikolaeva, Alena Y., Varizhuk, Anna M., Podgorny, Oleg V., Piatkevich, Kiryl D., Patrushev, Maxim V., Boyko, Konstantin M., Subach, Fedor V.
Published in FEBS open bio (01.11.2023)
Published in FEBS open bio (01.11.2023)
Get full text
Journal Article
First Crystal Structure of Bacterial Oligopeptidase B in an Intermediate State: The Roles of the Hinge Region Modification and Spermine
Petrenko, Dmitry E., Timofeev, Vladimir I., Britikov, Vladimir V., Britikova, Elena V., Kleymenov, Sergey Y., Vlaskina, Anna V., Kuranova, Inna P., Mikhailova, Anna G., Rakitina, Tatiana V.
Published in Biology (Basel, Switzerland) (09.10.2021)
Published in Biology (Basel, Switzerland) (09.10.2021)
Get full text
Journal Article