Catalytic Coupling of Oxidative Phosphorylation, ATP Demand, and Reactive Oxygen Species Generation
Bazil, Jason N., Beard, Daniel A., Vinnakota, Kalyan C.
Published in Biophysical journal (23.02.2016)
Published in Biophysical journal (23.02.2016)
Get full text
Journal Article
Identifying functional metabolic shifts in heart failure with the integration of omics data and a heart-specific, genome-scale model
Dougherty, Bonnie V., Rawls, Kristopher D., Kolling, Glynis L., Vinnakota, Kalyan C., Wallqvist, Anders, Papin, Jason A.
Published in Cell reports (Cambridge) (09.03.2021)
Published in Cell reports (Cambridge) (09.03.2021)
Get full text
Journal Article
Analysis of the Kinetics and Bistability of Ubiquinol:Cytochrome c Oxidoreductase
Bazil, Jason N., Vinnakota, Kalyan C., Wu, Fan, Beard, Daniel A.
Published in Biophysical journal (16.07.2013)
Published in Biophysical journal (16.07.2013)
Get full text
Journal Article
Determination of the Catalytic Mechanism for Mitochondrial Malate Dehydrogenase
Dasika, Santosh K., Vinnakota, Kalyan C., Beard, Daniel A.
Published in Biophysical journal (20.01.2015)
Published in Biophysical journal (20.01.2015)
Get full text
Journal Article
Open-Loop Control of Oxidative Phosphorylation in Skeletal and Cardiac Muscle Mitochondria by Ca2
Vinnakota, Kalyan C., Singhal, Abhishek, Van den Bergh, Françoise, Bagher-Oskouei, Masoumeh, Wiseman, Robert W., Beard, Daniel A.
Published in Biophysical journal (23.02.2016)
Published in Biophysical journal (23.02.2016)
Get full text
Journal Article
Identification of the Catalytic Mechanism and Estimation of Kinetic Parameters for Fumarase
Mescam, Muriel, Vinnakota, Kalyan C., Beard, Daniel A.
Published in The Journal of biological chemistry (17.06.2011)
Published in The Journal of biological chemistry (17.06.2011)
Get full text
Journal Article
Network Modeling of Liver Metabolism to Predict Plasma Metabolite Changes During Short-Term Fasting in the Laboratory Rat
Vinnakota, Kalyan C, Pannala, Venkat R, Wall, Martha L, Rahim, Mohsin, Estes, Shanea K, Trenary, Irina, O'Brien, Tracy P, Printz, Richard L, Reifman, Jaques, Shiota, Masakazu, Young, Jamey D, Wallqvist, Anders
Published in Frontiers in physiology (01.03.2019)
Published in Frontiers in physiology (01.03.2019)
Get full text
Journal Article
Predicting changes in renal metabolism after compound exposure with a genome-scale metabolic model
Rawls, Kristopher D., Dougherty, Bonnie V., Vinnakota, Kalyan C., Pannala, Venkat R., Wallqvist, Anders, Kolling, Glynis L., Papin, Jason A.
Published in Toxicology and applied pharmacology (01.02.2021)
Published in Toxicology and applied pharmacology (01.02.2021)
Get full text
Journal Article
Genome-Scale Characterization of Toxicity-Induced Metabolic Alterations in Primary Hepatocytes
Rawls, Kristopher D, Blais, Edik M, Dougherty, Bonnie V, Vinnakota, Kalyan C, Pannala, Venkat R, Wallqvist, Anders, Kolling, Glynis L, Papin, Jason A
Published in Toxicological sciences (01.12.2019)
Published in Toxicological sciences (01.12.2019)
Get full text
Journal Article
Mechanistic identification of biofluid metabolite changes as markers of acetaminophen-induced liver toxicity in rats
Pannala, Venkat R., Vinnakota, Kalyan C., Rawls, Kristopher D., Estes, Shanea K., O'Brien, Tracy P., Printz, Richard L., Papin, Jason A., Reifman, Jaques, Shiota, Masakazu, Young, Jamey D., Wallqvist, Anders
Published in Toxicology and applied pharmacology (01.06.2019)
Published in Toxicology and applied pharmacology (01.06.2019)
Get full text
Journal Article
Open-Loop Control of Oxidative Phosphorylation in Skeletal and Cardiac Muscle Mitochondria by Ca(2.)
Vinnakota, Kalyan C, Singhal, Abhishek, Van den Bergh, Françoise, Bagher-Oskouei, Masoumeh, Wiseman, Robert W, Beard, Daniel A
Published in Biophysical journal (23.02.2016)
Published in Biophysical journal (23.02.2016)
Get full text
Journal Article
Metabolic network-based predictions of toxicant-induced metabolite changes in the laboratory rat
Pannala, Venkat R., Wall, Martha L., Estes, Shanea K., Trenary, Irina, O’Brien, Tracy P., Printz, Richard L., Vinnakota, Kalyan C., Reifman, Jaques, Shiota, Masakazu, Young, Jamey D., Wallqvist, Anders
Published in Scientific reports (03.08.2018)
Published in Scientific reports (03.08.2018)
Get full text
Journal Article
Genome-Scale Model-Based Identification of Metabolite Indicators for Early Detection of Kidney Toxicity
Pannala, Venkat R, Vinnakota, Kalyan C, Estes, Shanea K, Trenary, Irina, OˈBrien, Tracy P, Printz, Richard L, Papin, Jason A, Reifman, Jaques, Oyama, Tatsuya, Shiota, Masakazu, Young, Jamey D, Wallqvist, Anders
Published in Toxicological sciences (01.02.2020)
Published in Toxicological sciences (01.02.2020)
Get full text
Journal Article