Aging and neurodegeneration are associated with increased mutations in single human neurons
Lodato, Michael A, Rodin, Rachel E, Bohrson, Craig L, Coulter, Michael E, Barton, Alison R, Kwon, Minseok, Sherman, Maxwell A, Vitzthum, Carl M, Luquette, Lovelace J, Yandava, Chandri N, Yang, Pengwei, Chittenden, Thomas W, Hatem, Nicole E, Ryu, Steven C, Woodworth, Mollie B, Park, Peter J, Walsh, Christopher A
Published in Science (American Association for the Advancement of Science) (02.02.2018)
Published in Science (American Association for the Advancement of Science) (02.02.2018)
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Journal Article
The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data
Reiff, Sarah B., Schroeder, Andrew J., Kırlı, Koray, Cosolo, Andrea, Bakker, Clara, Mercado, Luisa, Lee, Soohyun, Veit, Alexander D., Balashov, Alexander K., Vitzthum, Carl, Ronchetti, William, Pitman, Kent M., Johnson, Jeremy, Ehmsen, Shannon R., Kerpedjiev, Peter, Abdennur, Nezar, Imakaev, Maxim, Öztürk, Serkan Utku, Çamoğlu, Uğur, Mirny, Leonid A., Gehlenborg, Nils, Alver, Burak H., Park, Peter J.
Published in Nature communications (02.05.2022)
Published in Nature communications (02.05.2022)
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Journal Article
Author Correction: The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data
Reiff, Sarah B., Schroeder, Andrew J., Kırlı, Koray, Cosolo, Andrea, Bakker, Clara, Mercado, Luisa, Lee, Soohyun, Veit, Alexander D., Balashov, Alexander K., Vitzthum, Carl, Ronchetti, William, Pitman, Kent M., Johnson, Jeremy, Ehmsen, Shannon R., Kerpedjiev, Peter, Abdennur, Nezar, Imakaev, Maxim, Öztürk, Serkan Utku, Çamoğlu, Uğur, Mirny, Leonid A., Gehlenborg, Nils, Alver, Burak H., Park, Peter J.
Published in Nature communications (02.11.2022)
Published in Nature communications (02.11.2022)
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Journal Article
Developmental expression of Kv1 voltage-gated potassium channels in the avian hypothalamus
Doczi, Megan A., Vitzthum, Carl M., Forehand, Cynthia J.
Published in Neuroscience letters (11.03.2016)
Published in Neuroscience letters (11.03.2016)
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Journal Article
Pairs and Pairix: a file format and a tool for efficient storage and retrieval for Hi-C read pairs
Lee, Soohyun, Bakker, Clara R, Vitzthum, Carl, Alver, Burak H, Park, Peter J
Published in Bioinformatics (04.03.2022)
Published in Bioinformatics (04.03.2022)
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Journal Article
Tibanna: software for scalable execution of portable pipelines on the cloud
Lee, Soohyun, Johnson, Jeremy, Vitzthum, Carl, Kırlı, Koray, Alver, Burak H, Park, Peter J
Published in Bioinformatics (01.11.2019)
Published in Bioinformatics (01.11.2019)
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Journal Article
PaSD-qc: quality control for single cell whole-genome sequencing data using power spectral density estimation
Sherman, Maxwell A, Barton, Alison R, Lodato, Michael A, Vitzthum, Carl, Coulter, Michael E, Walsh, Christopher A, Park, Peter J
Published in Nucleic acids research (28.02.2018)
Published in Nucleic acids research (28.02.2018)
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Journal Article
Exposure to the lampricide 3-trifluoromethyl-4-nitrophenol results in increased expression of carbohydrate transporters in S. cerevisiae
Hinkle, Karen L., Anderson, Chad C., Forkey, Blake, Griffin, Jacob, Cone, Kelsey, Vitzthum, Carl, Olsen, Darlene
Published in Environmental toxicology and chemistry (29.03.2016)
Published in Environmental toxicology and chemistry (29.03.2016)
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Journal Article
Exposure to the lampricide 3-trifluoromethyl-4-nitrophenol results in increased expression of carbohydrate transporters in Saccharomyces cerevisiae
Hinkle, Karen L., Anderson, Chad C., Forkey, Blake, Griffin, Jacob, Cone, Kelsey, Vitzthum, Carl, Olsen, Darlene
Published in Environmental toxicology and chemistry (01.07.2016)
Published in Environmental toxicology and chemistry (01.07.2016)
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Journal Article
Tibanna: software for scalable execution of portable pipelines on the cloud
Lee, Soohyun, Johnson, Jeremy, Vitzthum, Carl, Kırlı, Koray, Alver, Burak H, Park, Peter J
Published in bioRxiv (29.04.2019)
Published in bioRxiv (29.04.2019)
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Paper
The 4D Nucleome Data Portal: a resource for searching and visualizing curated nucleomics data
Reiff, Sarah B, Schroeder, Andrew J, Kirli, Koray, Cosolo, Andrea, Bakker, Clara, Mercado, Luisa, Lee, Soohyun B, Veit, Alexander D, Balashov, Alexander K, Vitzthum, Carl, Ronchetti, William, Pitman, Kent M, Johnson, Jeremy, Ehmsen, Shannon R, Kerpedjiev, Peter, Abdennur, Nezar Alexander, Imakaev, Maxim, Serkan Utku Ozturk, Camoglu, Ugur, Mirny, Leonid, Gehlenborg, Nils, Alver, Burak H, Park, Peter J
Published in bioRxiv (15.10.2021)
Published in bioRxiv (15.10.2021)
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