Suppression of TH17 differentiation and autoimmunity by a synthetic ROR ligand
SOLT, Laura A, KUMAR, Naresh, SCHÜRER, Stephan C, JIHONG XU, WAGONER, Gail, DREW, Paul D, GRIFFIN, Patrick R, BURRIS, Thomas P, NUHANT, Philippe, YONGJUN WANG, LAUER, Janelle L, JIN LIU, ISTRATE, Monica A, KAMENECKA, Theodore M, ROUSH, William R, VIDOVIC, Dušica
Published in Nature (London) (17.04.2011)
Published in Nature (London) (17.04.2011)
Get full text
Journal Article
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data
Koleti, Amar, Terryn, Raymond, Stathias, Vasileios, Chung, Caty, Cooper, Daniel J, Turner, John P, Vidović, Dušica, Forlin, Michele, Kelley, Tanya T, D'Urso, Alessandro, Allen, Bryce K, Torre, Denis, Jagodnik, Kathleen M, Wang, Lily, Jenkins, Sherry L, Mader, Christopher, Niu, Wen, Fazel, Mehdi, Mahi, Naim, Pilarczyk, Marcin, Clark, Nicholas, Shamsaei, Behrouz, Meller, Jarek, Vasiliauskas, Juozas, Reichard, John, Medvedovic, Mario, Ma'ayan, Avi, Pillai, Ajay, Schürer, Stephan C
Published in Nucleic acids research (04.01.2018)
Published in Nucleic acids research (04.01.2018)
Get full text
Journal Article
LINCS Data Portal 2.0: next generation access point for perturbation-response signatures
Stathias, Vasileios, Turner, John, Koleti, Amar, Vidovic, Dusica, Cooper, Daniel, Fazel-Najafabadi, Mehdi, Pilarczyk, Marcin, Terryn, Raymond, Chung, Caty, Umeano, Afoma, Clarke, Daniel J B, Lachmann, Alexander, Evangelista, John Erol, Ma’ayan, Avi, Medvedovic, Mario, Schürer, Stephan C
Published in Nucleic acids research (08.01.2020)
Published in Nucleic acids research (08.01.2020)
Get full text
Journal Article
TCRD and Pharos 2021: mining the human proteome for disease biology
Sheils, Timothy K, Mathias, Stephen L, Kelleher, Keith J, Siramshetty, Vishal B, Nguyen, Dac-Trung, Bologa, Cristian G, Jensen, Lars Juhl, Vidović, Dušica, Koleti, Amar, Schürer, Stephan C, Waller, Anna, Yang, Jeremy J, Holmes, Jayme, Bocci, Giovanni, Southall, Noel, Dharkar, Poorva, Mathé, Ewy, Simeonov, Anton, Oprea, Tudor I
Published in Nucleic Acids Research (08.01.2021)
Published in Nucleic Acids Research (08.01.2021)
Get full text
Journal Article
Web Resource
Pharos: Collating protein information to shed light on the druggable genome
Nguyen, Dac-Trung, Mathias, Stephen, Bologa, Cristian, Brunak, Soren, Fernandez, Nicolas, Gaulton, Anna, Hersey, Anne, Holmes, Jayme, Jensen, Lars Juhl, Karlsson, Anneli, Liu, Guixia, Ma'ayan, Avi, Mandava, Geetha, Mani, Subramani, Mehta, Saurabh, Overington, John, Patel, Juhee, Rouillard, Andrew D, Schürer, Stephan, Sheils, Timothy, Simeonov, Anton, Sklar, Larry A, Southall, Noel, Ursu, Oleg, Vidovic, Dusica, Waller, Anna, Yang, Jeremy, Jadhav, Ajit, Oprea, Tudor I, Guha, Rajarshi
Published in Nucleic acids research (04.01.2017)
Published in Nucleic acids research (04.01.2017)
Get full text
Journal Article
Antidiabetic actions of a non-agonist PPARγ ligand blocking Cdk5-mediated phosphorylation
JANG HYUN CHOI, BANKS, Alexander S, MARCIANO, David P, CAMERON, Michael D, LAZNIK, Dina, JURCZAK, Michael J, SCHÜRER, Stephan C, VIDOVIC, Dusica, SHULMAN, Gerald I, SPIEGELMAN, Bruce M, GRIFFIN, Patrick R, KAMENECKA, Theodore M, BUSBY, Scott A, CHALMERS, Michael J, KUMAR, Naresh, KURUVILLA, Dana S, SHIN, Youseung, YUANJUN HE, BRUNING, John B
Published in Nature (London) (04.09.2011)
Published in Nature (London) (04.09.2011)
Get full text
Journal Article
Pharos 2023: an integrated resource for the understudied human proteome
Kelleher, Keith J, Sheils, Timothy K, Mathias, Stephen L, Yang, Jeremy J, Metzger, Vincent T, Siramshetty, Vishal B, Nguyen, Dac-Trung, Jensen, Lars Juhl, Vidović, Dušica, Schürer, Stephan C, Holmes, Jayme, Sharma, Karlie R, Pillai, Ajay, Bologa, Cristian G, Edwards, Jeremy S, Mathé, Ewy A, Oprea, Tudor I
Published in Nucleic acids research (06.01.2023)
Published in Nucleic acids research (06.01.2023)
Get full text
Journal Article
Relationships between SARS-CoV‑2 in Wastewater and COVID-19 Clinical Cases and Hospitalizations, with and without Normalization against Indicators of Human Waste
Zhan, Qingyu, Babler, Kristina M., Sharkey, Mark E., Amirali, Ayaaz, Beaver, Cynthia C., Boone, Melinda M., Comerford, Samuel, Cooper, Daniel, Cortizas, Elena M., Currall, Benjamin B., Foox, Jonathan, Grills, George S., Kobetz, Erin, Kumar, Naresh, Laine, Jennifer, Lamar, Walter E., Mantero, Alejandro M.A., Mason, Christopher E., Reding, Brian D., Robertson, Maria, Roca, Matthew A., Ryon, Krista, Schürer, Stephan C., Shukla, Bhavarth S., Solle, Natasha Schaefer, Stevenson, Mario, Tallon Jr, John J., Thomas, Collette, Thomas, Tori, Vidović, Dušica, Williams, Sion L., Yin, Xue, Solo-Gabriele, Helena M.
Published in ACS ES&T water (11.11.2022)
Published in ACS ES&T water (11.11.2022)
Get full text
Journal Article
Detection of the clinically persistent, pathogenic yeast spp. Candida auris from hospital and municipal wastewater in Miami-Dade County, Florida
Babler, Kristina, Sharkey, Mark, Arenas, Sebastian, Amirali, Ayaaz, Beaver, Cynthia, Comerford, Samuel, Goodman, Kenneth, Grills, George, Holung, Michelle, Kobetz, Erin, Laine, Jennifer, Lamar, Walter, Mason, Christopher, Pronty, Darryl, Reding, Brian, Schürer, Stephan, Schaefer Solle, Natasha, Stevenson, Mario, Vidović, Dusica, Solo-Gabriele, Helena, Shukla, Bhavarth
Published in The Science of the total environment (10.11.2023)
Published in The Science of the total environment (10.11.2023)
Get full text
Journal Article
Degradation rates influence the ability of composite samples to represent 24-hourly means of SARS-CoV-2 and other microbiological target measures in wastewater
Babler, Kristina M., Sharkey, Mark E., Abelson, Samantha, Amirali, Ayaaz, Benitez, Aymara, Cosculluela, Gabriella A., Grills, George S., Kumar, Naresh, Laine, Jennifer, Lamar, Walter, Lamm, Erik D., Lyu, Jiangnan, Mason, Christopher E., McCabe, Philip M., Raghavender, Joshi, Reding, Brian D., Roca, Matthew A., Schürer, Stephan C., Stevenson, Mario, Szeto, Angela, Tallon, John J., Vidović, Dusica, Zarnegarnia, Yalda, Solo-Gabriele, Helena M.
Published in The Science of the total environment (01.04.2023)
Published in The Science of the total environment (01.04.2023)
Get full text
Journal Article
Connecting omics signatures and revealing biological mechanisms with iLINCS
Pilarczyk, Marcin, Fazel-Najafabadi, Mehdi, Kouril, Michal, Shamsaei, Behrouz, Vasiliauskas, Juozas, Niu, Wen, Mahi, Naim, Zhang, Lixia, Clark, Nicholas A., Ren, Yan, White, Shana, Karim, Rashid, Xu, Huan, Biesiada, Jacek, Bennett, Mark F., Davidson, Sarah E., Reichard, John F., Roberts, Kurt, Stathias, Vasileios, Koleti, Amar, Vidovic, Dusica, Clarke, Daniel J. B., Schürer, Stephan C., Ma’ayan, Avi, Meller, Jarek, Medvedovic, Mario
Published in Nature communications (09.08.2022)
Published in Nature communications (09.08.2022)
Get full text
Journal Article
Monkeypox viral nucleic acids detected using both DNA and RNA extraction workflows
Sharkey, Mark E., Babler, Kristina M., Shukla, Bhavarth S., Abelson, Samantha M., Alsuliman, Bader, Amirali, Ayaaz, Comerford, Samuel, Grills, George S., Kumar, Naresh, Laine, Jennifer, Lee, Jisue, Lamar, Walter E., Mason, Christopher E., Penso, Johnathon, Reding, Brian D., Schürer, Stephan C., Stevenson, Mario, Vidović, Dušica, Solo-Gabriele, Helena M.
Published in The Science of the total environment (10.09.2023)
Published in The Science of the total environment (10.09.2023)
Get full text
Journal Article
piNET: a versatile web platform for downstream analysis and visualization of proteomics data
Shamsaei, Behrouz, Chojnacki, Szymon, Pilarczyk, Marcin, Najafabadi, Mehdi, Niu, Wen, Chen, Chuming, Ross, Karen, Matlock, Andrea, Muhlich, Jeremy, Chutipongtanate, Somchai, Zheng, Jie, Turner, John, Vidović, Dušica, Jaffe, Jake, MacCoss, Michael, Wu, Cathy, Pillai, Ajay, Ma’ayan, Avi, Schürer, Stephan, Kouril, Michal, Medvedovic, Mario, Meller, Jarek
Published in Nucleic acids research (02.07.2020)
Published in Nucleic acids research (02.07.2020)
Get full text
Journal Article
Unexplored therapeutic opportunities in the human genome
Oprea, Tudor I, Bologa, Cristian G, Brunak, Søren, Campbell, Allen, Gan, Gregory N, Gaulton, Anna, Gomez, Shawn M, Guha, Rajarshi, Hersey, Anne, Holmes, Jayme, Jadhav, Ajit, Jensen, Lars Juhl, Johnson, Gary L, Karlson, Anneli, Leach, Andrew R, Ma'ayan, Avi, Malovannaya, Anna, Mani, Subramani, Mathias, Steven L, McManus, Michael T, Meehan, Terrence F, von Mering, Christian, Muthas, Daniel, Nguyen, Dac-Trung, Overington, John P, Papadatos, George, Qin, Jun, Reich, Christian, Roth, Bryan L, Schürer, Stephan C, Simeonov, Anton, Sklar, Larry A, Southall, Noel, Tomita, Susumu, Tudose, Ilinca, Ursu, Oleg, Vidovic, Dušica, Waller, Anna, Westergaard, David, Yang, Jeremy J, Zahoránszky-Köhalmi, Gergely
Published in Nature reviews. Drug discovery (01.05.2018)
Published in Nature reviews. Drug discovery (01.05.2018)
Get full text
Journal Article
Wastewater based surveillance can be used to reduce clinical testing intensity on a university campus
Amirali, Ayaaz, Babler, Kristina M., Sharkey, Mark E., Beaver, Cynthia C., Boone, Melinda M., Comerford, Samuel, Cooper, Daniel, Currall, Benjamin B., Goodman, Kenneth W., Grills, George S., Kobetz, Erin, Kumar, Naresh, Laine, Jennifer, Lamar, Walter E., Mason, Christopher E., Reding, Brian D., Roca, Matthew A., Ryon, Krista, Schürer, Stephan C., Shukla, Bhavarth S., Solle, Natasha Schaefer, Stevenson, Mario, Tallon, John J., Vidović, Dušica, Williams, Sion L., Yin, Xue, Solo-Gabriele, Helena M.
Published in The Science of the total environment (25.03.2024)
Published in The Science of the total environment (25.03.2024)
Get full text
Journal Article
TIN-X version 3: update with expanded dataset and modernized architecture for enhanced illumination of understudied targets
Metzger, Vincent T., Cannon, Daniel C., Yang, Jeremy J., Mathias, Stephen L., Bologa, Cristian G., Waller, Anna, Schürer, Stephan C., Vidović, Dušica, Kelleher, Keith J., Sheils, Timothy K., Jensen, Lars Juhl, Lambert, Christophe G., Oprea, Tudor I., Edwards, Jeremy S.
Published in PeerJ (San Francisco, CA) (25.06.2024)
Published in PeerJ (San Francisco, CA) (25.06.2024)
Get full text
Journal Article
Metadata Standard and Data Exchange Specifications to Describe, Model, and Integrate Complex and Diverse High-Throughput Screening Data from the Library of Integrated Network-based Cellular Signatures (LINCS)
Vempati, Uma D, Chung, Caty, Mader, Chris, Koleti, Amar, Datar, Nakul, Vidović, Dušica, Wrobel, David, Erickson, Sean, Muhlich, Jeremy L, Berriz, Gabriel, Benes, Cyril H, Subramanian, Aravind, Pillai, Ajay, Shamu, Caroline E, Schürer, Stephan C
Published in Journal of biomolecular screening (01.06.2014)
Published in Journal of biomolecular screening (01.06.2014)
Get full text
Journal Article
Multiscale mapping of transcriptomic signatures for cardiotoxic drugs
Hansen, Jens, Xiong, Yuguang, Siddiq, Mustafa M, Dhanan, Priyanka, Hu, Bin, Shewale, Bhavana, Yadaw, Arjun S, Jayaraman, Gomathi, Tolentino, Rosa E, Chen, Yibang, Martinez, Pedro, Beaumont, Kristin G, Sebra, Robert, Vidovic, Dusica, Schürer, Stephan C, Goldfarb, Joseph, Gallo, James M, Birtwistle, Marc R, Sobie, Eric A, Azeloglu, Evren U, Berger, Seth I, Chan, Angel, Schaniel, Christoph, Dubois, Nicole C, Iyengar, Ravi
Published in Nature communications (11.09.2024)
Published in Nature communications (11.09.2024)
Get full text
Journal Article
Comparison of Electronegative Filtration to Magnetic Bead-Based Concentration and V2G-qPCR to RT-qPCR for Quantifying Viral SARS-CoV‑2 RNA from Wastewater
Babler, Kristina M., Amirali, Ayaaz, Sharkey, Mark E., Williams, Sion L., Boone, Melinda M., Cosculluela, Gabriella A., Currall, Benjamin B., Grills, George S., Laine, Jennifer, Mason, Christopher E., Reding, Brian D., Schürer, Stephan C., Stevenson, Mario, Vidović, Dušica, Solo-Gabriele, Helena M.
Published in ACS ES&T water (11.11.2022)
Published in ACS ES&T water (11.11.2022)
Get full text
Journal Article